Sequence details NCBI ID: XM_004860758.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rhbdf2
Gene Name rhomboid 5 homolog 2 (Drosophila)
Entrez Gene ID 101714240

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RHBDF2 ENSCPOG00000009889 (Guinea pig)

Gene Details

rhomboid 5 homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008873, Guinea pig)

Protein Percentage 94.78%
CDS Percentage 93.04%
Ka/Ks Ratio 0.06719 (Ka = 0.0232, Ks = 0.346)

RHBDF2 ENSG00000129667 (Human)

Gene Details

rhomboid 5 homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000322775, Human)

Protein Percentage 91.38%
CDS Percentage 90.25%
Ka/Ks Ratio 0.06417 (Ka = 0.0378, Ks = 0.5898)

Rhbdf2 ENSMUSG00000020806 (Mouse)

Gene Details

rhomboid 5 homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099317, Mouse)

Protein Percentage 90.77%
CDS Percentage 87.81%
Ka/Ks Ratio 0.05571 (Ka = 0.0433, Ks = 0.778)

Rhbdf2 ENSRNOG00000011459 (Rat)

Gene Details

rhomboid 5 homolog 2 (Drosophila) (Rhbdf2), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060138, Rat)

Protein Percentage 86.87%
CDS Percentage 84.51%
Ka/Ks Ratio 0.07143 (Ka = 0.0703, Ks = 0.9847)

Genome Location

Sequence Coding sequence

Length: 2475 bp    Location: 6357226..6335007   Strand: -
Raw sequence   
>XM_004860758.1
ATGGCCTCAGCTGACAAGAATGGTGGGAGTCTCTCCTCTGTGTCCAGCAGCCGCCTGCAGAGCCGGAAGCCGCCCAACCTGTCTATCAGCATCCCACCACCCGAAGCCCAGGCCCCCAGCAAGCAGGACAGGATGACCCCCCAGAGGCCCAAGAACCCTACCTACATGAAAAGCGTCAGCCTCCAGGAGCCGCAGGGACGATGGCAAGATGGTACAGAGAAGCGGCCTGGCTTCCGCCGCCAGGCCTCCCTGTCCCAGAGCATCCGCAAGGGCACGGCCCAGTGGTTCGGGGTCAGCGGCGACTGGGAGGGCAAGCGGCAGCACTGGCAGCGCCGCAGCCTGCACCACTGCAGCGTGCGCTATGGCCGGCTCAAGGCCGCATGCCAGAGGGACCTGGAGCTGCCCAGCCAGGAGGGGCTGTCCTTCCAGGGCACCGAGTCTCCAAAACCCTGCAAGATGCCCAAGATTGTGGATCCGCTGGCCCGGGGCCGGGCCTTCCGCCATCCAGACGAGGTAGACCGGCCCCACGCCCCCCACCCGCCGCTGACTCCCGGGGTCCTGTCCCTCACCTCCTTCACCAGCATCCGCTCTGGCTACCTGCCCCACCGAAAGAGGATATCCGTGGCCCACATGAGCTTCCAGGCTGCGGCCGCCCTCCTCAAGGGGCGCTCAGTGCTGGACGCTACTGGACAACGGTGCCAGGTGATCAAACGCAGCTTTGCCTACCCCAGCTTCCTGGAGGAGGATGCAGTCGATGGGGCAGACACCTTTGACTCCTCCTTTTTTAGTAAGGAAGAAATGAGCTCCATGCCCGATGATGTGTTTGAGTCTCCCCCACTCTCTGCCAGCTATTTCCGAGCGATGCCACTTTCAGCCTCCTCAGCCTCCCCCGACGGGGTGCACATCCCTCTGAAGGAGTGTGGCCACACCCCCATCCCAGTGACCCGGCGCGGCAAGCGCATTGCCTCCACCGTGAAGCACTTTGCCTTCGACAGGAAGAAGCGGCACTACGGCCTGGGTGTGGTGGGCAACTGGCTCAACCGCAGCTACCGCCGCAGCATCAGCAGCACGGTGCAGCGGCAGCTGGAGAGCTTCGACAGCCACCGGCCCTACTTCACCTACTGGCTGACCTTCGTCCACATCATCATCACGCTGCTGGTGATCTGCACGTATGGCATCGCACCCGTGGGCTTTGCCCAGCACGTCACCACCCAGCTGGTGCTGAGGAACAAAGGTGTGTACGAGAGCGTGAAGTTCATCCAGCAGGAGAACTTCTGGGTCGGCCCCAGCTCGATGGACCTGATTCACTTGGGGGCCAAATTCTCCCCCTGCATCCGGAAGGACCAGCAGATCGAGCAGCTAGTGCGGCGGGAGTGGGACCTAGAGCGCGACTCAGGCTGCTGTGTCCAGAATGACCGCTCGGGTTGCATCCAGACCCAGAGGAAGGACTGCTCGGAGACTTTGGCCACTTTTGTCAAGTGGCAGGATGATACTGGGCCCCCCATGGACAAGTCTGATCTCGGCCAGAGGCGGACGTCGGGGGCTGTGTGCAACCAGGACCCCAGGACCTGTGAGGAGCCAGCCTCCAGTGGTGCCCACATCTGGCCCGACGACATCACCAAGTGGCCGATCTGCACAGAACAGGCCAGGAGCAACCACACAGGCTTCTTGCACATAGACTGCATGATCAAGGGTCGCCCCTGCTGCATTGGCACCAAGGGCAGCTGTGAGATTACCACTCGGGAGTACTGTGAGTTCATGCATGGCTATTTCCATGAAGAGGCGACGCTCTGTTCCCAGGTGCACTGCTTGGACCAAGTGTGCGGGCTGCTGCCCTTCCTCAACCCTGAGATCCCAGACCAGTTCTACAGGCTCTGGCTGTCTCTCTTCCTCCACGCTGGCTTGGTGCACTGCCTTGTGTCTGTGATCTTCCAAATGACCATCCTGCGTGACCTGGAGAAGCTGGCTGGCTGGCACCGCATTGCTATCATCTTCGTCCTCAGCGGCATCACGGGCAACCTTGCCAGCGCCATCTTCCTCCCTTACCGGGCAGAGGTGGGCCCGGCTGGGTCACAGTTTGGCCTCCTTGCCTGCCTCTTCGTGGAGCTCTTCCAGAGCTGGCAGCTGCTGGAGCGGCCCTGGAAGGCCTTTTTCAACCTGTCAGCCATTGTGCTCTTCCTGTTCGTCTGCGGCCTCTTGCCCTGGATCGACAACATCGCCCACATCTTCGGCTTCCTTAGCGGCATGCTGCTGGCCTTCGCCTTCCTGCCTTACATCACCTTCGGTACCAGCGACAAGTACCGCAAGCGTGCGCTCATCCTGGTGTCGCTGCTGGTCTTCGCCGGCCTCTTTGCCTCCCTGGTCCTCTGGCTCTATATCTACCCCATCAACTGGCCCTGGATTGAGTACCTCACCTGCTTTCCCTTCACCAGCCACTTCTGCGAGAAGTACGAGCTGGACCAGGTGCTGCACTGA

Related Sequences

XP_004860815.1 Protein

Rhbdf2 PREDICTED: inactive rhomboid protein 2 [Heterocephalus glaber]

Length: 824 aa      View alignments
>XP_004860815.1
MASADKNGGSLSSVSSSRLQSRKPPNLSISIPPPEAQAPSKQDRMTPQRPKNPTYMKSVSLQEPQGRWQDGTEKRPGFRRQASLSQSIRKGTAQWFGVSGDWEGKRQHWQRRSLHHCSVRYGRLKAACQRDLELPSQEGLSFQGTESPKPCKMPKIVDPLARGRAFRHPDEVDRPHAPHPPLTPGVLSLTSFTSIRSGYLPHRKRISVAHMSFQAAAALLKGRSVLDATGQRCQVIKRSFAYPSFLEEDAVDGADTFDSSFFSKEEMSSMPDDVFESPPLSASYFRAMPLSASSASPDGVHIPLKECGHTPIPVTRRGKRIASTVKHFAFDRKKRHYGLGVVGNWLNRSYRRSISSTVQRQLESFDSHRPYFTYWLTFVHIIITLLVICTYGIAPVGFAQHVTTQLVLRNKGVYESVKFIQQENFWVGPSSMDLIHLGAKFSPCIRKDQQIEQLVRREWDLERDSGCCVQNDRSGCIQTQRKDCSETLATFVKWQDDTGPPMDKSDLGQRRTSGAVCNQDPRTCEEPASSGAHIWPDDITKWPICTEQARSNHTGFLHIDCMIKGRPCCIGTKGSCEITTREYCEFMHGYFHEEATLCSQVHCLDQVCGLLPFLNPEIPDQFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFVCGLLPWIDNIAHIFGFLSGMLLAFAFLPYITFGTSDKYRKRALILVSLLVFAGLFASLVLWLYIYPINWPWIEYLTCFPFTSHFCEKYELDQVLH