Sequence details NCBI ID: XM_004860329.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nom1
Gene Name nucleolar protein with MIF4G domain 1, transcript variant X3
Entrez Gene ID 101718172

Database interlinks

Part of NW_004624800.1 (Scaffold)

For more information consult the page for NW_004624800.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NOM1 ENSCPOG00000025538 (Guinea pig)

Gene Details

nucleolar protein with MIF4G domain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016238, Guinea pig)

Protein Percentage 84.14%
CDS Percentage 86.41%
Ka/Ks Ratio 0.19382 (Ka = 0.0868, Ks = 0.4479)

NOM1 ENSG00000146909 (Human)

Gene Details

nucleolar protein with MIF4G domain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000275820, Human)

Protein Percentage 74.4%
CDS Percentage 74.0%
Ka/Ks Ratio 0.13537 (Ka = 0.1774, Ks = 1.3106)

Nom1 ENSMUSG00000001569 (Mouse)

Gene Details

nucleolar protein with MIF4G domain 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001611, Mouse)

Protein Percentage 72.76%
CDS Percentage 75.46%
Ka/Ks Ratio 0.16659 (Ka = 0.174, Ks = 1.0445)

Nom1 ENSRNOG00000048969 (Rat)

Gene Details

nucleolar protein with MIF4G domain 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065047, Rat)

Protein Percentage 67.17%
CDS Percentage 70.41%
Ka/Ks Ratio 0.18681 (Ka = 0.2408, Ks = 1.2888)

Genome Location

Sequence Coding sequence

Length: 2553 bp    Location: 1461698..1441929   Strand: -
Raw sequence   
>XM_004860329.1
ATGGTGGCGTCCTTGAAGTTGGTACGGCGTGGCCGCAGGCGTGGAACCCGCCTGAAACGCGGCAGTGACGGCCTCGGCGGGGAGGGAGCTCTGAAACGGCTCAAGCTGGCCGTGGAGGGGTTCGTGCGGGCCACCTCCGAGGCCGAGGCTCCCGGGGGCTTTGAGGGGCGCGGCGCCGCAGTGAGCTCCAGGCCGATAGGGAGGAAGAGCCGAAAGGAGCTGCGAAGGGAGAAGCGGCAGCTGCGGAAGGCGCGCCGCCTGCAGCGGGCGGGGGGACCGGGGCCAGCTAGAGAGGAAGGGAGCGCCCGCCCGCCCAGCAGGGCCCGAGAGGCCGAGGCCGCCCCGTCCCATTGCAAAGCCAAAGTCAAGACTTCCCCGGCTAAGCCTAAGGCTCCCCCGGCCTCAGCGCCCTCGGCCCACAGTAAGGCCAAGGCTACCCGGACTAAAGGTCCCTCTCTCAAGGCCGAGGCTCGCCCAAGGAAGACCGAACCCTCGGCCACCGCCCGGAAGCGGGCTCTGCTAGCGGCCAACGAGGAGGAGGACCGCGAGATCCGGAAGCTGGAGCGCTGCCTCGGCCTGAACAAGCGCAGGAAGAAGGGCGACGGCAGCTCCGTGCCGCTGAGCTTCGCGCGCGACGGGCTGGACTACATCTTGGGGGCCCTGGAACCCGGAGCAGGCGGCAGCGGCCTGTACGAGAGCAGCGGGGAGGAGGACGAAGAGGAAGAGGAGAGTGGCGAAGACGAAATACCCCCGGATAGCGACAGCAACCTCGACGTTGACTCCGAGCGCGAAAGCGAGGAGGACTTGGAGGGGGAAGCCCACCCCTCAGAGGATGAGGTCGAAAATGTGGAGGACGCAGACGACAGTGTAGACCCAGAACCCGGGGGAGGAGTAGAAGGCGGAGCGCGGGAGACGAGGGGGAGGAAGAGAGTCCGTTTTGCAAAAGATGAAGATTTGAAACATGAGAGTTCGGAGGTTGAGAACACAAGCCATCAGGTGAGGTGTATCCAGGAGACAGTGGATGTCCGCAAGAAGGTGGAACTGGAAAGGCTGAAGAAGCAGGTGAAAGGCCTCATTAACAGGCTGAGTGAGCCCAACATGGCGTTTATAAGTGGGCAGCTGGAGGAGCTGTACATGGCCCACAGCAGGAAGGACATGAGCGATATGCTGACTGCCACCCTCATGGATGCCTGTGTCACCTCCTCAGCCATGCCCAGCCGGCTAATGATGGAGCACATCCTCCTGGTCAGCATTCTCCACCACACAGTCGGAATCGAGGTTGGCGCGTGCTTCCTGGAAGGCGTGGTGAGGAGGTTTGATGATGCCTACGGAAAGGGAGGCGAGGGGAAGGAGTGCGACAACCTGGTCACCATCGTCGCCCACTTGTACAACTTCCACGTGGTCCAGTCGCTCCTTGTCTTTGACATTTTGAGGAAACTGATAGGAACTTTCACGGAAAAAGACATCGAGCTGATTCTGTTGATGCTGAAGAACGTGGGCTTCTCGCTGAGAAAAGACAATGCTTTATCACTTAAGGAGTTGATCGCCGAGGCCCAGGCCAAAGCCAGCACCACAGGCAGCAAGTTTCAGGACCAGACCAGGATTCGGTTTATGTTGGAGACAATGCTGGCATTAAAGAACAACGACATGCGCAAGATCCCAGGCTATGACCCTGAGCCAGTGGAGAGGCTGAGGAAGCTGCAGAGGGCACTGGTGCGCAGCGCTGGCTCTGGCTCCGAGACTCAGCTCCGAATCTCCTGGGATGGCATCTTGAAGGCTGAGCAGACCGGTCGTTGGTGGATCGTGGGGTCTGCATGGAGCGGGGCCCCAATGATCGACAACAGTCGTCATGCAGCCCCACAGAAGCCACTTGCAGGGACGGTGAGCGCAAAGATGCTGGAGCTTGCCCGGAAGCAGAGGATGAACACAGATGTCAGGAGGAACATATTCTGCACAGTGATGACCAGCGAGGATTTTCTGGACGCCTTTGAAAAGCTGCTCAAGCTTGGGCTGAAGGACCAGCAGGAGCGAGAGATTGTCCACGTGCTCATGGACTGCTGCCTGCAGGAGAAAACCTACAACCCTTTCTACGCCTTCTTGGCCAGCAAGTTCTGCGGATATGAGAGGAGATTCCAGATGACTTTCCAGTTCAGCATATGGGACAAATTTCGGGACTTAGAAAATTTGCCAGCCACCAATTTCTTGAATTTGGTTCAACTGGTGGCGCACTTATTGAAGACAAAGTCTCTTCCACTTTCCATTTTAAAGGTGGTTGAATTCAGTGAATTGGACAAACCCAGAGTCCACTTTTTACGCAGAGTGTTAACTGTGCTGCTAATGGAAACAGAAGTTGAAGACTTGAGTCTAATTTTTTCAAGGGTGTCTGACAACCCAAAGCTGGGTGTGCTGCGGGAAGGCCTGAAGCTCTTCATCAGCCACTTCCTACTGAGGCACGCACAGGCCCAGCAGTGCCCCGAGGAGGCTGGTGTGCTGAGAGAGAGGGCTGGGCTCGCCACCAAGGCCCTGCAGGGCAGGGCTGCACTGCAGATGTAG

Related Sequences

XP_004860386.1 Protein

Nom1 PREDICTED: nucleolar MIF4G domain-containing protein 1 isoform X3 [Heterocephalus glaber]

Length: 850 aa      View alignments
>XP_004860386.1
MVASLKLVRRGRRRGTRLKRGSDGLGGEGALKRLKLAVEGFVRATSEAEAPGGFEGRGAAVSSRPIGRKSRKELRREKRQLRKARRLQRAGGPGPAREEGSARPPSRAREAEAAPSHCKAKVKTSPAKPKAPPASAPSAHSKAKATRTKGPSLKAEARPRKTEPSATARKRALLAANEEEDREIRKLERCLGLNKRRKKGDGSSVPLSFARDGLDYILGALEPGAGGSGLYESSGEEDEEEEESGEDEIPPDSDSNLDVDSERESEEDLEGEAHPSEDEVENVEDADDSVDPEPGGGVEGGARETRGRKRVRFAKDEDLKHESSEVENTSHQVRCIQETVDVRKKVELERLKKQVKGLINRLSEPNMAFISGQLEELYMAHSRKDMSDMLTATLMDACVTSSAMPSRLMMEHILLVSILHHTVGIEVGACFLEGVVRRFDDAYGKGGEGKECDNLVTIVAHLYNFHVVQSLLVFDILRKLIGTFTEKDIELILLMLKNVGFSLRKDNALSLKELIAEAQAKASTTGSKFQDQTRIRFMLETMLALKNNDMRKIPGYDPEPVERLRKLQRALVRSAGSGSETQLRISWDGILKAEQTGRWWIVGSAWSGAPMIDNSRHAAPQKPLAGTVSAKMLELARKQRMNTDVRRNIFCTVMTSEDFLDAFEKLLKLGLKDQQEREIVHVLMDCCLQEKTYNPFYAFLASKFCGYERRFQMTFQFSIWDKFRDLENLPATNFLNLVQLVAHLLKTKSLPLSILKVVEFSELDKPRVHFLRRVLTVLLMETEVEDLSLIFSRVSDNPKLGVLREGLKLFISHFLLRHAQAQQCPEEAGVLRERAGLATKALQGRAALQM