Details from NCBI annotation

Gene Symbol Clcn1
Gene Name chloride channel, voltage-sensitive 1
Entrez Gene ID 101709093

Database interlinks

Part of NW_004624800.1 (Scaffold)

For more information consult the page for NW_004624800.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLCN1 ENSCPOG00000014700 (Guinea pig)

Gene Details

chloride channel, voltage-sensitive 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013245, Guinea pig)

Protein Percentage 92.63%
CDS Percentage 91.78%
Ka/Ks Ratio 0.15218 (Ka = 0.0376, Ks = 0.2473)

CLCN1 ENSG00000188037 (Human)

Gene Details

chloride channel, voltage-sensitive 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000339867, Human)

Protein Percentage 89.07%
CDS Percentage 87.75%
Ka/Ks Ratio 0.1342 (Ka = 0.0564, Ks = 0.4203)

Clcn1 ENSMUSG00000029862 (Mouse)

Gene Details

chloride channel 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031894, Mouse)

Protein Percentage 88.54%
CDS Percentage 85.8%
Ka/Ks Ratio 0.13361 (Ka = 0.0667, Ks = 0.499)

Clcn1 ENSRNOG00000016917 (Rat)

Gene Details

chloride channel, voltage-sensitive 1 (Clcn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043372, Rat)

Protein Percentage 87.42%
CDS Percentage 85.4%
Ka/Ks Ratio 0.13967 (Ka = 0.0712, Ks = 0.5099)

Genome Location

Sequence Coding sequence

Length: 2976 bp    Location: 11446666..11418174   Strand: -
>XM_004860486.1
ATGGAGCAAGCCCAGGCCCAACGGCATGGGGTTGAACAGAGCTGGTGGGGAAGTGCCCCCCAGTACCAGTACATGCCCTTTGAGCACTGCACCAGCTACGGACTGCCCTCTGAGAATGGGGGCCTTCAGCACCGGCCCCAAAAGGATGCAGGCCCCTGGCACAACGCCCACCCCACACAGATTTATGGCCATCACAAAGAGCGATTTTCAGACAAGGAGCAGGATATAAGGATGCCCAAGAAGATGGGCTCCAGTTCTACCTTGGACAGCAAGGATGAGGACCACTATTCTAAATGTCAAGGTTGTATCCACCGGCTAGAATGCATGGTGAGAAGGAAGTTAGGGGAAGACTGGATCTTTCTGGTGCTCTTGGGCCTGCTGATGGCTCTGGTCAGCTGGTGCATGGACTATGTCAGTGCCAAAAGCCTTCAGGCCTACAAGTGGACCTACGCCCAGATGCAGCCCAACCTTCCTCTGCAATACCTGGTCTGGGTCACCTTCCCGCTAGTCCTCATCCTCTTCAGCGCCCTCTTCTGCCACCTCATCTCTCCCCAGGCTGTTGGCTCTGGAATCCCTGAAATGAAGACAATCCTTCGAGGCGTTGTCCTGAAAGAATATCTCACACTCAAGGCCTTTGTGGCGAAGGTGGTGGCCCTGACCGCAGGGCTGGGCAGTGGCATCCCTGTGGGGAAAGAGGGCCCTTTCGTCCACATTGCCAGCATCTGTGCCGCTATCCTCAGCAAGTTCATGGCCATGTTCTGTGGAGTCTATGAGCAGCCGTACTATTACACTGACATGCTGACAGTGGGCTGTGCCGTGGGAGTTGGCTGCTGCTTTGGAACACCTCTTGGAGGTGTGCTCTTCAGCATTGAGGTCACCTCTACCTACTTTGCCGTGCGGAACTACTGGCGAGGATTCTTTGCAGCCACGTTCAGTGCTTTTGTGTTCCGAGTGCTGGCGGTGTGGAACAAGGATGCTGTCACCATCACGGCTCTGTTCCGAACCAATTTCCGAATGGACTTCCCCTTTGACCTACAGGAACTCCCAGCCTTTGCTGTCATTGGAATTTGCTGTGGGTTCCTGGGAGCTGTATTTGTGTACCTGCATCGCCAAGTCATGCTCGGTGTCCGAAAGCACAAGGCCCTCAGCCAGTTTCTTGCTAAGCACCGCCTGCTGTATCCTGGAATTGTTACCTTTGTCATCGCCTCGTTCACCTTTCCGCCAGGAATGGGCCAGTTCATGGCTGGAGAGCTGATGCCCCGTGAAGCCATCAGCACCCTGTTTGACAACAATACATGGGTAAAGCACGAGGGCGACCCCCAAATCCTGGGCCAGTCGGCTGTATGGATCCACCCCCGAGTCAACGTTGTCATCATCATCCTTCTCTTCTTCATCATGAAGTTTTGGATGTCTATCGTAGCTACCACTATGCCCATTCCCTGTGGAGGCTTCATGCCTGTGTTTGTATTAGGAGCTGCATTTGGAAGGTTGGTGGGAGAAATCATGGCCATGCTATTCCCGGAGGGTATCTTATTTGATGACATTATCTACAAAATTCTGCCTGGGGGCTACGCAGTAATTGGAGCAGCGGCCCTGACAGGTGCCGTGTCCCACACAGTCTCCACAGCTGTGATTTGCTTCGAATTAACGGGTCAGATTGCTCACATCCTACCCATGATGGTGGCTGTTATCTTGGCCAACATGGTGGCTCAGAGCCTGCAGCCTTCCCTCTATGACAGCATCATCCAGGTCAAGAAGCTGCCCTACTTGCCTGACCTCGGTTGGAAGCAGCTCAGCAAATTTACAATCTTTGTTGAGGACATCATGGTACGCGATGTGAAGTTTGTTTCAGCTTCATGCACATATGGGGAACTGCAAAACCTGCTCCAGGCCACCACAGTCAAGACTTTACCACTGGTTGATTCAAAAGATTCCAGGATCCTGCTGGGGTCCGTGGAGCGCTCCGAGTTGCAGTCCCTCCTGCAGCGCCACCTGTGTCCGGAGCGGAGGTTGCGGGCAGCCCGGGACCTGGCGCTGAAGTTGTCCGAGCTGCCCTACGATGGCAAGGCACGGCTAGCGGGGGACGGGCTCCTGGGCGGCGCGCCAAGGGGTCGGCCAGAGTCCTTCGCCTTTGTGGATGAGGATGAAGATGAGGACCTGTCCAGCAAGACCGAGCTGCCGCCTCCTCCTCCTCCTCTTCCACCCTTTCCTAGTGTTACCCCATCTTTTGAGGAGCCCAATGGACCCCTGCCTGGCCACAAACAGTCACCCGAAGCCCCAGAACCTGCAGGTCAAAGATCCTCTATCTTTCAGTGCCTGCTACACTGCTTGCTGGGCCGAGCTCGACCAGCAAAGAAGAAAACAACCCAGGATTCGACGGACTTAGTGGATAACATGTTACCTGAAGAGATCGAGGCCTGGGAGCAGGAGCAGCTGAGCCAGCCTGTCTGTTTTGATTGCTGCTGCATCGACCCATCTCCCTTCCAGCTAGTGGAGCAGACCACCCTGCACAAGACACACACGCTCTTCTCGCTCCTTGGCCTCCATCTCGCCTATGTGACCAACATGGGGAAACTCAGGGGCGTCCTGGCGCTGGAGGAGCTACAGAAAGCTATCGAGGGTCACACCCAATCTGGGGTGCAGCTCCGCCCTCCCCTTGCCAGCTTCCGGAACACAAATACCTCTCTGAAGAGCCCGGGTGGCCCACCCCCTCCTGAAGATGGCTGGAGCCTGCCTGAGGATACTGCAGGCCCCCCTGGAACAGGGGACCTGACTCCTGCCTCCCCAGAGACACCAGTGCCACCCCCATCCCTACATCCCCCTCAGCCCCTGGCCCCAGCCAAGGCAGGGTGTGAAACGGAGGAGCTGGAGTTAGTGGAGAGCCCAGAGCCGGAAGAGGAGCTGGCTGACATCCTGCAGGGTCCCAGTTTGCGATCCACTGATGAAGAGGAGGATGAGGATGAACTGATTCTTTGA

Related Sequences

XP_004860543.1 Protein

Clcn1 PREDICTED: chloride channel protein 1 [Heterocephalus glaber]

Length: 991 aa      View alignments
>XP_004860543.1
MEQAQAQRHGVEQSWWGSAPQYQYMPFEHCTSYGLPSENGGLQHRPQKDAGPWHNAHPTQIYGHHKERFSDKEQDIRMPKKMGSSSTLDSKDEDHYSKCQGCIHRLECMVRRKLGEDWIFLVLLGLLMALVSWCMDYVSAKSLQAYKWTYAQMQPNLPLQYLVWVTFPLVLILFSALFCHLISPQAVGSGIPEMKTILRGVVLKEYLTLKAFVAKVVALTAGLGSGIPVGKEGPFVHIASICAAILSKFMAMFCGVYEQPYYYTDMLTVGCAVGVGCCFGTPLGGVLFSIEVTSTYFAVRNYWRGFFAATFSAFVFRVLAVWNKDAVTITALFRTNFRMDFPFDLQELPAFAVIGICCGFLGAVFVYLHRQVMLGVRKHKALSQFLAKHRLLYPGIVTFVIASFTFPPGMGQFMAGELMPREAISTLFDNNTWVKHEGDPQILGQSAVWIHPRVNVVIIILLFFIMKFWMSIVATTMPIPCGGFMPVFVLGAAFGRLVGEIMAMLFPEGILFDDIIYKILPGGYAVIGAAALTGAVSHTVSTAVICFELTGQIAHILPMMVAVILANMVAQSLQPSLYDSIIQVKKLPYLPDLGWKQLSKFTIFVEDIMVRDVKFVSASCTYGELQNLLQATTVKTLPLVDSKDSRILLGSVERSELQSLLQRHLCPERRLRAARDLALKLSELPYDGKARLAGDGLLGGAPRGRPESFAFVDEDEDEDLSSKTELPPPPPPLPPFPSVTPSFEEPNGPLPGHKQSPEAPEPAGQRSSIFQCLLHCLLGRARPAKKKTTQDSTDLVDNMLPEEIEAWEQEQLSQPVCFDCCCIDPSPFQLVEQTTLHKTHTLFSLLGLHLAYVTNMGKLRGVLALEELQKAIEGHTQSGVQLRPPLASFRNTNTSLKSPGGPPPPEDGWSLPEDTAGPPGTGDLTPASPETPVPPPSLHPPQPLAPAKAGCETEELELVESPEPEEELADILQGPSLRSTDEEEDEDELIL