Sequence details NCBI ID: XM_004860380.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Agap3
Gene Name ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, transcript variant X2
Entrez Gene ID 101706435

Database interlinks

Part of NW_004624800.1 (Scaffold)

For more information consult the page for NW_004624800.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AGAP3 ENSCPOG00000004084 (Guinea pig)

Gene Details

ArfGAP with GTPase domain, ankyrin repeat and PH domain 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003685, Guinea pig)

Protein Percentage 96.58%
CDS Percentage 91.55%
Ka/Ks Ratio 0.04258 (Ka = 0.0194, Ks = 0.4567)

AGAP3 ENSG00000133612 (Human)

Gene Details

ArfGAP with GTPase domain, ankyrin repeat and PH domain 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000380413, Human)

Protein Percentage 97.0%
CDS Percentage 90.05%
Ka/Ks Ratio 0.01903 (Ka = 0.0138, Ks = 0.726)

Agap3 ENSMUSG00000023353 (Mouse)

Gene Details

ArfGAP with GTPase domain, ankyrin repeat and PH domain 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024123, Mouse)

Protein Percentage 96.19%
CDS Percentage 88.08%
Ka/Ks Ratio 0.02403 (Ka = 0.0194, Ks = 0.8074)

Agap3 ENSRNOG00000012764 (Rat)

Gene Details

ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 (Agap3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063846, Rat)

Protein Percentage 91.49%
CDS Percentage 85.89%
Ka/Ks Ratio 0.05165 (Ka = 0.0432, Ks = 0.8371)

Genome Location

Sequence Coding sequence

Length: 2607 bp    Location: 5535396..5486728   Strand: -
Raw sequence   
>XM_004860380.1
ATGAACTTCCAGGCTGGCGGGGGACAGAGCCCGCAGCAGCAGCAGAGCCTGCAGCTGGCCGGCGGGCCGCCCCAGCAGTTCGCGCTCTCCAACTCGGCGGCCATCCGCGCGGAGATCCAGCGTTTTGAGTCGGTGCATCCCAACATCTACGCCATCTACGATTTGATCGAGCGCATCGAGGATTTGGCGCTGCAGAACCAGATCCGGGAGCACGTCATCTCCATCGAGGACTCATTTGTGAACAGCCAGGAGTGGACGCTAAGCCGCTCAGTGCCAGAGCTTAAAGTGGGCATAGTGGGAAACTTGTCCAGTGGAAAGTCGGCTCTGGTGCACCGCTATCTCACAGGAACCTATGTCCAAGAGGAATCCCCAGAAGGCGGTCGGTTTAAGAAGGAGATCGTGGTGGATGGTCAGAGTTACCTGCTGCTGATCCGAGATGAAGGTGGCCCTCCGGAGCTCCAGTTTGCAGCCTGGGTAGACGCCGTGGTATTTGTGTTCAGCCTGGAGGATGAGATCAGCTTCCAGACAGTGTACAACTACTTCCTGCGGCTCTGCAGCTTCCGAAATGCCAGCGAGGTGCCCATGGTGCTGGTGGGCACACAGGACGCCATAAGTGCTGCCAACCCCCGGGTCATTGACGATGGCCGGGCCCGCAAACTCTCCACGGACCTGAAACGCTGCACCTATTATGAGACGTGTGCAACCTACGGGCTCAACGTGGAGCGCGTCTTCCAGGACGTGGCCCAGAAAGTGGTGGCCTTGCGGAAGAAGCAGCAGCTTGCTATCGGGCCCTGCAAATCTCTGCCCAACTCGCCCAGCCACTCGGCTGTGTCCGCCGCCTCCATCCCGGCCGTGCACATCAACCAGGCCACAAATGGCGGCAGCAGCGCCTTCAGCGACTACTCGTCCTCAGTCCCCTCTACCCCCAGCATCAGCCAGCGGGAACTGCGCATCGAGACCATCGCTGCCTCCTCCACCCCCACGCCCATCCGCAAGCAGTCCAAGCGGCGCTCCAACATCTTCACGTCTCGAAAGGGGGCTGACCTGGACCGGGACAAGAAGGCTGCCGAGTGCAAGGTGGACAGCATCGGGAGCGGCCGGGCCATCCCCATTAAGCAGGGGATCTTGCTGAAGCGGAGCGGCAAGTCTCTGAACAAGGAGTGGAAAAAGAAGTACGTGACGCTGTGTGACAACGGGCTGCTCACCTACCACCCCAGCCTGCATGATTACATGCAGAACATCCATGGCAAGGAGATCGATCTGCTGCGGACGACAGTGAAGGTACCAGGGAAGCGTCTACCCCGAGCCACACCGGCCACAGCCCCAGGCACCAGCCCAAGAGCCAACGGGCTGCCCTTGGAGCGGAGCAACACGCAACTGGGTGGGGGCCCAGGTGCCCCCCACTCGGCCAGCAGCGCTTCCCTGCACTCCGAGCGCACCCTCAGCAGCTCGGCCTGGGCAGGCCCACGCCCTGAGGGGCTGCACCAGCGCTCTTGCTCCGTCTCCAGCGCCGACCAGTGGAGCATGCAGCACCCCGCGGGTGGCACGGCTGACGTGCTCAGTTCCAGCCCCAAGCTGGAACCTCCCCCATCTCCCCACTCCAACCGGAAGAAGCACCGTTGGAAAAAGAGCGCCGGGAACCCCCGACCAGACGGCCCCAGCAGTGCTGCCGAAGAGGCAGAGGAGTCCTTCGAGTTCGTGGTGGTGTCCCTCACCGGGCAGACGTGGCACTTCGAGGCCTCGACGGCGGAGGAGCGGGAACTGTGGGTGCAGAGCGTGCAGGCCCAGATCCTCGCCAGCCTGCAGGGCTGCCGTAGCGCCAAAGACAAGGCCCGCTTGGGGAATCAGAATGCAGCTCTGGCCGTGCAGGCTGTCCGAACCGTGCGCGGCAACAGCTTCTGTATCGACTGTGATGCCCCCAATCCCGATTGGGCCAGCCTGAACCTGGGTGCCCTAATGTGTATCGAGTGCTCGGGGATCCACCGCCACCTGGGGGCTCACCTGTCCCGGGTCCGCTCCCTGGACCTGGACGACTGGCCACCCGAGCTGCTGGGCGTGATGACAGCCATGGGCAATGCCCTGGCCAACAGTGTCTGGGAAGGGGCTGTGGATGGCTATGCAAAGCCGGGGCCTGAAGCCTGCAGAGAGGAGAAGGAGCGCTGGATCCGGGCCAAGTACGAGCAGAAGCTCTTCCTGGCCCCACTGCCCAGCTCGGATGTGCCGCTGGGGCAGCAGCTGCTCCGGGCCGTGGTGGAGGACGACCTGCGGCTGCTGGTGATGCTGCTGGCCCACGGGTCCAAGGAGGAGGTGAACGAGACCTACGGCGACGGCGATGGGCGGACGGCCCTGCACCTGTCCAGCGCCATGGCCAATGTGGTCTTCACACAGCTGCTCATCTGGTACGGCGTGGATGTGAGGAGCCGGGATGCGCGGGGCCTGACTCCGCTGGCCTACGCCCGCCGCGCTGGCAGCCAGGAGTGCGCGGACATCTTGATCCAGCACGGCTGCCCTGGGGAGGGCTGCGGCCTGGCACCCACACCCAGCAGAGAGCCCGCCAACGGCCCCAGTACCTCTGCCGAGCTGCACCGCAGCCCCAGCCTCCTATGA

Related Sequences

XP_004860437.1 Protein

Agap3 PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X2 [Heterocephalus glaber]

Length: 868 aa      View alignments
>XP_004860437.1
MNFQAGGGQSPQQQQSLQLAGGPPQQFALSNSAAIRAEIQRFESVHPNIYAIYDLIERIEDLALQNQIREHVISIEDSFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDGRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRKKQQLAIGPCKSLPNSPSHSAVSAASIPAVHINQATNGGSSAFSDYSSSVPSTPSISQRELRIETIAASSTPTPIRKQSKRRSNIFTSRKGADLDRDKKAAECKVDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNIHGKEIDLLRTTVKVPGKRLPRATPATAPGTSPRANGLPLERSNTQLGGGPGAPHSASSASLHSERTLSSSAWAGPRPEGLHQRSCSVSSADQWSMQHPAGGTADVLSSSPKLEPPPSPHSNRKKHRWKKSAGNPRPDGPSSAAEEAEESFEFVVVSLTGQTWHFEASTAEERELWVQSVQAQILASLQGCRSAKDKARLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLGVMTAMGNALANSVWEGAVDGYAKPGPEACREEKERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGDGRTALHLSSAMANVVFTQLLIWYGVDVRSRDARGLTPLAYARRAGSQECADILIQHGCPGEGCGLAPTPSREPANGPSTSAELHRSPSLL