Details from NCBI annotation

Gene Symbol Gpc4
Gene Name glypican 4
Entrez Gene ID 101711237

Database interlinks

Part of NW_004624797.1 (Scaffold)

For more information consult the page for NW_004624797.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPC4 ENSCPOG00000001353 (Guinea pig)

Gene Details

glypican 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001227, Guinea pig)

Protein Percentage 96.01%
CDS Percentage 93.35%
Ka/Ks Ratio 0.08207 (Ka = 0.0201, Ks = 0.245)

GPC4 ENSG00000076716 (Human)

Gene Details

glypican 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000359864, Human)

Protein Percentage 95.32%
CDS Percentage 91.37%
Ka/Ks Ratio 0.067 (Ka = 0.0238, Ks = 0.3556)

Gpc4 ENSMUSG00000031119 (Mouse)

Gene Details

glypican 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033450, Mouse)

Protein Percentage 93.35%
CDS Percentage 88.55%
Ka/Ks Ratio 0.06237 (Ka = 0.0325, Ks = 0.5207)

Gpc4 ENSRNOG00000002413 (Rat)

Gene Details

glypican 4 (Gpc4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003282, Rat)

Protein Percentage 92.09%
CDS Percentage 87.47%
Ka/Ks Ratio 0.06838 (Ka = 0.0388, Ks = 0.568)

Genome Location

Sequence Coding sequence

Length: 1671 bp    Location: 13116180..13005310   Strand: -
>XM_004860080.1
ATGGCACGGTTCGGCTTGCCCGCGCTTCTTTGCACCCTGGCCGTGGTTAGCGCCATGCTGCTGGCTGCCGAGCTCAAGTCGAAAAGTTGTTCAGAAGTACGACGTCTCTACGTGGCCAAAGGCTTCAACAAGAATGATGCCCCGCTACACCAGATCAACGGTGATCATTTGAAGATCTGTCCCCAGGGTTATACCTGCTGCTCTGAAGAGATGGAGGAGAAGTACAGCCTGCAAAGTAAAGATGATTTCAAAAATGTGGTCACTGAACAGTGCAATCATTTGCAAGCCGTCTTCGCTTCCCGTTATAAGAAGTTTGATGAATTCTTCAAAGAACTTCTAGAGAATGCAGAGAAATCCCTGAATGATATGTTTGTGAAAACATATGGCCGCTTATACATGCAAAATTCAGAGCTGTTCAAAGATCTCTTCGTAGAGTTGAAGCGCTACTATGTGGTGGGAAATGTGAACCTGGAAGAAATGCTTAATGACTTCTGGGCTCGCCTTCTGGAGCGGATGTTCCGCCTGGTGAACTCCCAGTACCACTTTACAGATGAGTATCTGGAATGCGTGAGCAAGTATACCGAGCAGCTGAAGCCTTTCGGCGACGTCCCTCGGAAACTGAAGCTGCAGGTTACCCGCGCCTTTGTAGCAGCCCGTACTTTTGCTCAAGGCTTGGCTGTTGCAAGAGATGTAGTGAGCAAAGTCTCTGTGGTAAACCCCACAGCCCAGTGTACCCGCGCCTTGTTGAAGATGATCTACTGTTCCCACTGCCGGGGTCTCGTGACAGTGAAGCCATGTTACAACTACTGCTCCAACATCATGAGAGGCTGTTTGGCCAGCCAGGGGGATCTCGATTTCGAGTGGAACAATTTCATAGATGCCATGCTGATGGTGGCAGAGAGGCTAGAGGGTCCTTTCAACATTGAGTCGGTCATGGATCCCATCGATGTGAAGATTTCTGATGCGATTATGAATATGCAAGAGAACAGTGTGCAAGTCTCCCAGAAGGTTTTCCAGGGATGTGGCCCCCCGAAACCCTTCCCGGCTGGACGCATTTCCCGTTCCATCTCTGAAAGTGCATTCAGTGCTCGCTTCCGACCATACCATCCTGAGGAGCGCCCAACCACAGCAGCTGGCACGAGTTTGGACCGACTGGTTACTGATGTCAAGGAGAAGCTGAAACAGGCCAAGAAGTTCTGGTCCTCACTCCCTAGCAACGTTTGCAATGACGAAAGGATGGCTGCGGGGAATGGCAACGAGGATGACTGCTGGAATGGGAAGGGCAAGAGCAGGTACCTGTTTGCAGTAACAGGAAATGGATTAGCCAACCAGGGCAATAACCCTGAGGTCCAGGTTGACACTGACAAACCAGATATACTGATCCTTCGTCAAATCATGGCTCTTCGGGTTATGACCAGTAAAATGAAGAATGCTTATAATGGGAATGATGTGGACTTCTTTGATATCAGTGATGAAAGTAGTGGAGAAGGAAGCGGAAGTGGGTGTGAGTACCAGCAGTGCCCCTCGGAGTTCGAGTACAACGCCACTGACCACGCTGGGAAGAGTGCCAATGACAAAGCCGACAGTGCTGGCCCCCGTGCTGCTGCACAGCCCTACTTCCTTGCTGTCTTCTGCGTCTTGTTCCTGGTTATGCAGAGAGAGTGGAGCTAA

Related Sequences

XP_004860137.1 Protein

Gpc4 PREDICTED: glypican-4 [Heterocephalus glaber]

Length: 556 aa      View alignments
>XP_004860137.1
MARFGLPALLCTLAVVSAMLLAAELKSKSCSEVRRLYVAKGFNKNDAPLHQINGDHLKICPQGYTCCSEEMEEKYSLQSKDDFKNVVTEQCNHLQAVFASRYKKFDEFFKELLENAEKSLNDMFVKTYGRLYMQNSELFKDLFVELKRYYVVGNVNLEEMLNDFWARLLERMFRLVNSQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVVSKVSVVNPTAQCTRALLKMIYCSHCRGLVTVKPCYNYCSNIMRGCLASQGDLDFEWNNFIDAMLMVAERLEGPFNIESVMDPIDVKISDAIMNMQENSVQVSQKVFQGCGPPKPFPAGRISRSISESAFSARFRPYHPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSNVCNDERMAAGNGNEDDCWNGKGKSRYLFAVTGNGLANQGNNPEVQVDTDKPDILILRQIMALRVMTSKMKNAYNGNDVDFFDISDESSGEGSGSGCEYQQCPSEFEYNATDHAGKSANDKADSAGPRAAAQPYFLAVFCVLFLVMQREWS