Details from NCBI annotation

Gene Symbol Lhx9
Gene Name LIM homeobox 9, transcript variant X2
Entrez Gene ID 101711602

Database interlinks

Part of NW_004624798.1 (Scaffold)

For more information consult the page for NW_004624798.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LHX9 ENSCPOG00000012491 (Guinea pig)

Gene Details

LIM homeobox 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011239, Guinea pig)

Protein Percentage 99.48%
CDS Percentage 96.56%
Ka/Ks Ratio 0.01347 (Ka = 0.0022, Ks = 0.1656)

LHX9 ENSG00000143355 (Human)

Gene Details

LIM homeobox 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000356357, Human)

Protein Percentage 97.94%
CDS Percentage 93.99%
Ka/Ks Ratio 0.04967 (Ka = 0.0137, Ks = 0.2759)

Lhx9 ENSMUSG00000019230 (Mouse)

Gene Details

LIM homeobox protein 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107657, Mouse)

Protein Percentage 96.65%
CDS Percentage 91.32%
Ka/Ks Ratio 0.05266 (Ka = 0.021, Ks = 0.398)

Lhx9 ENSRNOG00000010357 (Rat)

Gene Details

LIM homeobox 9 (Lhx9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013873, Rat)

Protein Percentage 98.97%
CDS Percentage 92.61%
Ka/Ks Ratio 0.01153 (Ka = 0.0045, Ks = 0.3932)

Genome Location

Sequence Coding sequence

Length: 1167 bp    Location: 2526597..2509348   Strand: -
>XM_004860125.1
ATGCTGAACGGCACCACGCTAGAGGCAGCCATGCTCTTCCACGGGATCTCCGGAGGCCACATCCAAGGCATCATGGAAGAGATGGAGCGCAGATCCAAGACCGAGGCCCGTTTGGCCAAAGGCGCCCAACTCAACGGCCGCGATGCGGGAATGCCCCCGCTGAGCCCGGAGAAGCCCGCTCTGTGCGCGGGATGTGGGGGCAAGATCTCCGACAGGTACTACTTGCTGGCCGTGGACAAGCAGTGGCATCTGAGGTGCCTGAAGTGCTGTGAATGTAAGCTGGCGCTCGAGTCTGAGCTCACCTGCTTCGCCAAGGACGGCAGCATTTACTGCAAGGAGGATTACTACAGAAGGTTCTCTGTGCAGAGATGTGCCCGCTGCCACCTTGGCATTTCTGCCTCCGAGATGGTCATGCGCGCCCGAGACTCTGTCTACCACCTGAGCTGCTTCACCTGCTCCACCTGCAACAAGACTCTGACCACGGGCGACCATTTCGGCATGAAGGACAGCCTGGTGTACTGCCGCGCCCACTTCGAGACCCTCTTGCAAGGAGAGTATCCACCGCAGCTGAGCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTGGCCCTTCCTTACTTCAACGGAACCGGCACCGTGCAGAAAGGGCGGCCCCGGAAGCGGAAGAGCCCGGCGCTGGGAGTGGACATCGTCAATTACAACTCCGGTTGTAACGAAAATGAAGCAGACCATTTGGACCGGGACCAGCAGCCTTATCCACCATCACAAAAGACCAAGCGTATGCGAACCTCCTTCAAGCACCATCAGCTCCGGACCATGAAATCCTACTTTGCCATCAACCACAACCCGGATGCCAAGGACCTCAAGCAGCTTGCTCAGAAAACAGGCCTGACTAAAAGAGTTTTGCAGGTTTGGTTCCAAAACGCACGAGCCAAATTCAGAAGGAACCTTTTGCGGCAGGAGAATGGGGGTGTTGATAAAGCCGATGGCGCGTCGCTTCCGGCCCCGCCCTCAGCAGACAGCGGAGCCCTCACTCCACCCGGCACTGCGACCACTTTAACAGACCTGACCAATCCCACTATCACTGTAGTGACATCTGTGACCTCTAACATGGACAGCCACGAATCCGGAAGCCCCTCACAAACTACCTTAACGAACCTTTTCTAA

Related Sequences

XP_004860182.1 Protein

Lhx9 PREDICTED: LIM/homeobox protein Lhx9 isoform X2 [Heterocephalus glaber]

Length: 388 aa      View alignments
>XP_004860182.1
MLNGTTLEAAMLFHGISGGHIQGIMEEMERRSKTEARLAKGAQLNGRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNSGCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENGGVDKADGASLPAPPSADSGALTPPGTATTLTDLTNPTITVVTSVTSNMDSHESGSPSQTTLTNLF