Details from NCBI annotation

Gene Symbol Trim65
Gene Name tripartite motif containing 65, transcript variant X1
Entrez Gene ID 101702138

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM65 ENSCPOG00000015130 (Guinea pig)

Gene Details

tripartite motif containing 65

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013639, Guinea pig)

Protein Percentage 79.96%
CDS Percentage 86.45%
Ka/Ks Ratio 0.29975 (Ka = 0.1097, Ks = 0.3659)

TRIM65 ENSG00000141569 (Human)

Gene Details

tripartite motif containing 65

External Links

Gene Match (Ensembl Protein ID: ENSP00000269383, Human)

Protein Percentage 73.24%
CDS Percentage 81.12%
Ka/Ks Ratio 0.25023 (Ka = 0.1568, Ks = 0.6267)

Trim65 ENSMUSG00000054517 (Mouse)

Gene Details

tripartite motif-containing 65

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000063410, Mouse)

Protein Percentage 64.47%
CDS Percentage 74.76%
Ka/Ks Ratio 0.26033 (Ka = 0.2335, Ks = 0.8969)

Trim65 ENSRNOG00000024145 (Rat)

Gene Details

tripartite motif-containing protein 65

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047932, Rat)

Protein Percentage 63.5%
CDS Percentage 73.59%
Ka/Ks Ratio 0.24963 (Ka = 0.2462, Ks = 0.9864)

Genome Location

Sequence Coding sequence

Length: 1548 bp    Location: 5783938..5779166   Strand: -
>XM_004860719.1
ATGGCCGCGGAGCTGCTGCGAGACAGGCTGACCTGCTCCATCTGCCTAGGACTCTACCAGGACCCGGTGACGCTGCCTTGCGGCCACAACTTCTGCGCGGCCTGCATCAGGAGCTCGCGGCGCTGCTGCGAGAAGGCGTGCCCCGAGTGCCGCGCGCCCTTCCCCGACGGCGCCGAGCCGTGCCGCAACGTGGCGCTCAGCGGGGTGCTGGAGGTGCTGCAGCTCGCCGTCCGGGAGCCCGGCCCCGAGCCCCGCGCCGCTGCGCGCTGCCCCCGCCATGGCCGGCCGCTCGAGCTCTTCTGCCGCACCGAGGGCCGCTGCGTGTGCGGGGAGTGCACAGTGCACGAGTGCCGCCTCCACGAGCGGGCGCTGTTGGAAGCCGAGCGCCGCGAACGCGAGGCCCAGCTGAGAGCCAAGCTGGAGGTCACCCAGCAGCAGGCCACTCAGGCCCACACCCAGCTCCAAGAGCTCCAGCAGCAAAAGAGCCAGATCCAGAACTCTGCCTGCAACCTGGCCTCGGTGGTCTCAGGAAAGTTTAGCTGCCTGCTGCAGGCCCTGGAGTTGCGTCGGATCTCAGCACAAAGGGACATCGAGGCAGCCCAGACACAAGCGCTGGCACCAGCCCTGGATGAGGAGCAGCGGCTGAGGGGCCACCTGGAGGCCCTGGCTCAATATGGCCAGAGGGTCCAGGGCCTCCTGGAGCAGGTGGATGACCAGACCTTCCTCCAGGATTTGCAGCAGCTCTCTGAGCCCCCAGGACCCTTTGGACCACTGACTCCCCTGCAGTGGGATGAAGACAAACAGCTGGGCAACCTGAAGGAATTGCTAAGCCTGCTGAGTGGCCTCCTCCTGGAAGAGGGGGCCCCTGCCACAGTGCCAGCCAGGGCTCCTGACTTGGTCCCCCTGAAGGCCCCAGATCCTGAGGCACAGGTCCCGAGCATGGTGTGTCCACTGAGGAAGAAGCTCTGGCAGAATTATCGAAATTTGACCTTTGATCCGGACAGTGCTAACCGCCACTTCAGCCTTTCCTGCCAGGACCAGCGGGTGACGCACTGTCGCAGGTCTCAGGGCCCAGCCCGGCTGGGCAGCTTCGAGCTCTGGCAGGTGCAGTGTACCCAGAGCTTCCGGGTGGGGCACCATTACTGGGAGGTGCGCACCTCCGACCACTCTGTGACTCTGGGTGTTGCCTACTCCGAACTGACTCGACAGAAGCTGGGAACCAACACGGACAACATTGGCCGGGAGTCCTGCTCCTGGGGCCTCTGCATCCAGGCGGACAGTGTCCTGGCCCGGCACAACGGGGACTCCTGGCGCCTCCCCAGGGTGTCTGCACGGCTCCTGGGCATTGATTTGGACCTGGCCTGTGGCTGCCTTGCGTTCTACAGCCTGGAGCCACAGGTCCAGCTCCTGCACACCTTCCATGCCCTCTTCACCCGGCCCCTCTACCCAGTCTTCTGGCTCCTGGAGGGGAGGACCCTCACCCTGTGCCATCAGCCTGGGGCCAAGCTCCCTCCAGCGCCGCAGGAAGCAGCCTCAGCGCTCCATTGA

Related Sequences

XP_004860776.1 Protein

Trim65 PREDICTED: tripartite motif-containing protein 65 isoform X1 [Heterocephalus glaber]

Length: 515 aa      View alignments
>XP_004860776.1
MAAELLRDRLTCSICLGLYQDPVTLPCGHNFCAACIRSSRRCCEKACPECRAPFPDGAEPCRNVALSGVLEVLQLAVREPGPEPRAAARCPRHGRPLELFCRTEGRCVCGECTVHECRLHERALLEAERREREAQLRAKLEVTQQQATQAHTQLQELQQQKSQIQNSACNLASVVSGKFSCLLQALELRRISAQRDIEAAQTQALAPALDEEQRLRGHLEALAQYGQRVQGLLEQVDDQTFLQDLQQLSEPPGPFGPLTPLQWDEDKQLGNLKELLSLLSGLLLEEGAPATVPARAPDLVPLKAPDPEAQVPSMVCPLRKKLWQNYRNLTFDPDSANRHFSLSCQDQRVTHCRRSQGPARLGSFELWQVQCTQSFRVGHHYWEVRTSDHSVTLGVAYSELTRQKLGTNTDNIGRESCSWGLCIQADSVLARHNGDSWRLPRVSARLLGIDLDLACGCLAFYSLEPQVQLLHTFHALFTRPLYPVFWLLEGRTLTLCHQPGAKLPPAPQEAASALH