Details from NCBI annotation

Gene Symbol Trim47
Gene Name tripartite motif containing 47
Entrez Gene ID 101701787

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM47 ENSCPOG00000010668 (Guinea pig)

Gene Details

tripartite motif containing 47

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009574, Guinea pig)

Protein Percentage 89.03%
CDS Percentage 89.55%
Ka/Ks Ratio 0.16211 (Ka = 0.0592, Ks = 0.3649)

TRIM47 ENSG00000132481 (Human)

Gene Details

tripartite motif containing 47

External Links

Gene Match (Ensembl Protein ID: ENSP00000254816, Human)

Protein Percentage 89.18%
CDS Percentage 87.51%
Ka/Ks Ratio 0.08502 (Ka = 0.054, Ks = 0.6346)

Trim47 ENSMUSG00000020773 (Mouse)

Gene Details

tripartite motif-containing 47

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021120, Mouse)

Protein Percentage 90.6%
CDS Percentage 85.32%
Ka/Ks Ratio 0.05094 (Ka = 0.0479, Ks = 0.9395)

Trim47 ENSRNOG00000008215 (Rat)

Gene Details

tripartite motif-containing 47 (Trim47), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010887, Rat)

Protein Percentage 90.75%
CDS Percentage 86.15%
Ka/Ks Ratio 0.05721 (Ka = 0.0463, Ks = 0.81)

Genome Location

Sequence Coding sequence

Length: 1917 bp    Location: 5765782..5761590   Strand: -
>XM_004860718.1
ATGGACGGCAGCGGGCCCTTTAGCTGCCCCATATGCCTGGAGCCGCTCCGGGAGCCCGTGACGCTGCCCTGCGGCCACAACTTCTGCCTCGCCTGCCTGGGCGCGCTCTGGCCGCACCGTAGCGCGGGCGGAGCGGGCGGCTCGGGAGGGGCGGCCCGCTGCCCGCTGTGCCAGGAGCCCTTCCCCGACGGCCTGCAGCTCCGCAAGAACCACACGCTGTCCGAGTTGCTGCAGCTCCGCCAGGGCTCCGGACCCGGACCCATGCCCAACCCGCCCCGGGGCCCGACGCCAGAGCCCTCGGCGCCCAGCGCGCCGCCCAGCGCCCCGGAGCCGTCGGCCCCCTGCGCGCCCCAGCCGTGGCCTTCGGGAGAAGAGCCGGTGCACTGCGACGCGTGTCCCGAGGGCGCGGCCCTGCCCGCGGCGCTCTCCTGCCTCACCTGCCTCGCTTCCTTCTGCCCCGCACACCTGGGCCCGCACGAGCGCAGCCCGGCCCTGCGCGGGCACCGCCTGGTGCCACCGCTGCGCCGGCTGGAGGAGAGCTTGTGCCCGCGTCACCTGCGGCCTCTGGAGCGCTACTGCCGCGCTGAGCGCGTGTGCTTGTGTGAGACCTGCGCCGCCCAGGACCACCGGGGGCACGAGCTCGTGTCGCTAGAGCAGGAGCGCGCGCTCCAGGAGGCTGAGCAGCCCAAAGTCCTGAGCGCTGTGGAGGACCGCATAGATGAGCTGGGTGCCAGCATCGCTCAGTCCCGGCGCACTGTGGCCCTCATCAAGAGCGCAGCTGTGGCAGAGAGGGAGCGGGTGAGCCAGCTGTTTGCTGAGGCTGTGGCCAACCTGCAGAGCTTCCAGAAGGAGGTGCTGGGCTTCATTGAGGAGGGGGAGGCCACCATGCTGAGTCGCTCCCAGGGAGACCTGCGGCGACGAGAGGAACAGCGCAGCCGCCTAAGCAGGGCCCGCCACAACCTCAGTCAGGTCCCTGAAGCTGACTCAGTCAGCTTCCTGCAGGAGCTCCTGGCACTACGGCTGGCCCTGGAGGAGGGGAGCGGCCCTGGACCCAGCCCCCCAAAGGAGCTCAGCTTCACCAAGTCGTCGCAAGCTGTCCGGGCAGTGAGAGATGTGCTGGCCTCCGCCTGTGCCAGCCAGTGGGAGCAGCTTCGGGGGCAGGGCGGTGATGAGGACGGGCTGCAGAAGCTGGGCTCAGAAGCTGATGCCGAGTCCCAGGACCCTGATAGCACCAACCTCCTGGAGAGTGACGTACCCAGGGACTATTTCCTCAAGTTTGCCTACATCGTGGACTTGGACAGTGATACGGCAGACAAGTTCTTGCAACTGTATGGTACCAAAGGTGTCAAAAGGGTGCTGTGTCCCATCAACTACCCAGAGTCAGCCACACGCTTCACCCATTGTGAGCAGGTGCTGGGCGAAGGCGCCCTGGACCGAGGCACCTATTACTGGGAGGTAGAAATCATTGAGGGTTGGGTCAGCGTGGGAGTCATGGCGGAAGGCTTCTCCCCGCAAGAGCCCTATGACCGAGGCCGGCTGGGCCGCAACGCGCAGTCCTGCTGCCTGCAGTGGAATGGACGCAACTTCTCTGTCTGGTTCCATGGACTGGAGGTGGCCCTGCCCAACGACTTCTCGCCCACAGTTGGGATCTGCCTGGAGTACGCTGACCGTGCCCTGGCCTTCTATGCCGTGCGTGATGGCAAGATGAGCCTGCTGCGGAGGCTGAAGGCATCCAGGCCACGCCGGAGTGGCGCCTTGGCCTCCCCCACTGACCCCTTCCAGAGCCGCCTGGACAGCCACTTTTCAGGGCTCTTCACCCACAGGCTCAAGCCTGCCTTCTTCCTGGAGAGTGTGGATGCCCATCTGCAGATTGGGCCTCTCAAGAAGTCCTGCATAACTGTGCTGAAGAGGAGGTGA

Related Sequences

XP_004860775.1 Protein

Trim47 PREDICTED: tripartite motif-containing protein 47 [Heterocephalus glaber]

Length: 638 aa      View alignments
>XP_004860775.1
MDGSGPFSCPICLEPLREPVTLPCGHNFCLACLGALWPHRSAGGAGGSGGAARCPLCQEPFPDGLQLRKNHTLSELLQLRQGSGPGPMPNPPRGPTPEPSAPSAPPSAPEPSAPCAPQPWPSGEEPVHCDACPEGAALPAALSCLTCLASFCPAHLGPHERSPALRGHRLVPPLRRLEESLCPRHLRPLERYCRAERVCLCETCAAQDHRGHELVSLEQERALQEAEQPKVLSAVEDRIDELGASIAQSRRTVALIKSAAVAERERVSQLFAEAVANLQSFQKEVLGFIEEGEATMLSRSQGDLRRREEQRSRLSRARHNLSQVPEADSVSFLQELLALRLALEEGSGPGPSPPKELSFTKSSQAVRAVRDVLASACASQWEQLRGQGGDEDGLQKLGSEADAESQDPDSTNLLESDVPRDYFLKFAYIVDLDSDTADKFLQLYGTKGVKRVLCPINYPESATRFTHCEQVLGEGALDRGTYYWEVEIIEGWVSVGVMAEGFSPQEPYDRGRLGRNAQSCCLQWNGRNFSVWFHGLEVALPNDFSPTVGICLEYADRALAFYAVRDGKMSLLRRLKASRPRRSGALASPTDPFQSRLDSHFSGLFTHRLKPAFFLESVDAHLQIGPLKKSCITVLKRR