Details from NCBI annotation

Gene Symbol Tpbg
Gene Name trophoblast glycoprotein, transcript variant X3
Entrez Gene ID 101720499

Database interlinks

Part of NW_004624799.1 (Scaffold)

For more information consult the page for NW_004624799.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TPBG ENSCPOG00000002388 (Guinea pig)

Gene Details

trophoblast glycoprotein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017538, Guinea pig)

Protein Percentage 89.29%
CDS Percentage 89.21%
Ka/Ks Ratio 0.1886 (Ka = 0.0627, Ks = 0.3326)

TPBG ENSG00000146242 (Human)

Gene Details

trophoblast glycoprotein

External Links

Gene Match (Ensembl Protein ID: ENSP00000358765, Human)

Protein Percentage 85.71%
CDS Percentage 85.32%
Ka/Ks Ratio 0.12926 (Ka = 0.076, Ks = 0.588)

Tpbg ENSMUSG00000035274 (Mouse)

Gene Details

trophoblast glycoprotein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000006559, Mouse)

Protein Percentage 77.62%
CDS Percentage 79.05%
Ka/Ks Ratio 0.16805 (Ka = 0.1376, Ks = 0.8191)

Tpbg ENSRNOG00000010694 (Rat)

Gene Details

trophoblast glycoprotein (Tpbg), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014326, Rat)

Protein Percentage 77.62%
CDS Percentage 79.29%
Ka/Ks Ratio 0.17433 (Ka = 0.1386, Ks = 0.7948)

Genome Location

Sequence Coding sequence

Length: 1623 bp    Location: 12230574..12226350   Strand: -
>XM_004860283.1
ATGGCCCTCCATTTCCTACTCCTTCAAGAAGGTCGCCCGGCGGACCTAGAGAGACCTAACAAAAGAGGCGAGGAGGTGCCACCCAGGGCGGCGGCTGGAGAGGCGCAGGAGGAGGAGCGCGAAGCCGGGCGTCCGGACCGCCGTGCGTACTTTCTGGAAGGGAGGGCGGGGGAGTCAGCCTGGAGGGGGACGCCCGCGGGCAAGGGGCTTGCCAAGTTCCGGCCGCGGTGTCCCTCCTCCGCGCCCACGAGAGGAAAGTTTTCTCCAGGAGCTTCCGGCCGGCCCGCGCCCTCCGGGCCCAGCCCCCGAGCCTTCGGAGCGGGCTCCGTCCCAGCCCGGCTCCGGGCGCCTCAAGCCGCGATGCCTGGGGGGTGCTCTCGGGGCCCGGCCACCGGGGACGGGCGGTTTCGGCTGGCGCGCCTGGCGCTGGTCCTCCTGGGCTGGGTCTCTTCGTCTTCTCCCACCTCCTCTGCGAGCTCCTCCACCGCCTCTGCATTGTTCCCGGCTTCGGCGGCTTCCGCTCAGCCTCCTCTGTCGAGCCAATGCCCCGCGCCTTGTGAGTGCTCCGAGGCGGCTCGCACCGTCAAGTGCGTGAACCGCAACCTGACCGAGGTGCCCGCGGACCTGCCCCCATATGTGCGCACCCTCTTCCTCACCGGCAACCAGCTGGCCTTGCTCCCCGCTGGCGCCTTCGCCCGTCGCCCGCCTCTGGCCGAGCTGGCCGCCCTCAACCTCAGCGGCAGCCGCCTGGGGAATGTGCACGCCGCTGCCTTCGAGGACCTGCCCAGCCTGCGGCAGCTAGACCTCAGCCACAACCCGCTCGCCCACCTCAGCCCCTTCGCCTTCTCGGGCATCAACGCCAGCGCCTCGACCCCCAGCCCCCTGGTGGAACTGATCCTGAACCACGTGGAGACCCCTGGGGGCCCCGACCGGAACCGAAGCGTGGAGCGCATGGTGGCAGCGGCCCTGCAGGAGCCCCACACACTTCGTGGGCTCCGTCGCCTGGAGCTGGCCAGCAATCACTTTCTTTACCTGCCCAGGGATTTGCTGTCCCAACTGCCTGGCCTCAGGCACCTGGACCTGAGTAACAATTCCCTGGTGAGCCTGACCTACCTGTCCTTTCGAAACCTTACACATCTAGAAAGCCTCCACCTAGAAGACAATGCGCTCAAGGTCCTTCACAATGGCACCCTGGCAGAATTGCAAAGCCTGGCGCATGTCAGAGTGTTTCTGGAGGACAATCCATGGGTCTGCGATTGTCACATGGTGGACATGGTGAACTGGCTCAAGGAGACCGAGATAGTGGAGGGCAAAGCCAGGCTCACCTGTGCGTTCCCGGAAAAAATGAGGAATCGAATCCTAGTGGAACTCAACATCTCTGACCTGGACTGTGATCCTATCCTCCCTCCATCCCTGCAGACTTCTTATGTATTCCTGGGTATTGTTTTAGCCCTGATAGGTGCAATTTTCCTCCTTGTTTTGTACTTGAACCGTAAGGGGATAAAAAAGTGGATGCACAACATCAGAGATGCCTGCAGGGATCACATGGAAGGGTATCATTACAGATATGAAATCAATGCGGACCCCAGATTAACAAACCTCAGTTCCAATTCAGATGTCTGA

Related Sequences

XP_004860340.1 Protein

Tpbg PREDICTED: trophoblast glycoprotein isoform X3 [Heterocephalus glaber]

Length: 540 aa      View alignments
>XP_004860340.1
MALHFLLLQEGRPADLERPNKRGEEVPPRAAAGEAQEEEREAGRPDRRAYFLEGRAGESAWRGTPAGKGLAKFRPRCPSSAPTRGKFSPGASGRPAPSGPSPRAFGAGSVPARLRAPQAAMPGGCSRGPATGDGRFRLARLALVLLGWVSSSSPTSSASSSTASALFPASAASAQPPLSSQCPAPCECSEAARTVKCVNRNLTEVPADLPPYVRTLFLTGNQLALLPAGAFARRPPLAELAALNLSGSRLGNVHAAAFEDLPSLRQLDLSHNPLAHLSPFAFSGINASASTPSPLVELILNHVETPGGPDRNRSVERMVAAALQEPHTLRGLRRLELASNHFLYLPRDLLSQLPGLRHLDLSNNSLVSLTYLSFRNLTHLESLHLEDNALKVLHNGTLAELQSLAHVRVFLEDNPWVCDCHMVDMVNWLKETEIVEGKARLTCAFPEKMRNRILVELNISDLDCDPILPPSLQTSYVFLGIVLALIGAIFLLVLYLNRKGIKKWMHNIRDACRDHMEGYHYRYEINADPRLTNLSSNSDV