Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101713890

Database interlinks

Part of NW_004624798.1 (Scaffold)

For more information consult the page for NW_004624798.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CRB1 ENSCPOG00000010025 (Guinea pig)

Gene Details

crumbs homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008998, Guinea pig)

Protein Percentage 81.42%
CDS Percentage 87.54%
Ka/Ks Ratio 0.45763 (Ka = 0.1066, Ks = 0.2328)

CRB1 ENSG00000134376 (Human)

Gene Details

crumbs homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000356370, Human)

Protein Percentage 78.73%
CDS Percentage 85.07%
Ka/Ks Ratio 0.37436 (Ka = 0.1219, Ks = 0.3257)

Crb1 ENSMUSG00000063681 (Mouse)

Gene Details

crumbs homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000060769, Mouse)

Protein Percentage 72.58%
CDS Percentage 79.25%
Ka/Ks Ratio 0.31046 (Ka = 0.1691, Ks = 0.5448)

Crb1 ENSRNOG00000010903 (Rat)

Gene Details

crumbs homolog 1 (Drosophila) (Crb1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037018, Rat)

Protein Percentage 72.43%
CDS Percentage 78.73%
Ka/Ks Ratio 0.28143 (Ka = 0.1677, Ks = 0.5959)

Genome Location

Sequence Coding sequence

Length: 4041 bp    Location: 2999338..2861520   Strand: -
>XM_004860130.1
ATGAAAGATCCTTGCTCCTCCAGTCCTTGCCAAGGAATTGTCACTTGTGTGAATGTCCCTGGAGAAAGGAGCTTTCAGTGCCAGTGCCCTCCCGGGTACAGTGGGCTGACGTGTGAAATTGCCATTGGCTCCTGTGGTGCGGACTCCTGCCAACATGGAGGTGTTTGCCACCCCGACCCTGTGCACCGGGCCTGCATCTGCCCTGTTGGGTATGGAGGAAGATTCTGTGAGATAGATCACAATGAGTGTGCCTCTGGCCTTTGCCACAACGGGGCTGTGTGTCAGGATGGAATCGATGGCTATTTCTGCTTCTGTGTCCCAGGATATCAAGGGAGGCACTGTGACTTGGAAGTAGATGAATGTGTTTCAGATCCCTGCAAGAATGAGGCTACATGCCTCAATGAGATAGGAAGATACACTTGTACCTGCCCACAAGGTTATTCTGGTGTCAACTGTGAATTACAAATTGATGAATGTTGGTCCCAGCCTTGTCTAAATGATGCAACTTGTCAGGATGCTCTGGGGGCTTATTTCTATGACTGCGCCCCTGGATTCCTAGGAGATCACTGTGAACTCAGCTTTGATGAGTGTCTCCATGTGTCTCAGCTGTGTCTCATGTGTCTCCATGGAGGGTTGTGTGTGGACGGAGCAAATAGATACAGCTGTAACTGCACAGGTAGTGGATTCACAGGAACACACTGTGAGACCTTGATGCCTCTCTGTTGGTCAAAATCTTGTCACAATAATGCTACCTGTGAAGACAGTGTTGACAATTACATTTGTCACTGTTGGCCTAGATACACAGGTGCCCAGTGTGAGACAGACATAAACGAGTGCAGGAGTGATCCCTGCCAGTCTGGCGGGGAGTGTATGGAGCTGTCCTCAGAGAAGCAATATGGACGCATTGCCCAGCTGCCTTCTTCATTCAGCTACCACAGCGCCGCAGGTTATGTTTGTATTTGTCGGCCTGGATTCACAGGAATCCACTGTGAAGAAGACATCAATGAATGTTTATCAAAACCCTGCCAAAATGGTGGCACTTGTGAGAACTTGCCTGGAAATTATACTTGTCATTGCTCATTTGATAACATTTCTAGAACATTTTATGGAGGACAAGACTGTTCTGAGATTCTCTTGGGCTGCACACATTACCAATGTCTAAATAATGGAATTTGCAACCCTCACTTCCAAAATGGCCAACATGGATTCAGCTGCCTGTGTCCATCTGGCTACACTGGGTCACTGTGTGAAACTGTCACCACACTTTCATTCGAGGGCAGTGGCTTCCTGTGGGTCACAAGTGGCTCGCATACAACCCAGAGCTCAGATTGTAGCATTNTCAGATTTCAGACTGTTCAGTCCATGGCGCTTCTACTTTTCTGGGGCAACAGAGACATGTTTGCAAAACTGGAGTTGCTAAGTGGCTACATTCACTTATCAATTCAAGTCCATAATTGGTCAAAGGTACTTCTGTACATTTCCCACAACACCAGCAATGGACAGTGGCACTCAGTGGAGGTGATATTTGCAGAGGCTGTGACCCTTTCCTTAATGGACAACTCCTGTAAGGAGAAATGCATCACTAGAGCTCCTTCTCCGTTTGAAAGTAATCAATCCATGTGTGCTTTTCAGAACTCTTTTTTGGGTGGTTTACCAGTGGAAATGACCGGAGATGGTGTTGCACTACTTAACATCTATGATACAGCATTTGCACCTTCATTTGTAGGCTGTCTCCAAGACATTAAATTTGATTCGAATCATATTACCCTGGAGAACATTTCATCCAGCTTGTCATTAAATATCAAGGCAGGCTGCATGCAAAAGGATTGGTGTGAAAGTCAACCTTGTCAAAATAGAGGACGCTGCATCAACTTGTGGCTTGGGTACCTGTGTGACTGCTACAGGCCCGGTGCAGGCCCCAACTGTCTGAAAGAGTATGTGGCAGGCAGATTTGGCCAGGACGACTCTGTTGGATATGCTGTCTTTAAGGTTGATGAAAATCATGGACAGAACTTCAGCCTCTCCATGTTTGTGCGAACACGTCGACCATCAGGCTTCCTTCTAGCTTTGGAAAACAGCACTTATCACTACCTTCGTGTCTGGCTAGAGCACGGCAGACTAGCATTGCTGACTCCAGGCTCTCCAAAGTTTCTCGGAAAATTGGTTCCAAATGACAGAAATGTCAACTTAATATCTCTGAAAATCAAGCCAAGTAAAATTGAACTGTATCAGGCTTCACAAATGCTAGGATTTATTTCTGCTCCTATGTGGAAAATCCAAAAGGGAAATGTCATCTACATTGGTGGCCTGCCCTACAGGCAAGAGACTGAAGTTAATGGTGGGTCCTTCAAAGGCTGTATTCAAGATGTAAGATTAAACAACCAGAATCTGGAATTCTTCCCAAATTCAACAAACAGTGCATCCCGCCATCCAATTCTTGTCAACGTGGTCCAAGGTTGTCCTGGAGACAACGTTTGCAAGTCCAACCCCTGCCGCAGTGGTGGTGTCTGCTATACCCTGTGGGACAACTTCTGTGCCTGCTCTGTGAACACAGCTGGGAGAGGCCGTGAGGAANTTCGCTGGTGTGAACTCAGCCCCTGTCCTCCCACTGCCCACTGCCAACTGGTGCCCCAAGGCTTTGAATGCGTTGGAAATGCTGTTTTGAATGGACAAAGCAGTGAAATATTGTTCAGAAGCAATGGGAATATTACCAGAGAGCTCACTAATATCACANTTGGTTTCAGAACAAAGGATGCAAATGTGAGAATACTGCACACTGAAAATGAGCCTGCATTTCTTAATATTAGCATTCAAGATTCCCGATTATTTTTTCAGTTACAGACTGGCAGCAATTTCTATATTCTGCACCTGAGAAATCGGCAGGCAGTGAACGATGGCACGTGGCACCAAGTGACTCTTTCCACGACAGATCCATTGGCCCAGGCCTCCAGGTGGCAGATGGGACTGGACAACCAAACAGCTTTTGTGACCAGTGCAGTTGCTACTGGAAGCCTCAACTTTTTGAAAGACAATACAGACATTTATGTGGGTGACCGAACTACTGACAACAAGAAGGGCTTTCAAGACTGTCCAAGTACAATAGAAATTGGAGGCATTTATCTCTCTTACTTTGAAAATGTTCATGGTTTCACAAATAAACATCAGAAAGAGCAGTTTCTCAAAATCTCTACAAATTCAGTGCATACAGGCTGTTTGCAGTTAAATGCCTACTACTCCAACCCCTGTTTGCATGGAGGAAATTGTGAAGATCTCTACAGCTCTTACCGCTGTTCCTTTTCCTTGGGATGGTCAGGAACACACTGTGAACTCAACATAGATGAATGCTTTTCAAACCCCTGTATCCATGGCAACTGCTCTGATAGAGTTGCAGCCTACCATTGCAGGTGTGAGCCTGGATATGCTGGTGAGCCTGGATATGCTGGTGTGAACTGTGAAGTAGATATGGGCAATTGCCACAGTCACCAGTGTGCAAATGGAGCCACCTGCGTGAGCGACACTAATGGCTATTCTTGCCTCTGTTTGGGAAATTTTACAGGAAAATTTTGCAGACACAGCAGATTACCCTCAACCGTCTGTGGGAACAAGAGCGCAAATCTTACCTGTTGCAATGGAGGGAACTGCACAGAATTCCATGCTGAATTAAAATGCATGTGCCGGCCGGGTTTTACTGGAGAATGGTGTGAGGAGGACACCAACGAGTGCGCCTCGGATCCGTGTCTCCACGGAGGCGTGTGCCGTGATTTACCCAATGGGTTCCAGTGCCTCTGCGACGTGCCCTTCGCGGGCGAGCGCTGCGAGCTGGATTTGGCAGGTGGCGTGACCTCGGACATTTTTGCTGTCCTTGGTTCAGTGATTTTAGTCTTGCTACTCCTCCTCTCGCTAGCTGTGGTCACTTCTATTGTCACCTCCCACAAGAGGGCAGCTCAGGGAGCCTACAACCCGAGCCAGCAGGAAAAAGAGGGTGCTCGAGTGGAAATGTGGAGCAGGATGCCACCCCCCGCGACGGAGAGGCTGCTCTAG

Related Sequences

XP_004860187.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: protein crumbs homolog 1 [Heterocephalus glaber]

Length: 1346 aa      View alignments
>XP_004860187.1
MKDPCSSSPCQGIVTCVNVPGERSFQCQCPPGYSGLTCEIAIGSCGADSCQHGGVCHPDPVHRACICPVGYGGRFCEIDHNECASGLCHNGAVCQDGIDGYFCFCVPGYQGRHCDLEVDECVSDPCKNEATCLNEIGRYTCTCPQGYSGVNCELQIDECWSQPCLNDATCQDALGAYFYDCAPGFLGDHCELSFDECLHVSQLCLMCLHGGLCVDGANRYSCNCTGSGFTGTHCETLMPLCWSKSCHNNATCEDSVDNYICHCWPRYTGAQCETDINECRSDPCQSGGECMELSSEKQYGRIAQLPSSFSYHSAAGYVCICRPGFTGIHCEEDINECLSKPCQNGGTCENLPGNYTCHCSFDNISRTFYGGQDCSEILLGCTHYQCLNNGICNPHFQNGQHGFSCLCPSGYTGSLCETVTTLSFEGSGFLWVTSGSHTTQSSDCSIXRFQTVQSMALLLFWGNRDMFAKLELLSGYIHLSIQVHNWSKVLLYISHNTSNGQWHSVEVIFAEAVTLSLMDNSCKEKCITRAPSPFESNQSMCAFQNSFLGGLPVEMTGDGVALLNIYDTAFAPSFVGCLQDIKFDSNHITLENISSSLSLNIKAGCMQKDWCESQPCQNRGRCINLWLGYLCDCYRPGAGPNCLKEYVAGRFGQDDSVGYAVFKVDENHGQNFSLSMFVRTRRPSGFLLALENSTYHYLRVWLEHGRLALLTPGSPKFLGKLVPNDRNVNLISLKIKPSKIELYQASQMLGFISAPMWKIQKGNVIYIGGLPYRQETEVNGGSFKGCIQDVRLNNQNLEFFPNSTNSASRHPILVNVVQGCPGDNVCKSNPCRSGGVCYTLWDNFCACSVNTAGRGREEXRWCELSPCPPTAHCQLVPQGFECVGNAVLNGQSSEILFRSNGNITRELTNITXGFRTKDANVRILHTENEPAFLNISIQDSRLFFQLQTGSNFYILHLRNRQAVNDGTWHQVTLSTTDPLAQASRWQMGLDNQTAFVTSAVATGSLNFLKDNTDIYVGDRTTDNKKGFQDCPSTIEIGGIYLSYFENVHGFTNKHQKEQFLKISTNSVHTGCLQLNAYYSNPCLHGGNCEDLYSSYRCSFSLGWSGTHCELNIDECFSNPCIHGNCSDRVAAYHCRCEPGYAGEPGYAGVNCEVDMGNCHSHQCANGATCVSDTNGYSCLCLGNFTGKFCRHSRLPSTVCGNKSANLTCCNGGNCTEFHAELKCMCRPGFTGEWCEEDTNECASDPCLHGGVCRDLPNGFQCLCDVPFAGERCELDLAGGVTSDIFAVLGSVILVLLLLLSLAVVTSIVTSHKRAAQGAYNPSQQEKEGARVEMWSRMPPPATERLL