Sequence details NCBI ID: XM_004860031.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Smarca1
Gene Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, transcript variant X5
Entrez Gene ID 101720942

Database interlinks

Part of NW_004624797.1 (Scaffold)

For more information consult the page for NW_004624797.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3147 bp    Location: 8710544..8628268   Strand: -
Raw sequence   
>XM_004860031.1
ATGGAGCCGGACACCGCCGCAGTGGCAGCCACCGTGGCAGCTGCCGACGCGACCGCCACAATCGTGGTCATAGAGGACGAGCAGCCGGGCCCGTCCACCTCTAAGGAGGAGGGAGCAGCCGCCGCGGCCACCGAAGCCACCGCGACCACGGAGAAGGGCGAGAAGAAGAAGGAGAAAAACATTTCTCCGTTTCAACTCAAACTTGCTACTAAAGCTTCTAAATCTGAAAAGGAAATGGACCCAGAATATGAAGAAAAAATGGTAAATACATACTCTTGGAAAGCAGATCGAGCAAAGAGATTTGAATTTTTACTGAAGCAGACAGAACTTTTTGCACATTTCATTCAACCTTCAGCGCAGAAATCTCCAACATTTCCTCTGAGCATGAAATTGGGACGTCCTCGAATAAAGAAAGATGAAAAGCAGAGCTTAATTTCTGCTGGAGACTATCGCCACCGACGCACGGAACAAGAAGAAGATGAAGAGCTACTGTTAGAGAGTCGAAAAACTTCGAGTGTGTGTGTTAGATTTGAGGTGTCCCCTTCTTATGTAAAAGGAGGAGCCCTGAGAGATTACCAGATTCGAGGACTGAACTGGTTGATCTCCTTGTATGAAAATGGAGTCAATGGTATTTTGGCTGATGAAATGGGTCTCGGCAAGACTTTGCAAACAATTGCTTTGCTTGGTTACCTGAAACACTACCGAAACATTCCTGGACCTCACATGGTTTTGGTTCCAAAGTCTACTTTACACAACTGGATGAATGAATTTAAACGATGGGTTCCATCTCTCCGTGTTATTTGTTTTGTTGGAGACAAAGATGCGAGAGCTGCTTTTATTTGTGATGAAATGATTCCAGGAGAGTGGGATGTCTGTGTTACTTCTTATGAGATGGTAATTAAAGAAAAATCTGTATTTAAAAAGTTTCATTGGCGATATGTAGTCATTGATGAAGCGCACAGAATTAAAAATGAAAAATCTAAGCTTTCAGAAATTGTTCGTGAGTTCAAGTCGACTAACCGCTTACTTCTAACTGGAACACCTTTGCAGAATAATCTCCATGAACTCTGGGCATTACTCAACTTTTTATTGCCTGATGTCTTTAATTCTTCAGATGACTTTGATTCATGGTTTGACACAAAAAATTGCTTTGGTGATCAGAAACTTGTGGAAAGACTTCATGCAGTTTTAAAACCATTTTTGTTACGTCGTATAAAAACTGATGTAGAGAGGAGTCTGCCTCCTAAAAAGGAGATAAAGATTTACTTGGGACTGAGTAAGATGCAACGAGAATGGTATACAAAAATCCTGATGAAAGATATTGATGTTTTAAACTCTGCTGGCAAGATGGACAAGATGCGACTCTTAAACATTCTCATGCAGCTTCGAAAGTGTTGTAATCATCCATATTTGTTTGATGGTGCTGAACCTGGTCCACCTTATACCACAGATGAGCATATTGTCAGCAACAGTGGCAAAATGGTGGTTTTGGATAAGCTATTGTCAAGACTCAAAGAACAGGGTTCAAGGGTTCTCATTTTCAGCCAGATGACTCGCTTGCTAGACATTTTGGAAGATTATTGTATGTGGCGTGGTTATGAGTATTGTCGGCTGGATGGACAAACCCCACATGAAGAAAGAGAGGAGGCAATAGAGGCCTTTAATGTTCCTAACAGTAGCAAATTCATCTTTATGCTGAGTACCAGGGCTGGAGGTCTTGGAATTAACTTAGCAAGTGCTGATGTGGTCATCCTGTATGATTCAGACTGGAATCCACAGGTTGATCTACAAGCTATGGATCGAGCACATCGTATTGGCCAGAAGAAGCCAGTACGTGTATTCCGTCTCATCACTGACGACACTGTTGAAGAAAGAATTGTAGAGAGAGCTGAGATAAAACTGAGACTTGATTCAATTGTTATACAACAAGGAAGACTCATTGATCAACAATCTAACAAGCTGGCAAAAGAGGAAATGTTACAAATGATACGTCATGGAGCCACCCATGTTTTTGCTTCTAAAGAAACTGAGCTGACAGATGAAGACATTACAACGATTCTGGAAAGAGGGGAAAAGAAGACTGCAGAGATGAATGAACGTTTGCATAAAATGGGAGAATCTTCTCTAAGAAATTTTAGAATGGACATTGAACAAAGTTTGTACAAGTTTGAAGGAGAGGATTATAGAGAAAAACAGAAGCTTGGTATGGTGGAATGGATTGAACCTCCTAAACGAGAACGCAAAGCAAACTACGCAGTGGATGCCTACTTTAGAGAGGCTTTGCGTGTCAGTGAGCCAAAGATTCCAAAGGCTCCACGTCCTCCAAAACAGCCAAATGTTCAGGATTTTCAATTTTTCCCACCACGTTTATTTGAGCTCCTGGAAAAGGAAATTCTGTATTATCGGAAGACAATAGGTTATAAGGTGCCAAGGAATCCTGAGATACCGAATCCAGCTCTGGTTCAAAGAGAAGAGCAAAAAAAGATTGATGGAGCCGAACCTCTTACATTAGAAGAGACAGAAGAAAAGGAAAAACTTCTCACACAAGGTTTCACAAACTGGACTAAGCGAGATTTTAACCAGTTTATTAAAGCTAATGAGAAGTATGGAAGAGATGACATTGATAATATTGCTAGAGAGGTAGAGGGCAAATCCCCTGAGGAGGTCATGGAATACTCAGCTGTATTTTGGGAACGTTGCAGTGAACTACAGGACATTGAGAAAATTATGGCTCAAATTGAACGTGGAGAAGCAAGAATTCAACGAAGGATCAGTATCAAGAAAGCCCTGGATGCCAAAATCGCAAGATACAAGGCTCCATTTCATCAGTTGCGTATTCAATATGGAACCAGCAAAGGAAAGAACTATACTGAGGAAGAAGATAGATTCTTGATTTGTATGTTACACAAAATGGGCTTTGATAGAGAAAATGTGTATGAAGAATTACGGCAGTGTGTACGGAATGCTCCCCAGTTTAGATTTGACTGGTTTATCAAGTCTAGAACTGCCATGGAATTCCAGAGACGCTGTAACACTTTAATTTCATTGATTGAGAAAGAAAATATGGAAATTGAGGAAAGAGAGAGAGCAGAAAAGAAGAAACGGGCAACTAAAACTCCAATGGTAAAATTTTCAGCATTTTCCTAA

Related Sequences

XP_004860088.1 Protein

Smarca1 PREDICTED: probable global transcription activator SNF2L1 isoform X5 [Heterocephalus glaber]

Length: 1048 aa      
>XP_004860088.1
MEPDTAAVAATVAAADATATIVVIEDEQPGPSTSKEEGAAAAATEATATTEKGEKKKEKNISPFQLKLATKASKSEKEMDPEYEEKMVNTYSWKADRAKRFEFLLKQTELFAHFIQPSAQKSPTFPLSMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLLESRKTSSVCVRFEVSPSYVKGGALRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFICDEMIPGEWDVCVTSYEMVIKEKSVFKKFHWRYVVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFDTKNCFGDQKLVERLHAVLKPFLLRRIKTDVERSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLSRLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDDTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKETELTDEDITTILERGEKKTAEMNERLHKMGESSLRNFRMDIEQSLYKFEGEDYREKQKLGMVEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPEIPNPALVQREEQKKIDGAEPLTLEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCSELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRATKTPMVKFSAFS