Sequence details NCBI ID: XM_004860407.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmem176b
Gene Name transmembrane protein 176B, transcript variant X6
Entrez Gene ID 101713185

Database interlinks

Part of NW_004624800.1 (Scaffold)

For more information consult the page for NW_004624800.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM176B ENSCPOG00000024257 (Guinea pig)

Gene Details

transmembrane protein 176B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014838, Guinea pig)

Protein Percentage 68.05%
CDS Percentage 75.06%
Ka/Ks Ratio 0.40855 (Ka = 0.2364, Ks = 0.5786)

TMEM176B ENSG00000106565 (Human)

Gene Details

transmembrane protein 176B

External Links

Gene Match (Ensembl Protein ID: ENSP00000410269, Human)

Protein Percentage 60.07%
CDS Percentage 75.0%
Ka/Ks Ratio 0.77671 (Ka = 0.2984, Ks = 0.3842)

Tmem176b ENSMUSG00000029810 (Mouse)

Gene Details

transmembrane protein 176B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128705, Mouse)

Protein Percentage 58.02%
CDS Percentage 68.96%
Ka/Ks Ratio 0.48764 (Ka = 0.347, Ks = 0.7115)

Tmem176b ENSRNOG00000008465 (Rat)

Gene Details

transmembrane protein 176B (Tmem176b), transcript variant 4, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011327, Rat)

Protein Percentage 54.41%
CDS Percentage 68.07%
Ka/Ks Ratio 0.54317 (Ka = 0.3772, Ks = 0.6945)

Genome Location

Sequence Coding sequence

Length: 813 bp    Location: 5756271..5842443   Strand: +
Raw sequence   
>XM_004860407.1
ATGACCCAAAACATGGTGACTGTGAACGGAGTCAGTGTGGCCTCTCTGCCGCCCCAGCCCACGCACATCAACATCCACATCCACCGGGAGTCAGCTCTGACACAGCTGCTGAAGGCAGTGGGATCCCTGAAGCAGTTGCTTTCTCACCCTCGGGACTCTGGGCCTTCCAAGGCCAGGACAAGCAATGAGCAGCTGGCTCTAGGGGTGAAGCAGATACTGCTGGGGGTTGTAAGCTGTGCTCTTGGAGTGAGTCTCTACTTTGGGCCCAGGACTGAGCTGCGAGTCTTGGGCTGTGCCTTCTGGGCAGGGTCTGTGGCAATTGCAGCAGGAGCTGGGGCCATTGTCCATGAGAAACACAGGGGCAAACTTTCAGGCTGTGTGTCAGGGCTGCTCACCCTGGCTGGCATTGCTGCCACTGTGGCTGCCATTGTTTTCTGTGTGAGGACCTTAATCTGGCAAACAGATGACTTAAACTATAAGAAGTTCAACTCCGTGTGTGATAGGCTAGTCCCTGTCACCACAACCACTAATTACAGATGGAGGAATAACAACTCAGACTGGAGGACAGAGAATTGTAGAACATTGATGAAAATGACCCTGCACCTCTTCCTGGGATTCTGTATCCTGCTCACAGTTGTCTGTATTCTGAATGTCATCGTGTCTTTGGCTTCCCTGGGACTGCATCTTCGAAGCATGCGTGGCCGAAGCTCTGAGTTCCTAGATGAGAAAGAGTCAAACCAGAAGCTTCTGAGGGTGAATCCAGTGACCCCTTCCACCTCCAAGGAGGAGACCCTGACTGTCATCAACCTGTGA

Related Sequences

XP_004860464.1 Protein

Tmem176b PREDICTED: transmembrane protein 176B isoform X6 [Heterocephalus glaber]

Length: 270 aa      View alignments
>XP_004860464.1
MTQNMVTVNGVSVASLPPQPTHINIHIHRESALTQLLKAVGSLKQLLSHPRDSGPSKARTSNEQLALGVKQILLGVVSCALGVSLYFGPRTELRVLGCAFWAGSVAIAAGAGAIVHEKHRGKLSGCVSGLLTLAGIAATVAAIVFCVRTLIWQTDDLNYKKFNSVCDRLVPVTTTTNYRWRNNNSDWRTENCRTLMKMTLHLFLGFCILLTVVCILNVIVSLASLGLHLRSMRGRSSEFLDEKESNQKLLRVNPVTPSTSKEETLTVINL