Details from NCBI annotation

Gene Symbol Smpdl3a
Gene Name sphingomyelin phosphodiesterase, acid-like 3A, transcript variant X1
Entrez Gene ID 101721551

Database interlinks

Part of NW_004624798.1 (Scaffold)

For more information consult the page for NW_004624798.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMPDL3A ENSCPOG00000014059 (Guinea pig)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012662, Guinea pig)

Protein Percentage 84.13%
CDS Percentage 84.13%
Ka/Ks Ratio 0.1629 (Ka = 0.0914, Ks = 0.561)

SMPDL3A ENSG00000172594 (Human)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3A

External Links

Gene Match (Ensembl Protein ID: ENSP00000357425, Human)

Protein Percentage 77.95%
CDS Percentage 78.03%
Ka/Ks Ratio 0.16117 (Ka = 0.1364, Ks = 0.8465)

Smpdl3a ENSMUSG00000019872 (Mouse)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020022, Mouse)

Protein Percentage 77.01%
CDS Percentage 77.24%
Ka/Ks Ratio 0.16091 (Ka = 0.1443, Ks = 0.897)

Smpdl3a ENSRNOG00000000815 (Rat)

Gene Details

sphingomyelin phosphodiesterase, acid-like 3A (Smpdl3a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001081, Rat)

Protein Percentage 78.62%
CDS Percentage 77.47%
Ka/Ks Ratio 0.13848 (Ka = 0.13, Ks = 0.9386)

Genome Location

Sequence Coding sequence

Length: 1323 bp    Location: 8422877..8410048   Strand: -
>XM_004860143.1
ATGGCGCAGGCGCGCGCGCTGCTCGGCTACCTGCTGCTGGGGCTCGGCCTGGCGCTGCCCGGCGACCCCGCGGGACGCTTTTGGCACGTGACTGACCTACACTTGGACCCTACTTACCACATCACAGATGACCACACCAAGGTGTGCAATTCGTCCAAAGGCGCCAATGCCTCCAACCCGGGCCCCTTCGGGGATGTTCTGTGTGATGCTCCGTATCGACTCATTTTGTCAGCTTTTGACTTTATTAAGAATTCAGGGCAAGAAGCGTCTTTCATGATCTGGACGGGCGATAGCCCACCTCACGTTCCGGTTCCCGAACTGTCCACAGACGCTGTCGTAAAGGTGATTGCTAACATGACAGTGACCATCCAGAGCTTCTTTCCGAATCTCCAGGTGTTCCCTACACTGGGCAATCATGACTACTGGCCACAGGATCAGCTGCCCATAGCCACCAGTCAGGTGTACGACGCCGTGGCCGACCTCTGGAAAGCGTGGCTGGATGAAGAGGCCCTGAGTACCCTCAGGAAAGCTGGCTTTTATTCACAGAAAGTCCCGGGTAACCCAAACCTGAGGATCGTCAGTCTGAACACGAACTTGTACTATGGCCCCAACGCTGTGACCTTGAACCAGACGGACCCCGCACACCAGTTTGAATGGCTGGAAAATACCCTGACTAGCTCTCAGCAAAACAAAGAGAAGGTGTTCCTCATTGCGCATGTGCCCGTGGGCTACCTGCCCCAGTCCACGGGCATCACTGCGGTGCGGCAGTACTACAACGAGCGGCTGGTGGCGCTGCTCCGGAGGTACAGCGCTGTCGTCGCCGGGCAGTTCTACGGCCACATGCACAGGGACAGCCTCATGGTGCTTTCCGACGGAGAAGGACGGCCAGTGAGTTCTCTGTTTGTGTCTCCTGCTGTTACACCAGTGAGGAATGTTTTAGAAAAGGAAACCAACAATCCGGGTGTCCGCCTCTTCCAGTACAACCCTGGAGATTACACGTTATTGGACATGTTGCAGTATTACTTGAACCTGACAGAAGCAAACCTGAAGGGCGAATCCAACTGGAAGCTGGAGTACAGCCTGACTCAGACCTACGGCGTTGGAGATCTGCGGCCGCAGAGTTTATATGGACTGGCGAAGCAGTTTGCAACCCCGGACAGCAAGCAGTTCGTCAAATACTACAATTATTTCTTTGTGAGTTATGACAGCAGTGTAGTTTGTGATGAGAAGTGTAAGGCCCTGCAGATCTGTGCCATTATGAATCTTGATCGGGCTTCCTACTCAGGCTGCCTCCAGCAGCACCTTGGAGAGCGCAGGCCCTAG

Related Sequences

XP_004860200.1 Protein

Smpdl3a PREDICTED: acid sphingomyelinase-like phosphodiesterase 3a isoform X1 [Heterocephalus glaber]

Length: 440 aa      View alignments
>XP_004860200.1
MAQARALLGYLLLGLGLALPGDPAGRFWHVTDLHLDPTYHITDDHTKVCNSSKGANASNPGPFGDVLCDAPYRLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTDAVVKVIANMTVTIQSFFPNLQVFPTLGNHDYWPQDQLPIATSQVYDAVADLWKAWLDEEALSTLRKAGFYSQKVPGNPNLRIVSLNTNLYYGPNAVTLNQTDPAHQFEWLENTLTSSQQNKEKVFLIAHVPVGYLPQSTGITAVRQYYNERLVALLRRYSAVVAGQFYGHMHRDSLMVLSDGEGRPVSSLFVSPAVTPVRNVLEKETNNPGVRLFQYNPGDYTLLDMLQYYLNLTEANLKGESNWKLEYSLTQTYGVGDLRPQSLYGLAKQFATPDSKQFVKYYNYFFVSYDSSVVCDEKCKALQICAIMNLDRASYSGCLQQHLGERRP