Sequence details NCBI ID: XM_004860807.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmc6
Gene Name transmembrane channel-like 6, transcript variant X7
Entrez Gene ID 101696330

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMC6 ENSCPOG00000000461 (Guinea pig)

Gene Details

transmembrane channel-like 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000408, Guinea pig)

Protein Percentage 84.34%
CDS Percentage 86.76%
Ka/Ks Ratio 0.14589 (Ka = 0.0869, Ks = 0.5953)

TMC6 ENSG00000141524 (Human)

Gene Details

transmembrane channel-like 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000465261, Human)

Protein Percentage 77.96%
CDS Percentage 81.86%
Ka/Ks Ratio 0.12502 (Ka = 0.1305, Ks = 1.0437)

Tmc6 ENSMUSG00000025572 (Mouse)

Gene Details

transmembrane channel-like gene family 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026659, Mouse)

Protein Percentage 78.66%
CDS Percentage 79.46%
Ka/Ks Ratio 0.10436 (Ka = 0.1253, Ks = 1.2002)

Tmc6 ENSRNOG00000045950 (Rat)

Gene Details

transmembrane channel-like gene family 6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067647, Rat)

Protein Percentage 58.44%
CDS Percentage 64.79%
Ka/Ks Ratio 0.12036 (Ka = 0.3259, Ks = 2.708)

Genome Location

Sequence Coding sequence

Length: 2418 bp    Location: 7654482..7643372   Strand: -
Raw sequence   
>XM_004860807.1
ATGTGGACCGCAGTGATGGCCCAGCAGCTTGCCTTAGTTCTCGATGTCCCTGAGACCCCAGGGGACCAGGACCTGGAGCTCAGCCCCTACGAGGAGAGTGAGGTACACGACTCCTTCCATCAGCTCATTCAGGAGCAGAGCCGGTGGGTGGCTGAGGAGGGCCTGGAGCTGCAGCAGGTGGCCGGAGACTTGGGAGCCCCAGCCAGTGGTCACCAGACCCTCCTGGAGCCCGAGGGTGGCCCTGTCTACAGCACGGCCACTCTCAGCATCCTGGCCAGCATGCCCAGTCGCACCATTGGCCGCAGCCGAGGGGCCATCATCTCGAAGTACTACAACCACACCGTCCGCCTGCGGCGGCGGCACAGCGGCAGCCGGCCCATCCTCGGGCCTGTGGTGTGCTCTGCCCGGCCCAGCCTCCGCCTGTACGACCTGGAGCTGGACCCTGCAGACCTGGAGGAAGAGGAGAAGTGGAGCCTCCTGGTGAAGGAGCTCCAGGGCCTGCCAGTGGCCCAGCGGGACCACATGCTCCGGGGGATGCCCTTGAGCCTACAGGAGAAGCGCGTCCTGCGAGAGAAGAGCCGGACTCCGAGGGGGAAGCAGAGGGGCCGCCAGGGCCATGGTGGGGTCTTCTGCTGCAGCCAGCTCCGATACACCTGTGTCCTGGCCCTACACAGCCTGGGGCTGGTGCTGCTCACCTGCCTGCATGCCTTGAGGCCTTGGCGCTATGCCCTGAAGCAAATCGGAGGCCAGTTTGGCTCCAGCGTGCTCTCCTACTTCCTCTTCCTCAAGACCCTGCTGGCCTTCAACATGCTGCTACTGCTGCCACTGGTGGCCTTCCTGGTGGCCGTGCAGGCTGCCTTCACACCTGAGGCGCACCCTGCCCCGACCTGCACAGGGCTGGAGCTCCTCACAGGCGGGGGCTGCTTCACCCACACCGTCATGTACTATGGATACTACAGTAACACCACGCTGAACACGCCGTGTGGCCCCCTGCAGTGTGGCCCCAGAGCAGGCAGCCTGCCCTACAGTATGCCCCTGGCCTACCTCTTCACTGTAGGCGCAGCCTTCTTCATCACCTGCATCACCCTGGTGTACAGCATGTCCCACTCTTTCGGGGAGAGCTACCGGGTGGGCAGCACCAAGGGTATCCACGCCATCACTGTCTTTTGCTCCTGGGACTACAAGGTGACCCAGAATTGGGCCTCCCGCCTCCAGAGGGACAACATCTGCACCCAGCTGAAGGAGCTGCTGGCTGAGTGGCGGCTGTGCAAGGGTTCCCAGAGCACGTGTGGGCGGCTGCGGCGGGCAGCCGTGCTGGCCCTGGTGTGGCTGCTGTCCCTGGCGGCAGTGCTGGGCTGTGCAGTGGCCGTCCTCACCTTCTCTGAGCTCAGGATCCAGAGCCCTGTGGTGGCCGACCAGGAGGCAGGGCTGCTGGTGCTGCCCCTGGTCATCTGCCTCCTCAACCTGGGCGCCCCCTACCTCTTCCGCGGCCTGGCCACCCTGGAGCGGCACGACTCCCCAGTGCTGGAGGTGTACGTGGCGATCGGCAGGAACCTTGTCCTCAAGACGGCCATCCTGGGTGTGCTCTGCTACCACTGGCTGGGCCGCAGGGTGGCCACCCTGCAGGGCCGGTGCTGGGAGGACTTTGTGGGCCAGGAGCTGTACCGGTTCATGGTGATGGACTTCATCTTTGCGCTTCTTGACTCCCTTTTTGGGGAGCTGGTATGGAGGCTCATCTCGGAGAGGAGACTCAGGGGGAAGCCCGAGTTTGACATCGCGAGGAATGTGCTGGACCTCATTTATGGGCAGACCCTGACCTGGCTGGGTGTCCTCTTCTCGCCCCTGCTGCCTGCTGTGCAGATCCTCAGGCTGCTGATCCTCTTCCAGGTCAAGAAGGCGAGCCTGATGGCCAACTGCCAGGCACCGCGCAGGCCCTGGCTGGCATCGCACATGAGCACCGTCTTCCTCACACTGCTCTGCTTCCCCTCCTTCCTGGGTGCCGCTGTTTTCCTGTGCTATGCTGTCTGGCAAGTGAAGCCCTCGGACACCTGCGGCCCTTTCCGGAGCCTGGACACCATGTACGAGGCGGGCACCGTGTGGGTGCGGCACCTGGAGCAGGTGGGCCCTGGGGGCTCGTGGCTGTCCTGGCTGCACCGGTACCTGGTAGAGAACACCTTCTTCCTCTTCCTGGCATCGGCCCTGCTGCTGGCCGTCATCTACCTCAACATCCAGGTGGTGAAAGGCCAGCGGAAGGTCATCTGCCTCCTCAAGGAGCAGATCCGAAATGAAGGGGAGGACAAAATCTTCTTGATCAACAGGCTTCACTCTGTCTATGAGAGGAAGGAGAGGAGGAGAGCCCGGCAGCCAGCTCCTGGCCCTGCCTTTCTGCCTTCATGGCACCATCCCTCCCTGAGGTAA

Related Sequences

XP_004860864.1 Protein

Tmc6 PREDICTED: transmembrane channel-like protein 6 isoform X7 [Heterocephalus glaber]

Length: 805 aa      View alignments
>XP_004860864.1
MWTAVMAQQLALVLDVPETPGDQDLELSPYEESEVHDSFHQLIQEQSRWVAEEGLELQQVAGDLGAPASGHQTLLEPEGGPVYSTATLSILASMPSRTIGRSRGAIISKYYNHTVRLRRRHSGSRPILGPVVCSARPSLRLYDLELDPADLEEEEKWSLLVKELQGLPVAQRDHMLRGMPLSLQEKRVLREKSRTPRGKQRGRQGHGGVFCCSQLRYTCVLALHSLGLVLLTCLHALRPWRYALKQIGGQFGSSVLSYFLFLKTLLAFNMLLLLPLVAFLVAVQAAFTPEAHPAPTCTGLELLTGGGCFTHTVMYYGYYSNTTLNTPCGPLQCGPRAGSLPYSMPLAYLFTVGAAFFITCITLVYSMSHSFGESYRVGSTKGIHAITVFCSWDYKVTQNWASRLQRDNICTQLKELLAEWRLCKGSQSTCGRLRRAAVLALVWLLSLAAVLGCAVAVLTFSELRIQSPVVADQEAGLLVLPLVICLLNLGAPYLFRGLATLERHDSPVLEVYVAIGRNLVLKTAILGVLCYHWLGRRVATLQGRCWEDFVGQELYRFMVMDFIFALLDSLFGELVWRLISERRLRGKPEFDIARNVLDLIYGQTLTWLGVLFSPLLPAVQILRLLILFQVKKASLMANCQAPRRPWLASHMSTVFLTLLCFPSFLGAAVFLCYAVWQVKPSDTCGPFRSLDTMYEAGTVWVRHLEQVGPGGSWLSWLHRYLVENTFFLFLASALLLAVIYLNIQVVKGQRKVICLLKEQIRNEGEDKIFLINRLHSVYERKERRRARQPAPGPAFLPSWHHPSLR