Sequence details NCBI ID: XM_004860085.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Phf6
Gene Name PHD finger protein 6, transcript variant X2
Entrez Gene ID 101713183

Database interlinks

Part of NW_004624797.1 (Scaffold)

For more information consult the page for NW_004624797.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHF6 ENSCPOG00000013211 (Guinea pig)

Gene Details

PHD finger protein 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011893, Guinea pig)

Protein Percentage 98.57%
CDS Percentage 96.1%
Ka/Ks Ratio 0.03721 (Ka = 0.0062, Ks = 0.1672)

PHF6 ENSG00000156531 (Human)

Gene Details

PHD finger protein 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000329097, Human)

Protein Percentage 99.45%
CDS Percentage 96.89%
Ka/Ks Ratio 0.01562 (Ka = 0.0023, Ks = 0.1496)

Phf6 ENSMUSG00000025626 (Mouse)

Gene Details

PHD finger protein 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000077971, Mouse)

Protein Percentage 96.7%
CDS Percentage 92.49%
Ka/Ks Ratio 0.03981 (Ka = 0.0144, Ks = 0.3624)

Genome Location

Sequence Coding sequence

Length: 1095 bp    Location: 14081425..14130627   Strand: +
Raw sequence   
>XM_004860085.1
ATGTCAAGCTCAGTTGAACAGAAAAAGGGGCCTACAAGACAGCGCAAATGTGGCTTTTGTAAGTCAAATAGAGACAAGGAATGTGGACAGTTACTAATATCAGAAAACCAGAAGGTGGCAGCACACCATAAGTGCATGCTCTTTTCATCTGCTTTGGTATCATCACATTCTGATAATGAGAGTCTTGGTGGATTTTCTATTGAAGATGTCCAAAAGGAAATTAAAAGAGGCACGAAGCTGATGTGTTCTTTGTGCCACTGTCCTGGAGCAACAATTGGTTGTGATGTGAAAACATGTCACAGGACATACCACTACCACTGTGCATTGCATGATAAAGCTCAAATACGAGAGAAACCTTCACAAGGAATTTACATGGTTTATTGTCGAAAACACAAGAAAACTGCACATAATTCGGAAGCTGATTTAGAAGAAAGTTTTAATGAACGTGAACTGGAGCCCTCATCCCCAAAAAGTAAAAAGAAAAGTCGCAAAGGAAGACCGAGAAAAACTAATTTTAAAGGACTATCGGAAGATACCAGGTCCACATCCTCCCATGGAACAGATGAAATAGAAAGTAGTTCCTATAGAGATAGGTCTCCACACAGAAGCAGCCCCAGTGACACCAGGCCTAAATGTGGATTTTGTCATGTAGGGGAGGAAGAAAATGAAGCAAGAGGAAAACTGCATATATTTAATGCCAAGAAGGCAGCTGCACATTATAAGTGTATGTTGTTTTCTTCTGGCACAGTCCAGCTCACGACAACATCAAGAGCAGAGTTTGGAGATTTTGATATTAAAACTGTACTTCAGGAGATTAAGCGAGGAAAAAGAATGAAATGTACACTTTGCAGTCAGCCTGGTGCTACTATTGGATGTGAAATAAAAGCCTGTGTGAAGACCTACCATTACCACTGTGGAGTACAAGACAAAGCTAAATACATTGAAAATATGTCACGGGGAATTTACAAACTATATTGTAAAAACCATAGTGGAAATGATGAGAGAGATGAAGAAGATGAGGAACGAGAGAGTAAAAGCCGAGGAAAAGTAGAAATTGATCAGCAACAAACTCAGCAGCAACTTAACGGAAACTAG

Related Sequences

XP_004860142.1 Protein

Phf6 PREDICTED: PHD finger protein 6 isoform X2 [Heterocephalus glaber]

Length: 364 aa      
>XP_004860142.1
MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLLISENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNERELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEIESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQTQQQLNGN