Details from NCBI annotation

Gene Symbol Gopc
Gene Name golgi-associated PDZ and coiled-coil motif containing, transcript variant X1
Entrez Gene ID 101701198

Database interlinks

Part of NW_004624798.1 (Scaffold)

For more information consult the page for NW_004624798.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GOPC ENSCPOG00000010125 (Guinea pig)

Gene Details

golgi-associated PDZ and coiled-coil motif containing

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009091, Guinea pig)

Protein Percentage 94.58%
CDS Percentage 90.02%
Ka/Ks Ratio 0.07333 (Ka = 0.0284, Ks = 0.3872)

GOPC ENSG00000047932 (Human)

Gene Details

golgi-associated PDZ and coiled-coil motif containing

External Links

Gene Match (Ensembl Protein ID: ENSP00000357484, Human)

Protein Percentage 92.86%
CDS Percentage 85.57%
Ka/Ks Ratio 0.05568 (Ka = 0.0371, Ks = 0.6672)

Gopc ENSMUSG00000019861 (Mouse)

Gene Details

golgi associated PDZ and coiled-coil motif containing

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020008, Mouse)

Protein Percentage 89.89%
CDS Percentage 83.74%
Ka/Ks Ratio 0.06128 (Ka = 0.0514, Ks = 0.8382)

Gopc ENSRNOG00000000408 (Rat)

Gene Details

golgi associated PDZ and coiled-coil motif containing (Gopc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054286, Rat)

Protein Percentage 88.96%
CDS Percentage 82.14%
Ka/Ks Ratio 0.06689 (Ka = 0.0629, Ks = 0.9408)

Genome Location

Sequence Coding sequence

Length: 1395 bp    Location: 12188635..12217738   Strand: +
>XM_004860166.1
ATGTCGGCGGGCGGCCCAAGCCCGGCGGCCTCCGGAGCGGGTCCCGGGGCCGCCGCCTGCGCCGCGGGGGTCTCCCCGGGCGGGGTGTCCATGTTCCGGTGGCTGGAGGTGCTGGAGAAGGAGTTCGACAAGGCCTTCGTGGACGTGGACCTGCTGCTGGGCGAGATCGACCCGGACCAGGCGGACATCACCTACGAGGGGCGGCAGAAGATGACGAGCCTGAGCTCCTGCTTCGCGCAGCTGTGCCACAAGGCGCAGACCGTGTCGCAGATCAACCACAAGCTGGAGGCACAGCTGGTGGACCTGAGATCTGAACTGACAGAGACTCAAGCAGAGAAAGTCGTGCTGGAGAAGGAGGTGCATGACCAGCTGTTACAGTTACACTCCATCCAGCTGCAGCTTCATGCACAATCTGGGCCCAGTGTTGACTCTGGTACCATCAAGGCAAAACTGTCTGTCCCCTCTGTGGAAGAGCTGGAAAGAGAGCTTGAAGCAAACAAAAAAGGAAAAGTGAAGGAAGCCCAGCTTGAAGCGGAAGTGAAATCGCTGCGCAAAGAGAACGAAGCCCTCCGCAGACACGTCGCAGTGCTGCAGGCCGAGGTGTACGGGGCCCGGCTGGCGGCCAAGTACCTGGACAAGGAGCTGGCGGGGCGGGTCCAGCAAATACAGTTACTAGGACGAGACATGAAGGGGCCGGCTCATGATAAGCTTTGGAACCAGTTAGAAGCTGAAATCCATTTGCACCGGCACAAGACTGTCATCCGAGCCTGCAGGGGACGGAACGACTTGAAACGGCCCATGCAGGCACCTCCGGGCCACGATCAAGACTCTTTGAAGAAAAGCCAAGGCGTTGGTCCCATTAGAAAAGTTCTTCTCCTTAAGGAAGACCACGAGGGCCTCGGCATTTCAATTACAGGTGGGAAAGAACACGGTGTTCCAATCCTCATCTCTGAGATCCACCCTGGGCAGCCTGCTGACAGATGTGGAGGCCTGCACGTTGGGGATGCCATTCTGGCAGTCAATGGAGTTAACCTAAGGGACACAAAGCATAAGGAAGCTGTAACCGTACTTTCCCAGCAGAGGGGAGAGATTGAATTCGAAGTGGTGTACGTGGCTCCCGAAGTGGATTCTGATGATGAGAATGTGGAGTATGAAGATGAGAGCGGCCATCGTTACCGTCTGTACCTCGATGAGCTGGAAGGCGGTGGCAACCCTGGTGCTAGTTGCAAAGATGCCAGTGTGGAGGCCAGAGTGTTCCCAGGGTATAATAAGAAGGCAGTCACTGATGCCCAGGAGAATGGGGACCTGGGAACTTCAAGTGAGACTCCGCTGGATGATACTGCTTCGAAATTAGATGACCTGCACAGTGGTCTGTATCATAAAAAGTCTTTCTGA

Related Sequences

XP_004860223.1 Protein

Gopc PREDICTED: golgi-associated PDZ and coiled-coil motif-containing protein isoform X1 [Heterocephalus glaber]

Length: 464 aa      View alignments
>XP_004860223.1
MSAGGPSPAASGAGPGAAACAAGVSPGGVSMFRWLEVLEKEFDKAFVDVDLLLGEIDPDQADITYEGRQKMTSLSSCFAQLCHKAQTVSQINHKLEAQLVDLRSELTETQAEKVVLEKEVHDQLLQLHSIQLQLHAQSGPSVDSGTIKAKLSVPSVEELERELEANKKGKVKEAQLEAEVKSLRKENEALRRHVAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPAHDKLWNQLEAEIHLHRHKTVIRACRGRNDLKRPMQAPPGHDQDSLKKSQGVGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTVLSQQRGEIEFEVVYVAPEVDSDDENVEYEDESGHRYRLYLDELEGGGNPGASCKDASVEARVFPGYNKKAVTDAQENGDLGTSSETPLDDTASKLDDLHSGLYHKKSF