Details from NCBI annotation

Gene Symbol Ptprc
Gene Name protein tyrosine phosphatase, receptor type, C
Entrez Gene ID 101710515

Database interlinks

Part of NW_004624798.1 (Scaffold)

For more information consult the page for NW_004624798.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTPRC ENSCPOG00000009460 (Guinea pig)

Gene Details

protein tyrosine phosphatase, receptor type, C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008492, Guinea pig)

Protein Percentage 75.11%
CDS Percentage 82.94%
Ka/Ks Ratio 0.47891 (Ka = 0.1646, Ks = 0.3437)

PTPRC ENSG00000081237 (Human)

Gene Details

protein tyrosine phosphatase, receptor type, C

External Links

Gene Match (Ensembl Protein ID: ENSP00000411355, Human)

Protein Percentage 72.91%
CDS Percentage 79.24%
Ka/Ks Ratio 0.34681 (Ka = 0.1877, Ks = 0.5412)

Ptprc ENSMUSG00000026395 (Mouse)

Gene Details

protein tyrosine phosphatase, receptor type, C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000138350, Mouse)

Protein Percentage 68.19%
CDS Percentage 73.29%
Ka/Ks Ratio 0.27418 (Ka = 0.2385, Ks = 0.8699)

Ptprc ENSRNOG00000000655 (Rat)

Gene Details

protein tyrosine phosphatase, receptor type, C (Ptprc), transcript variant 4, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063859, Rat)

Protein Percentage 67.55%
CDS Percentage 72.34%
Ka/Ks Ratio 0.22941 (Ka = 0.2345, Ks = 1.0221)

Genome Location

Sequence Coding sequence

Length: 3432 bp    Location: 1814596..1700732   Strand: -
>XM_004860122.1
ATGACCATGTATTTGTGGTTTAAACTTTTGGCATTTGGCTTTGCCGTCCTGGATACAGATATATTTGTTACAGGGCAAATTGTGACTACTTCTGCTGGTCTCGTCTCTGTAGCCACCGCAGCATCCACACAGAGCCCTGCAGCAAGCACTCTCCCGCCAAGCACAGCAATAGTTCCTACCACAGCCTCAACTCCATGCGTTGAAAAATATGGTGATGTCTCTGTGACATACACATATGACAAGAACAGTACATTATTTAGAGCAAAACTAAATCTTCCTGCTACCGCGACATGTAATTCTGTGAAATGTGAAGACTTGGAAAATCTAAGAGAATGTTCACATCCTAGTATTGAAATAGCTGATGATTCATGTCATCCACCTTCAGTTTTCCAATTAGATGTACCACCAGAATATGAAAAGTTTCAGTTAATTGACTGTACACCAAAAGAAGTAGCAGATACTTCAATTCATTTATGTTGGGAAAAGGAGCATTTTAATTGTACTGAAAATTTTAGATATGAATTTCAATGTGGTAATTTCCAATTTTATAACCAATCAATTGAATTAAAAGGCCTTCTTCCCAAAACAAAGTATAACTGTAGTTCACAAGTGTCCTATAAAGGCCAGAGCTACAGAAATGAAATTATATATGTCGAAACAGATTGGGGAGCTCCAGGAGAGCCTCAGGTTACTTGTAAAGGTACAAATATTACAGGAGAAATTGTCTGGCTTCCCCCAGATAAATCAAATGTATCTGGATTTTATCTTTCTTATTTGGAAACATCAGGAAAAGAAAAAGACAAATTTATCAATCTGAATGCGAACGTGACCAAATATAATTTGGAACTTTTGGACCCTTATACAAACTATCATGTATCATTATTTGCCTATGTCACAGCAAAAGTGCAGCGTAACGGAAGTGCTGCGACCTGTGAATTTCAGACAAAGCCTGGACGTCCAAGCCGGGTTCAGTCACTGCAAGTATTTCAGACTGCAGATAATAGTGTGGTTGTCAGTTGTAACAAACCTGATAAGATTAATGGCCCTGGTGTGAGTTATGAGTTGGAAGTCAGAGTTAAAAATGATCTGACTAGAAATGTCTCCAATAAGACCTGCACATTTACTTTATCAGGTCTTTGGTATTCAACAGACTATGAGTTTTGGGTATATCCCGTCAATGCTTTTTATAAGGGAGAGCCAGCTAGAATACCTCACCGAACATCTTATAATTCCAAAGTACTGATTGCATTTCTGGTATTTCTGATTATTGTGACATCGATAGCTCTGCTTGTTGTTCTCTATAAAATATATGATCTGCACAAGAAGAGATCCAGCAACTTAGATGAAGAACAGGAACTTGTTGTAAAAGATGATGAAAAACAACTGATGACTGTGGAGCCAATTCAGGCGGATGTTCTGTTGGAAACATATAAGAGAAAAATTGCTGATGAAGGTCGACTTTTTCTGGCTGAATTTCAGAGCATCCCACGTGTGTTCAGTAAGTTTTCTATCAAGGATGCTCGAAAGCCTTTTAACCAAAATAAAAACCGATATGTTGACATCCTTCCCTATGACTATAACCGTGTTGAACTCTCTGAAATAAATGGAGATGCAGGGTCCACCTATATAAATGCCAGCTATATTGACGGTTTCAAAGAACCCAGGAAATACATTGCTGCTCAAGGACCCAGGGATGAAACTGTTGATGATTTCTGGAGGATGATCTGGGAACAGAAAGCTACAGTAATTGTCATGGTTACTAGGTGCGAGGAAGGAAACAGGAATAAATGTGCAGAATACTGGCCCTCAATGGAAGAAGGCACTCGGACTTTTGGAGATGTTGTTGTAAAGATCAATGAGCATAAGAGATGCCCAGATTATATCATCCAGAAAATGAACATTACAAACAAAAAAGAAAAAGGAACTGGAAGAGAGGTGACTCACATTCAGTTTACAAGCTGGCCGGACCACGGGGTACCCGAAGAACCTCACCTGCTGCTCAAACTGAGAAGGAGAGTGAACGCTTTCAGCAACTTCTTCAGTGGCCCCATCGTAGTACACTGCAGCGCTGGTGTCGGACGCACGGGCACCTACATTGGAATCGACGCCATGCTGGAAGGCTTGGAAGCAGAGGGCAAGGTGGATGTTTACGGTTATGTTGTCAAGCTCCGGCGACAGAGATGCCTCATGGTGCAAGTGGAGGCACAGTATATCCTGATGCATCAGGCTTTAGTGGAATACAACCAGTTTGGAGAAACAGAAGTAAATTTGGCTGACTTACATTCACATTCATATCTACATAACATGAAGAAAAGAGACCCACCCAGTGAGCCATCTCCACTGGAGGCTGAATTCCAGAGACTTCCTTCATATAGAAGCTGGAGAACACAGCATATTGGACATAAAGAGGAAAATAAAACGAAAAACAGAAATTCTAATGTTATTCCATATGATTTTAACAGAGTGGCACTTAAACATGAATTGGAACTGAGCAAAGAGAGCGAGCATGATTCAGATGAATCATCTGATGATGACAGTGATTCTGAGGAAACAAGCAAATACATCAATGCATCTTTTGTAATGAATTACTGGAAACCGGAAATGATGATTGCTGCTCAAGGACCACTGAAAGAGACCATTGTTGACTTCTGGCAGATGATATTCCAAAGAAAAGTCAAGGTTATTGTTATGTTGACAGAGCTGAAGCATGGAGACCAGGAAATCTGTGCTCAGTACTGGGGAGAGGGAAAGCAAACATATGGAGATTTAGAAGTTCACATCAAAGACACAAATATATCTTCAATGTACACAGCCCGTGAATTTGAACTGAGACATTCCAAGAGGAAAGACACTCGAACTGTGTACCAGTACCAATATACTAACTGGAATGTGGACCAGCTGCCTGCAGAAACCAAAGAATTAGTCTCAATGATTCAAGCCCTAAAACAGAAACTTCCCAAGAAGACTTTCACTGAAGGGAATAAGTATCACAACAGTGTGCCTATCCTAGTTCACTGCAGAGATGGATCTGAGAAAACAGGGGTCTTTTGTGCTTTGCTGAATCTCATGAAAAGTGCAGAAACAGAAGAAGTAGTAGATGTTTTTCAAGTAGTGAAATCTCTACGCAAAGCTAGGCCAGGCATGATTTCCACATATGAGCAATATGAATTCCTCTATGACATTATTGCCAGCACCTACCCTGCCCAGAATGGACAAGTAAAGAAAAACAGCAATCAAGAAGATAAAATTGAATTTGATAATGAAGTGGACAAAGCAAAGCAAGATGCTAACTGTATCAGTTCAACCGGTGCCTCAGATCAGACCCAGGAAGGAGTCGAAGAGGCAGAAGGATGTAAATATACAAGCAGTTCAGAGAGGCCAGAACATTCTCCCAATGGCCCTGCAAGTCCAGCTTCAGCTGAGAGTTCATAG

Related Sequences

XP_004860179.1 Protein

Ptprc PREDICTED: receptor-type tyrosine-protein phosphatase C [Heterocephalus glaber]

Length: 1143 aa      View alignments
>XP_004860179.1
MTMYLWFKLLAFGFAVLDTDIFVTGQIVTTSAGLVSVATAASTQSPAASTLPPSTAIVPTTASTPCVEKYGDVSVTYTYDKNSTLFRAKLNLPATATCNSVKCEDLENLRECSHPSIEIADDSCHPPSVFQLDVPPEYEKFQLIDCTPKEVADTSIHLCWEKEHFNCTENFRYEFQCGNFQFYNQSIELKGLLPKTKYNCSSQVSYKGQSYRNEIIYVETDWGAPGEPQVTCKGTNITGEIVWLPPDKSNVSGFYLSYLETSGKEKDKFINLNANVTKYNLELLDPYTNYHVSLFAYVTAKVQRNGSAATCEFQTKPGRPSRVQSLQVFQTADNSVVVSCNKPDKINGPGVSYELEVRVKNDLTRNVSNKTCTFTLSGLWYSTDYEFWVYPVNAFYKGEPARIPHRTSYNSKVLIAFLVFLIIVTSIALLVVLYKIYDLHKKRSSNLDEEQELVVKDDEKQLMTVEPIQADVLLETYKRKIADEGRLFLAEFQSIPRVFSKFSIKDARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSTYINASYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRTFGDVVVKINEHKRCPDYIIQKMNITNKKEKGTGREVTHIQFTSWPDHGVPEEPHLLLKLRRRVNAFSNFFSGPIVVHCSAGVGRTGTYIGIDAMLEGLEAEGKVDVYGYVVKLRRQRCLMVQVEAQYILMHQALVEYNQFGETEVNLADLHSHSYLHNMKKRDPPSEPSPLEAEFQRLPSYRSWRTQHIGHKEENKTKNRNSNVIPYDFNRVALKHELELSKESEHDSDESSDDDSDSEETSKYINASFVMNYWKPEMMIAAQGPLKETIVDFWQMIFQRKVKVIVMLTELKHGDQEICAQYWGEGKQTYGDLEVHIKDTNISSMYTAREFELRHSKRKDTRTVYQYQYTNWNVDQLPAETKELVSMIQALKQKLPKKTFTEGNKYHNSVPILVHCRDGSEKTGVFCALLNLMKSAETEEVVDVFQVVKSLRKARPGMISTYEQYEFLYDIIASTYPAQNGQVKKNSNQEDKIEFDNEVDKAKQDANCISSTGASDQTQEGVEEAEGCKYTSSSERPEHSPNGPASPASAESS