Details from NCBI annotation

Gene Symbol Syncrip
Gene Name synaptotagmin binding, cytoplasmic RNA interacting protein
Entrez Gene ID 101707165

Database interlinks

Part of NW_004624799.1 (Scaffold)

For more information consult the page for NW_004624799.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYNCRIP ENSCPOG00000012415 (Guinea pig)

Gene Details

synaptotagmin binding, cytoplasmic RNA interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011171, Guinea pig)

Protein Percentage 97.07%
CDS Percentage 94.99%
Ka/Ks Ratio 0.09754 (Ka = 0.0195, Ks = 0.1995)

SYNCRIP ENSG00000135316 (Human)

Gene Details

synaptotagmin binding, cytoplasmic RNA interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000358635, Human)

Protein Percentage 98.68%
CDS Percentage 96.76%
Ka/Ks Ratio 0.07498 (Ka = 0.0094, Ks = 0.1252)

Syncrip ENSMUSG00000032423 (Mouse)

Gene Details

synaptotagmin binding, cytoplasmic RNA interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133649, Mouse)

Protein Percentage 98.35%
CDS Percentage 95.22%
Ka/Ks Ratio 0.05237 (Ka = 0.0107, Ks = 0.2043)

Genome Location

Sequence Coding sequence

Length: 1824 bp    Location: 8616779..8651606   Strand: +
>XM_004860306.1
ATGGCTACAGAACATGTTAATGGAAATGGTACTGAAGAGCCCATGGATACTACTTCTGCAGTTATCCATTCAGAAAATTTTCAGACATTGCTTGATGCTGGTTTACCACAGAAAGTTGCTGAAAAACTAGATGAAATTTACGTTGCAGGGTTAGTTGCACATAGTGATTTAGATGAAAGAGCTATCGAAGCTTTAAAAGAGTTCAATGAAGACGGCGCATTGGCAGTTCTTCAACAGTTTAAAGACAGTGATCTCTCTCATGTTCAGAACAAAAGTGCCTTTTTATGTGGAGTCATGAAGACTTACAGGCAGAGAGAAAAACAGGGGACCAAAGTAGCAGATTCTAGTAAAGGACCAGATGAGGCAAAAATTAAGGCGCTCTTGGAAAGAACAGGCTACACACTTGATGTAACCACTGGACAGAGGAAGTATGGGGGACCACCTCCAGATTCCATTTATTCAGGTCAGCAGCCTTCTGTTGGCACTGAGATATTTGTGGGGAAGATCCCAAGAGATCTATTTGAAGATGAACTTGTTCCATTATTTGAAAAAGCTGGACCTATATGGGATCTTCGTCTAATGATGGATCCACTCACTGGTCTAAATAGAGGTTATGCGTTTGTCACTTTTTGTACAAAAGAAGCAGCGCAGGAGGCTGTTAAACTGTATAATAATCATGAAATTCGTTCTGGAAAACACATTGGTGTCTGCATCTCAGTTGCCAACAATAGGCTTTTTGTGGGCTCTATTCCTAAGAGTAAAACTAAGGAACAGATTCTTGAAGAATTTAGCAAAGTAACAGGTAAGTTGGATTTATTTTGTAGAAGATATGAAGATCACAAAACAGCTGCCCAGGCAAGGCGTAGGCTAATGAGTGGTAAAGTCAAGGTCTGGGGAAATGTTGGAACTGTTGAATGGGCCGACCCTATAGAAGATCCTGATCCTGAAGTTATGGCAAAGGTAAAAGTGTTGTTTGTACGCAACCTTGCCAATACTGTAACAGAAGAGATTTTAGAAAAGGCATTTAGTCAGTTTGGGAAACTGGAACGAGTGAAGAAACTTAAAGATTATGCTTTCATTCATTTTGATGAACGAGATGGTGCTGTTAAGGCTATGGAAGAAATGAATGGCAAAGACTTGGAAGGAGAAAATATTGAAATTGTTTTTGCTAAGCCACCGGATCAGAAAAGGAAAGAAAGAAAAGCTCAGAGGCAAGCAGCAAAGAATCAAATGTATGATGATTACTACTATTATGGTCCACCTCATATGCCCCCTCCAACAAGAGGTCGAGGGCGTGGAGGTAGAGGTGGTTATGGATATCCTCCTGATTATTATGGATATGAAGATTATTACGATTATTATGGCTATGATTACCATAATTACCGTGGTGGATATGAAGATCCATACTATGGTTATGAAGATTTTCAAGTTGGAGCTAGAGGAAGGGGTGGTAGAGGAGCAAGGGGTGCTGCTCCTTCCAGAGGTCGTGGGGCTGCTCCTCCCCGCGGTAGAGCCGGTTATTCACAGAGAGGAGGTCCTGGATCAGCAAGAGGCGTTCGTGGTGCGAGAGGAGGTGCCCAACAACAAAGAGGCCGCGGGGTACGTGGTGCGAGGGGTGGCCGCGGTGGAAATGTAGGAGGAAAGCGCAAAGCTGATGGGTACAACCAGCCAGATTCCAAGCGGCGCCAGACCAATAATCAGAACTGGGGCTCCCAACCCATTGCTCAGCAACCGCTCCAAGGTGGTGATCATTCTGGTAACTATGGTTACAAATCTGAAAACCAGGAGTTTTATCAGGATACTTTTGGGCAACAGTGGAAGTAG

Related Sequences

XP_004860363.1 Protein

Syncrip PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Heterocephalus glaber]

Length: 607 aa      View alignments
>XP_004860363.1
MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSIYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTGKLDLFCRRYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDHSGNYGYKSENQEFYQDTFGQQWK