Sequence details NCBI ID: XM_004860157.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gja1
Gene Name gap junction protein, alpha 1, 43kDa
Entrez Gene ID 101726706

Database interlinks

Part of NW_004624798.1 (Scaffold)

For more information consult the page for NW_004624798.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GJA1 ENSCPOG00000015249 (Guinea pig)

Gene Details

gap junction protein, alpha 1, 43kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018201, Guinea pig)

Protein Percentage 97.12%
CDS Percentage 92.93%
Ka/Ks Ratio 0.00881 (Ka = 0.0121, Ks = 1.3701)

GJA1 ENSG00000152661 (Human)

Gene Details

gap junction protein, alpha 1, 43kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000282561, Human)

Protein Percentage 96.07%
CDS Percentage 82.02%
Ka/Ks Ratio 0.0049 (Ka = 0.0191, Ks = 3.8981)

Gja1 ENSRNOG00000000805 (Rat)

Gene Details

gap junction protein, alpha 1 (Gja1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001054, Rat)

Protein Percentage 97.12%
CDS Percentage 84.73%
Ka/Ks Ratio 0.00141 (Ka = 0.0127, Ks = 8.9985)

Genome Location

Sequence Coding sequence

Length: 1149 bp    Location: 9364312..9359004   Strand: -
Raw sequence   
>XM_004860157.1
ATGGGAGACTGGAGCGCCCTCGGGAAGCTGCTGGACAAGGTCCAGGCCTACTCCACGGCGGGCGGCAAGGTGTGGCTGTCCGTGCTGTTCATCTTCCGCATCCTGCTGCTGGGCACTGCGGTGGAGTCGGCCTGGGGCGATGAGCAGTCGGCCTTCCGCTGCAACACGCAGCAGCCGGGCTGCGAGAACGTGTGCTATGACAAGTCCTTCCCCATCTCGCACGTGCGCTTCTGGGTGCTGCAGATCATCTTCGTGTCAGTGCCCACGCTGCTGTACCTGGCGCACGTCTTCTACGTGATGCGCAAGGAGGAGAAGCTGAACAAGAAGGAGGAGGAGCTCAAGGTGGCGCAGACGGACGGCGCCAACGTGGAGATGCACCTGAAGCAGATCGAGATGAAGAAGTTCAAGTACGGCATCGAGGAGCACGGCAAGGTGAAGATGCGCGGTGGCCTGCTGCGCACCTACATCATCAGCATCCTCTTCAAGTCGATCTTCGAGGTGGCCTTCCTGCTCATCCAGTGGTACATCTACGGCTTCAGCCTGAGCGCTGTGTACACCTGCAAGCGCGACCCGTGCCCGCACCAGGTGGACTGCTTCCTGTCGCGCCCCACCGAGAAGACCATCTTCATCATCTTCATGCTGGTGGTGTCCCTGGTGTCACTGGCCCTCAACATCATCGAGCTCTTCTACGTCTTCTTCAAGGGCGTCAAGGACCGGGTCAAGGGCCGGAGCGACCCCTACCACCCGGGCAGCGGCCCGCTGAGCCCCTCCAAGGACTGCGGCTCCCCCAAGTACGCCTACTTCAACGGCTGCTCCTCGCCCACCGCACCACTGTCGCCCATGTCGCCGCCCGGGTACAAGCTGGTGACCGGGGACAGGAACAACTCCTCCTGCCGCAACTACAACAAGCAGGCCAGTGAGCAGAACTGGGCCAACTACAGCGCCGAGCAGAACCGCATGGGCCAGGCGGGCAGCACCATCTCCAACTCCCACGCGCAGCCCTTCGACTTCCCCGATGACAGCCAGAACGCCAAGAAGGCGGCGGCCGGACACGAGCTGCAGCCCCTGGCCCTCGCGGACCAGCGGCCGGCCAGCAGGGCCAGCAGCCGGGCCAGCAGCAGGCCTCGGCCTGACGACCTGGAGATCTAG

Related Sequences

XP_004860214.1 Protein

Gja1 PREDICTED: gap junction alpha-1 protein [Heterocephalus glaber]

Length: 382 aa      View alignments
>XP_004860214.1
MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPGCENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKEEELKVAQTDGANVEMHLKQIEMKKFKYGIEEHGKVKMRGGLLRTYIISILFKSIFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIELFYVFFKGVKDRVKGRSDPYHPGSGPLSPSKDCGSPKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRNYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDSQNAKKAAAGHELQPLALADQRPASRASSRASSRPRPDDLEI