Sequence details NCBI ID: XM_004860483.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fam115a
Gene Name family with sequence similarity 115, member A, transcript variant X3
Entrez Gene ID 101707533

Database interlinks

Part of NW_004624800.1 (Scaffold)

For more information consult the page for NW_004624800.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FAM115A ENSCPOG00000004765 (Guinea pig)

Gene Details

family with sequence similarity 115, member A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004291, Guinea pig)

Protein Percentage 96.85%
CDS Percentage 92.69%
Ka/Ks Ratio 0.06379 (Ka = 0.0175, Ks = 0.2748)

FAM115A ENSG00000198420 (Human)

Gene Details

family with sequence similarity 115, member A

External Links

Gene Match (Ensembl Protein ID: ENSP00000419235, Human)

Protein Percentage 95.77%
CDS Percentage 90.99%
Ka/Ks Ratio 0.05569 (Ka = 0.0205, Ks = 0.3687)

Fam115a ENSMUSG00000036667 (Mouse)

Gene Details

family with sequence similarity 115, member A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036379, Mouse)

Protein Percentage 90.42%
CDS Percentage 85.13%
Ka/Ks Ratio 0.08373 (Ka = 0.0522, Ks = 0.6238)

Fam115a ENSRNOG00000017911 (Rat)

Gene Details

Protein Fam115a; Similar to mKIAA0738 protein (Predicted), isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024428, Rat)

Protein Percentage 90.66%
CDS Percentage 85.6%
Ka/Ks Ratio 0.07978 (Ka = 0.0484, Ks = 0.6064)

Genome Location

Sequence Coding sequence

Length: 2766 bp    Location: 11084276..11116419   Strand: +
Raw sequence   
>XM_004860483.1
ATGGCGACTCCCTCTGCTGCCTTCGAGGCTCTTATGAATGGAGTGACAAGCTGGGATCTCCCTGAAGATGCCATCCCATGTGAATTGCTTCTTATCGGGGAGGCCTCATTTCCTGTGATGGTGAATGACATGGGCCAGGTCCTCATTGCTGCCTCCTCCTATGGTAGAGGCCGCCTGGTGGTCTTATCCCATGAAGACTACTTGGTGGAAACTCAGCTGTCTCCCTTTCTTGTCAATGCTGTGGGGTGGCTTTGTTCTTCCCCTGGGGCTCCCATTGGTGTACACCCATCCCTGGCACCTTTGGTCAAAGTCTTCGAGGGTGTTGGAATAGAGGCAAAGATTGAGCCAGAAGTGAACGACTCCTTGGGGGTTTACTGTATTGATGCCTACAATGAAAATATGACTGAAAAGCTGGTCCAGTTTATGAAGCGTGGAGGAGGTTTACTCATGGGAGGCCAGGCCTGGGATTGGGCCAACCAAGGTGATGATGAAAGAGTTCTGTTCACATTCCCTGGGAACCTGGTGACCAGTGTGGCAGGTGTGTACTTCACTGACAACAAAGGAGACACCAGTTTCTATAAAGTCTCTAAGAAGATGCCCAAGATCCCAGTCTTAGTTAGTTGTGAAGATGACCTGTCTGAGGACAGAGATGAGCTCCTGCATGGGATTTCGGAGCTGGACATCAGCAACTCGGATTGTTTTCCATCCCAGCTGCTAGTGCATGGGGCCTTAGCCTTTCCTCTGGGCTTGGATTCCTACCATGGCTGTGTTATAGCGGCTGCCCGCTATGGCCGGGGCCGAGTGGTTGTGACTGGCCATAAAGTATTATTCACCGTGGGGAAACTAGGCCCTTTTCTTCTCAATGCTGTCCGCTGGCTGGATGGGGGCCGAAGAGGCAAGATCGTGGTACAGACCGAGCTTCGAACACTGAGTGGCCTGCTTGCCGTGGGGGGCATAGACACCAGCATCGAGCCCCATCTGACCAGCGATGCGAGTGTCTATTGCTTTGAACCCGTGAGTGACGTGGGGGTCAAAGAGCTGCAGGAGTTTGTAGCAGAGGGCGGTGGGTTATTCATTGGAGCCCAAGCTTGGTGGTGGGCCTTCAAGAACCCCGGAGTGTCCCCTCTGGCTCGATTTCCAGGAAACCTCCTTCTCAACCCCTTTGGCATCAGTATCACAAGCCAAAGCCTCAATCCCGGGCCCTTTCGTACCCCTAAAGCAGGGATAAGGACCTATCACTTCCGCTCCACTCTAGCCGAGTTCCAGGTTATCATGGGCCGCAAGAGAGGTAACGTGGAGAAGGGCTGGCTGGCAAAGCTGGGACCAGATGGCGCAGCGTTCCTGCAGATCCCCGCCGAGGACATCCCAGCCTACATGTCCGTGCATCGGCTTCTACGGAAGCTGCTGAGCCGCTATCGTCTCCCAGTCGCCACCCGAGAGAACCCTGTTATCAATGACTGCTGCAGGGGGGCTATGCTTTCCCTGGCCACGGGCCTGGCCCACTCTGGAAGTGACCTCTCTCTGTTAGTCCCAGAAATCGAAGACATGTACAGCAGCCCCTACCTGCGCCCCTTGGAGTCTCCCATCACCGTTGAGGTCAACTGCACCAATCCAGGCACCCGATACTGCTGGATGAGCACTGGCCTCTACATCCCGGGAAGGCAAATCATAGAAGTCTCACTGCCCGAAGCTGCTGCCTCTGCTGATCTGAAGATACAGATTGGTTGCCACACGGATGACCTGACCAGGGCCAGCAAGCTGTTCCGAGGGCCCCTCGTGATTAACCGGTGCTGCTTGGACAAACCCACGAAGTCAATCACCTGCCTCTGGGGTGGACTCCTCTATATCATCGTGCCCCAGAACAGCAAGCTGGGTTCTGTGCCCATCACCGTGAAGGGGGCTGTGCATGCTCCCTACTACAAGCTGGGGGAAACATCCCAGGAGGAGTGGAAGAGACAAATCCAGGAGAATCCAGGTCCCTGGGGAGAGCTGGCCACCAACAACATCATCCTCACAGTGCCAACTGCAAACCTGCGTGCTCTGGAGAACCCTGAGCCGCTGCTCCTCCTCTGGGATGAAGTGATGCAGGCTGTGGCACGACTGGGTGCCGAGCCTTTCCCTTTGCGTCTGCCCCAAAGGATTGTGGCCGATGTACAGATCTCAGTGGGCTGGATGCATGCAGGGTACCCCATCATGTGTCACCTGGAGTCTGTGCAGGAGCTCATCAACGAGAAGCTCATCAGAACCAAGGGGCTGTGGGGCCCTGTGCATGAGCTGGGCCGCAACCAGCAGCGGCAGGAGTGGGAATTCCCACCACACACCACTGAGGCCACCTGCAACTTGTGGTGTGTATATGTGCATGAGACAGTCTTGGGCATTCCTCGAGGCCGTGCCAATATTGCCCTGTGGCCCCCAGTTCGGGAGAAGAGAGTCCGAATCTACCTGAGCAAGGGGCCTAATGTGAAGAACTGGAATGCCTGGACCGCACTGGAAACGTATTTGCAGCTCCAGGAGGCCTTTGGTTGGGAGCCATTCATCCATCTCTTCACTGAGTATAGGAACCAGACCAACTTGCCCACAGATAATGTCGACAAAATGAATCTGTGGGTCAAGATGTTCTCCCACCAAGTGCAGAAGAATCTGGCTCCATTCTTTGAGGCCTGGGCCTGGCCCATCCAGAAGGAAGTGGCTACCAGCCTGGCCTACCTGCCTGAATGGAAGGAAAATATTATGAAATTGTACCTTCTCACACAGATGCCCCACTGA

Related Sequences

XP_004860540.1 Protein

Fam115a PREDICTED: protein FAM115A isoform X3 [Heterocephalus glaber]

Length: 921 aa      View alignments
>XP_004860540.1
MATPSAAFEALMNGVTSWDLPEDAIPCELLLIGEASFPVMVNDMGQVLIAASSYGRGRLVVLSHEDYLVETQLSPFLVNAVGWLCSSPGAPIGVHPSLAPLVKVFEGVGIEAKIEPEVNDSLGVYCIDAYNENMTEKLVQFMKRGGGLLMGGQAWDWANQGDDERVLFTFPGNLVTSVAGVYFTDNKGDTSFYKVSKKMPKIPVLVSCEDDLSEDRDELLHGISELDISNSDCFPSQLLVHGALAFPLGLDSYHGCVIAAARYGRGRVVVTGHKVLFTVGKLGPFLLNAVRWLDGGRRGKIVVQTELRTLSGLLAVGGIDTSIEPHLTSDASVYCFEPVSDVGVKELQEFVAEGGGLFIGAQAWWWAFKNPGVSPLARFPGNLLLNPFGISITSQSLNPGPFRTPKAGIRTYHFRSTLAEFQVIMGRKRGNVEKGWLAKLGPDGAAFLQIPAEDIPAYMSVHRLLRKLLSRYRLPVATRENPVINDCCRGAMLSLATGLAHSGSDLSLLVPEIEDMYSSPYLRPLESPITVEVNCTNPGTRYCWMSTGLYIPGRQIIEVSLPEAAASADLKIQIGCHTDDLTRASKLFRGPLVINRCCLDKPTKSITCLWGGLLYIIVPQNSKLGSVPITVKGAVHAPYYKLGETSQEEWKRQIQENPGPWGELATNNIILTVPTANLRALENPEPLLLLWDEVMQAVARLGAEPFPLRLPQRIVADVQISVGWMHAGYPIMCHLESVQELINEKLIRTKGLWGPVHELGRNQQRQEWEFPPHTTEATCNLWCVYVHETVLGIPRGRANIALWPPVREKRVRIYLSKGPNVKNWNAWTALETYLQLQEAFGWEPFIHLFTEYRNQTNLPTDNVDKMNLWVKMFSHQVQKNLAPFFEAWAWPIQKEVATSLAYLPEWKENIMKLYLLTQMPH