Sequence details NCBI ID: XM_004859962.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mrc1
Gene Name mannose receptor, C type 1, transcript variant X1
Entrez Gene ID 101717030

Database interlinks

Part of NW_004624796.1 (Scaffold)

For more information consult the page for NW_004624796.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000006215 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005606, Guinea pig)

Protein Percentage 90.87%
CDS Percentage 90.87%
Ka/Ks Ratio 0.16663 (Ka = 0.0475, Ks = 0.285)

Mrc1 ENSMUSG00000026712 (Mouse)

Gene Details

mannose receptor, C type 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028045, Mouse)

Protein Percentage 80.52%
CDS Percentage 81.19%
Ka/Ks Ratio 0.15043 (Ka = 0.1117, Ks = 0.7427)

Mrc1 ENSRNOG00000018251 (Rat)

Gene Details

mannose receptor, C type 1 (Mrc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024736, Rat)

Protein Percentage 81.49%
CDS Percentage 81.23%
Ka/Ks Ratio 0.14065 (Ka = 0.1067, Ks = 0.7589)

Genome Location

Sequence Coding sequence

Length: 4368 bp    Location: 10138257..10043359   Strand: -
Raw sequence   
>XM_004859962.1
ATGAGGCTGTTCCTACTCCTGGGTTTTGTCTCTGTCATTCCGGTCGTCGTGCAGCTGCTGGATACGAGGCAATTTTTAATCTATAATGAAGATCACAAGCGCTGTGTGGAAGCAGTCAGCCCCAGTGCAGTCCAAACTGCATCTTGCAACCTGGATGCCGAGTCACAGAAATTCCGATGGGTGTCCCAGTCCCAGCTCATGAGCGTTGCTTTTAAATTATGCCTGGGGGTGCCGTCCAAAAGCGATTGGGTTCCTGTCACCCTCTATCCCTGCAACTCCCAGAGTGAAATTCAGAAATGGGAATGCAAAAATGACACACTGTTGGGGATCAAGGGTGAAGATCTATATTTTAACTATGGCAATAAACAAGAAAAGAACATCATGTTGTACAAGGGATCTGGTTTATGGAGCAGGTGGAGGATATACGCAACCACAGATGATTTATGCTCCAGAGGTTATGAAGCCATGTACACGCTGCTGGGCAATGCCAATGGAGCCCCCTGTGCATTTCCATTCAAGTTTGAAAACAAGTGGTACGCAGACTGCACAAATGCTGGCCGGTCGGATGGATGGCTCTGGTGTGGGACCACCACAGACTACGACTCCAATAAGCTGTTTGGATTTTGTCCTACGAAATCTGAGGATAAATTATGGACTAAAGACCCACTGACTAGCATCCTTTACCAGATCAACTCCAAATCCGCGCTGACATGGCAACAGGCGAGGAAGAGCTGCCAACAGCAGGATGCTGAGCTCTTGAGCATCACTGAGATTCACGAGCAGACGTACCTGACAGGATTGACCAGTTCCTTGACTTCAGGACTCTGGATTGGACTCAACAGTCTGAGTTTCAACAGTGGTTGGCAGTGGAGTGGCAGCAGTCCGTTCCGGTACTTGAACTGGTTGCCAGGAAGTCCATCAGCTGAACCTGGAAAAAGCTGTGTGTCCCTCAATCCTGGAAAAAATGCTAAATGGGAAAACCTGGAATGTGTTCAGAAACTGGGTTATATTTGTAAGAAGGGCAACAGTACTTTGAATTCTTTTATAATTCCTTCAGAAACGGATGTGCCTAGTAGCTGTCCTAGTCAGTGGTGGCTGTATGCAGGACAATGTTACAAGATTCACAGAGAAGTGAAGAAAATCCAGAGAGACGCCCTGACTGCATGTCGGAAGGAGGGAGGGGACCTCGCCAGCATTCACACCATTGAGGAATTCGACTTCATCATCTCCCAGCTAGGATACGAGCCCAGTGATGAGCTGTGGATCGGCTTAAATGATATCAAGATTCAAATGTTCTTTGAATGGAGCGATGGGACCCCTGTAACATTTACCAAGTGGCTGCGCGGAGAACCCAGCCATGAGAACAACCGGCAGGAAGACTGTGTGGTAATGAAGGGCAAGGATGGGTTCTGGGCAGATAGGGCCTGTGAGGAGCCACTTGGTTACATCTGCAAGAAGAAAGCCCAAGCCCAAGCTCCGGGAACCGTGGAAAAAGAAGCAGGCTGCCGGAGAGGCTGGAAACGACATGGCTTCTACTGCTATTTGATTGGAAACACACTGTCCACATTTACAGAAGCAAACCAAACATGCAACAATGAGAAGGCTTATTTAGTAACTATTGAAGACAGATATGAACAAGCATTCCTGACTAGTTTGGTTGGATTGAGGCCTGAAAAATATTTTTGGACAGGACTTTCGGATGTACAGATCAAAGGGACCTTTCAGTGGACCGTGCAGGAGGAGGTCCAGTTCACACACTGGAATGCGGACATGCCAGGGCGAAAGGCAGGTTGCGTTGCCATGAAGACTGGGATTGCAGGGGGCTTATGGGATGTTCTGAAATGTGACCAAAGGGCAAAATTTGTGTGCAAGCACTGGGCAGAAGGAGTAACTCGCCCACCAGAGCCCACGACAACTCCTGAGCCCAAATGTCCAGAGGATTGGGGTACCACCAGTAAAACAAGCTCGTGTTTCAAGCTGTTTGCAAAAGGAAAACATGAGAAGAAAACATGGTTTGAATCTCGAGATTTTTGTAGAGCCCTGGGTGGAGAGCTAGCCACTATCAAGAGTAAAGAGGAACAGCAAACTATATGGAGATTAATAACGAGCACTGGAAGTTATCATGAGCTGTTCTGGTTGGGACTGACATATGGAGGTACTTCCGAAGGATTCGCCTGGACTGATGGTTCTCCGGTTTCCTATGAAAACTGGGCTTATGGCGAACCCAATAATTACAATAATGTTGAATACTGTGGTGAGATGAAAGGTGACCCTAATATGTCCTGGAATGACATTAACTGCGAGCACCTTAACAATTGGGTTTGTCAGATACAAAAAGGGAAAACACCAAATCCAGAGCCAACCCCAGCACCACAAGAAAATCCACCAGTCACTGAAGATGGGTGGGTTATTTATAAAGATTACCAATATTATTTTAGCAAACAGAAGGAAAACATGGACAATGCGCGAGCTTTTTGCAAGAGGAATTTTGGTGACCTTGTTACTGTTAAAAGTGAAAGTGAAAAGAAGTTTCTATGGAAATATGTAAACCGAAAGGGTGCCCCATCAATGTCAGCATATTTTATTGGTTTATTGATCAGCTTGGATAAAACGTTTATTTGGATGGATGGAAGCAAAGTGGATTATGTGTCTTGGGCCCCAGGTGAACCCAATTTTGCAAATGAGGATGAAAATTGTGTAACCTTGTATACAGATTCAGGCTTGTGGAATGACATTAACTGTGGTTATCCAAACCCCTTCATTTGCCAGAGGCACAATAGCAGCATTAATGCCACCGCTGTGCCCACCACACCCCCTACCCCAGGGGGCTGTAAGGAAGGTTGGAAGTTTTACAACAACAAGTGTTACAAAATCTTTGGATTTGTTGAAGAAGACAAAAAAAACTGGCAAGAGGCACGGAAAGCTTGTATAGGATTTAAAGGGAATCTGGCTTCCGTACTCAATGAAAAGGAGCAAGCATTCCTTGTCTCTCACATGAAGGAATCCACCTTCAATGCCTGGATTGGGCTGAACGATGTCAATTCAGAGCATAAGTTCCTTTGGACGGATGGACGAGGAGTTGATTATACCAACTGGGGGAAAGGTTTCCCTGGTGGAAGGAGAAGCAGCCTTTCTTATGAAGATGCCGACTGTGTGGTGATTGTGGGAGGGAAAATAAGGGACGCGGGGAAATGGATGGATGACGTCTGTGACAGCAAGAAAGGCTACGTATGCCAGACACTGCCAGATCCTTCCTTGCCTAATTCTCCAACAACAGCTCCAGCAGGTGGCTTTATTAAATATGGTGGAAGCAGCTATTCACTCATGAAAAATAAATTAACATGGGATGAAGCAGAGAAATATTGCAAGAGTTATACTTCCCTTATTGCTAGCATTCTGGATCCCTATACAAATGCATTTTTGTGGTTAAAAATGCAGCCATTTAATGTACCTGTGTGGATCGGCCTGAATAGTAACTTGACCAACAACGACTACACTTGGATCGATAAATGGAGGATGAGGTACAATAACTGGGCAGTGAATGAGCCCAGGGTGAAATCAGCATGTGTTTATCTGGATGTTGATGGTTTCTGGAAGACATCATATTGCAATGAAACTTTTTATTTTCTCTGCAAGAGATCAGATGAGATTCCAGCCACTGAACCGCCACAGCTGCCCGGCAGGTGTCCAGAGTCAGAGGTCAATGCGTGGATTCCTTTCCACGGTCACTGCTACTACATTGAATCTTCATTCACAAGGAACTGGGGTCAAGCTACCCTGGAATGCCTCCGCATGAATTCCTACCTGGTTTCCATTGAAAATGCTGCTGAATCCAGTTTTATTTCATACCTAGTTGAACCTCTTAGAAGTAAAACCAATTTTTGGATAGGATTGTTCAGAAATGTTGAAGGAAAGTGGTTCTGGATAAACAACAGTCCATTGTCCTTTGTCAACTGGAACTCGGGAGAACCCTCTACTGAGCGAAATGATTGTGTAGCTTTGACTGCCTCGACTGGGCTTTGGACTAATATTCATTGTTCTTCCTACAAAGGATTTATCTGTAAAAGACCAAAAATTATTGATCCTGAACCGACTCACACATTAATCACAACAAAAGCTGACTCCAGGAAGATGGAGCCTTCCAAAAAATCTTCCAGCACAGCAGGAGTGCTGGTTGTCGTGGTCCTCCTGATTGTAATGAGTGCTGGGCTCGCTGCCTATTACTTTTATAGGAAGAGACGGGCACAGCTACCTCCAGAAACCACCTTTGAAAATACTCTGTACTTTAACAGTCACTCAAGCCCAGGAACTAGTGATACAAAAGATCTCATGGGAAATATTGAACAGAATGAACATGCAGTTATCTAG

Related Sequences

XP_004860019.1 Protein

Mrc1 PREDICTED: macrophage mannose receptor 1 isoform X1 [Heterocephalus glaber]

Length: 1455 aa      
>XP_004860019.1
MRLFLLLGFVSVIPVVVQLLDTRQFLIYNEDHKRCVEAVSPSAVQTASCNLDAESQKFRWVSQSQLMSVAFKLCLGVPSKSDWVPVTLYPCNSQSEIQKWECKNDTLLGIKGEDLYFNYGNKQEKNIMLYKGSGLWSRWRIYATTDDLCSRGYEAMYTLLGNANGAPCAFPFKFENKWYADCTNAGRSDGWLWCGTTTDYDSNKLFGFCPTKSEDKLWTKDPLTSILYQINSKSALTWQQARKSCQQQDAELLSITEIHEQTYLTGLTSSLTSGLWIGLNSLSFNSGWQWSGSSPFRYLNWLPGSPSAEPGKSCVSLNPGKNAKWENLECVQKLGYICKKGNSTLNSFIIPSETDVPSSCPSQWWLYAGQCYKIHREVKKIQRDALTACRKEGGDLASIHTIEEFDFIISQLGYEPSDELWIGLNDIKIQMFFEWSDGTPVTFTKWLRGEPSHENNRQEDCVVMKGKDGFWADRACEEPLGYICKKKAQAQAPGTVEKEAGCRRGWKRHGFYCYLIGNTLSTFTEANQTCNNEKAYLVTIEDRYEQAFLTSLVGLRPEKYFWTGLSDVQIKGTFQWTVQEEVQFTHWNADMPGRKAGCVAMKTGIAGGLWDVLKCDQRAKFVCKHWAEGVTRPPEPTTTPEPKCPEDWGTTSKTSSCFKLFAKGKHEKKTWFESRDFCRALGGELATIKSKEEQQTIWRLITSTGSYHELFWLGLTYGGTSEGFAWTDGSPVSYENWAYGEPNNYNNVEYCGEMKGDPNMSWNDINCEHLNNWVCQIQKGKTPNPEPTPAPQENPPVTEDGWVIYKDYQYYFSKQKENMDNARAFCKRNFGDLVTVKSESEKKFLWKYVNRKGAPSMSAYFIGLLISLDKTFIWMDGSKVDYVSWAPGEPNFANEDENCVTLYTDSGLWNDINCGYPNPFICQRHNSSINATAVPTTPPTPGGCKEGWKFYNNKCYKIFGFVEEDKKNWQEARKACIGFKGNLASVLNEKEQAFLVSHMKESTFNAWIGLNDVNSEHKFLWTDGRGVDYTNWGKGFPGGRRSSLSYEDADCVVIVGGKIRDAGKWMDDVCDSKKGYVCQTLPDPSLPNSPTTAPAGGFIKYGGSSYSLMKNKLTWDEAEKYCKSYTSLIASILDPYTNAFLWLKMQPFNVPVWIGLNSNLTNNDYTWIDKWRMRYNNWAVNEPRVKSACVYLDVDGFWKTSYCNETFYFLCKRSDEIPATEPPQLPGRCPESEVNAWIPFHGHCYYIESSFTRNWGQATLECLRMNSYLVSIENAAESSFISYLVEPLRSKTNFWIGLFRNVEGKWFWINNSPLSFVNWNSGEPSTERNDCVALTASTGLWTNIHCSSYKGFICKRPKIIDPEPTHTLITTKADSRKMEPSKKSSSTAGVLVVVVLLIVMSAGLAAYYFYRKRRAQLPPETTFENTLYFNSHSSPGTSDTKDLMGNIEQNEHAVI