Details from NCBI annotation

Gene Symbol Smarcd3
Gene Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, transcript variant X2
Entrez Gene ID 101704283

Database interlinks

Part of NW_004624800.1 (Scaffold)

For more information consult the page for NW_004624800.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMARCD3 ENSCPOG00000020971 (Guinea pig)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015457, Guinea pig)

Protein Percentage 95.82%
CDS Percentage 92.81%
Ka/Ks Ratio 0.07949 (Ka = 0.0254, Ks = 0.3195)

SMARCD3 ENSG00000082014 (Human)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000262188, Human)

Protein Percentage 99.38%
CDS Percentage 94.34%
Ka/Ks Ratio 0.00857 (Ka = 0.0027, Ks = 0.3173)

Smarcd3 ENSMUSG00000028949 (Mouse)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030791, Mouse)

Protein Percentage 99.17%
CDS Percentage 93.1%
Ka/Ks Ratio 0.00901 (Ka = 0.0036, Ks = 0.4019)

Smarcd3 ENSRNOG00000010077 (Rat)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (Smarcd3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061137, Rat)

Protein Percentage 96.6%
CDS Percentage 91.63%
Ka/Ks Ratio 0.03932 (Ka = 0.0177, Ks = 0.4512)

Genome Location

Sequence Coding sequence

Length: 1452 bp    Location: 5397249..5406472   Strand: +
>XM_004860373.1
ATGGCCGCGGACGAAGTTGCCGGAGGGGCGCGCAAAGCCACGAAAAGCAAACTTTTTGAGTTTCTGGTCCATGGGGTGCGCCCCGGGATGCCGTCCGGAGCCCGGATGCCCCACCAGGGGGCGCCCATGGGCCCCCCGGGCTCCCCGTACATGGGCAGCCCCGCCGTGCGACCCGGCCTGGCCCCCGCGGGCATGGAGCCCGCCCGCAAGCGAGCAGCGCCCCCGCCCGGGCAGAACCCCGCGCAGAGCCAGGGCCAGCCGGTGCCCACCGCCTCCGCGCGGAGCCGCAGTGCCAAGAGGAGGAAGATGGCTGACAAAATCCTCCCTCAAAGGATTCGGGAGCTGGTTCCCGAGTCCCAGGCTTACATGGACCTCTTAGCATTTGAAAGGAAACTGGATCAAACCATCATGCGGAAGCGGGTGGACATCCAGGAGGCCCTGAAGAGGCCCATGAAGCAAAAGCGGAAGCTGCGTCTTTATATCTCCAATACTTTTAACCCCGCGAAGCCCGATGCAGAGGACTCTGATGGCAGCATTGCCTCCTGGGAACTGCGGGTGGAGGGGAAGCTCCTGGATGATCCCAGCAAGCAGAAGCGGAAGTTCTCTTCCTTCTTCAAGAGTTTAGTCATTGAGCTGGACAAAGACCTGTACGGCCCTGACAACCACCTTGTTGAGTGGCACCGAACACCTACAACCCAGGAGACGGATGGGTTCCAGGTGAAGAGGCCAGGGGACCTCAGTGTGCGCTGCACACTACTCCTCATGCTGGACTACCAGCCTCCCCAGTTCAAACTGGACCCTCGCCTGGCCCGGCTGCTGGGGTTGCATACACAGAGCCGCTCGGCTATTGTACAGGCCCTGTGGCAGTACGTGAAGACTAACAGGCTACAGGACTCCCATGACAAAGAGTACATCAACGGGGACAAGTATTTCCAGCAGATTTTTGACTGTCCCCGGCTGAAGTTTTCTGAGATTCCCCAGCGCCTCACAGCCCTTCTGTTGCCCCCTGACCCAATTGTCATCAACCATGTCATCAGCGTGGACCCATCAGACCAGAAGAAGACAGCATGCTACGACATTGATGTGGAGGTGGAGGAGCCACTGAAGGGCCAGATGAGCAGCTTCCTCCTGTCCACAGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCATGAGACGATCGAGTCCATAAACCAGCTCAAGATCCAGAGGGACTTCATGCTAAGCTTCTCCAGAGACCCCAAAGGCTACGTCCAAGACCTGCTCCGCTCCCAGAGCCGGGACCTCAAGGTGATGACGGACGTAGCTGGCAACCCTGAAGAGGAGCGCAGGGCTGAATTCTACCACCAGCCTTGGTCCCAGGAGGCTGTGAGCCGCTACTTCTACTGCAAGATTCAACAGCGCAGGCAGGAGCTGGAGCAGTCACTGGTTGTGCGCAACACCTAG

Related Sequences

XP_004860430.1 Protein

Smarcd3 PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2 [Heterocephalus glaber]

Length: 483 aa      View alignments
>XP_004860430.1
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPPPGQNPAQSQGQPVPTASARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVRNT