Details from NCBI annotation

Gene Symbol Hddc2
Gene Name HD domain containing 2, transcript variant X1
Entrez Gene ID 101717485

Database interlinks

Part of NW_004624798.1 (Scaffold)

For more information consult the page for NW_004624798.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HDDC2 ENSCPOG00000013151 (Guinea pig)

Gene Details

HD domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011838, Guinea pig)

Protein Percentage 87.37%
CDS Percentage 86.03%
Ka/Ks Ratio 0.12823 (Ka = 0.072, Ks = 0.5618)

HDDC2 ENSG00000111906 (Human)

Gene Details

HD domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000381220, Human)

Protein Percentage 84.85%
CDS Percentage 82.66%
Ka/Ks Ratio 0.11052 (Ka = 0.0854, Ks = 0.7732)

Hddc2 ENSMUSG00000000295 (Mouse)

Gene Details

HD domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000304, Mouse)

Protein Percentage 84.34%
CDS Percentage 82.32%
Ka/Ks Ratio 0.09391 (Ka = 0.082, Ks = 0.8732)

Hddc2 ENSRNOG00000021442 (Rat)

Gene Details

HD domain containing 2 (Hddc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034339, Rat)

Protein Percentage 83.33%
CDS Percentage 81.99%
Ka/Ks Ratio 0.10457 (Ka = 0.0914, Ks = 0.8736)

Genome Location

Sequence Coding sequence

Length: 597 bp    Location: 6262042..6276293   Strand: +
>XM_004860138.1
ATGGCTTCCACCGCGTGCGGCTCGCGGTCCCTGCTGCAGTTCCTGCGGCTGCTGGGGCGGCTCAAGAGAGTCCCTCGGACCGGCTGGGTGTACCGAAATGTGGAAAATCCAGAGAGTGTGTCTGACCACATGTACCGCATGGCACTGATGGCCATGGTGACCAGAGATGAGGACCTTAACAAGGATCGATGCATACGCCTGGCCCTGGTTCACGATATGGCAGAGTGCATCGTTGGGGACATAGCACCAGCAGATAACGTCCCCAAAGAAGAAAAACATAGGCGAGAAGAGGAAGCCATGAAGCAGATAACCCAGCTCCTGCCGGAAGAACTCAGCGAGGAGCTCTATGACCTGTGGGAAGAGTATGAGACCCAGTCCAGTGCGGAAGCCAGGTTCGTGAAGCAGCTGGACCAGTGTGAGATGATCCTACAGGCGTCTGAGTACGAAGACCTGGAGCACAAGCCCGGGAGGCTGCAGGACTTCTTCGATTCCACTGCAGGGAAATTCAGCCACCCCGAGATAGTCCGGCTGGTTTCTGAGCTTGAGGAGGAAAGAAACGCGAACATTGCCGCTGCCCCGGGGGAGCCACAGCCCTGA

Related Sequences

XP_004860195.1 Protein

Hddc2 PREDICTED: HD domain-containing protein 2 isoform X1 [Heterocephalus glaber]

Length: 198 aa      View alignments
>XP_004860195.1
MASTACGSRSLLQFLRLLGRLKRVPRTGWVYRNVENPESVSDHMYRMALMAMVTRDEDLNKDRCIRLALVHDMAECIVGDIAPADNVPKEEKHRREEEAMKQITQLLPEELSEELYDLWEEYETQSSAEARFVKQLDQCEMILQASEYEDLEHKPGRLQDFFDSTAGKFSHPEIVRLVSELEEERNANIAAAPGEPQP