Sequence details NCBI ID: XM_004859961.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc39a12
Gene Name solute carrier family 39 (zinc transporter), member 12, transcript variant X2
Entrez Gene ID 101716204

Database interlinks

Part of NW_004624796.1 (Scaffold)

For more information consult the page for NW_004624796.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC39A12 ENSCPOG00000013668 (Guinea pig)

Gene Details

solute carrier family 39 (zinc transporter), member 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016375, Guinea pig)

Protein Percentage 86.19%
CDS Percentage 88.76%
Ka/Ks Ratio 0.35716 (Ka = 0.0843, Ks = 0.2359)

SLC39A12 ENSG00000148482 (Human)

Gene Details

solute carrier family 39 (zinc transporter), member 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000366586, Human)

Protein Percentage 81.13%
CDS Percentage 85.05%
Ka/Ks Ratio 0.3326 (Ka = 0.1144, Ks = 0.3439)

Slc39a12 ENSMUSG00000036949 (Mouse)

Gene Details

solute carrier family 39 (zinc transporter), member 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080911, Mouse)

Protein Percentage 74.05%
CDS Percentage 79.2%
Ka/Ks Ratio 0.29885 (Ka = 0.1635, Ks = 0.5471)

Slc39a12 ENSRNOG00000025639 (Rat)

Gene Details

solute carrier family 39 (zinc transporter), member 12 (Slc39a12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042204, Rat)

Protein Percentage 75.63%
CDS Percentage 79.72%
Ka/Ks Ratio 0.24888 (Ka = 0.1462, Ks = 0.5875)

Genome Location

Sequence Coding sequence

Length: 2196 bp    Location: 10008378..9941003   Strand: -
Raw sequence   
>XM_004859961.1
ATGTGGAAGGCCCCAGAGCTCCAGATAAATAATCATTTATCTTTCTTAAGAAATTCCTCTGCTTACCAGTTTATCCCACTAACTCATCCCTATCCGAGACAGACTCAAGGTGAAGGAAGAGTGGAGATGTCCCTCTGGACAAAGCTTTTGGTATATGGGGTGCCTTTGTTCCTTCTAGTCAGCTTTGTCCCCTGTACGGCCACAGACACACCTTCAAGCCAGGACAGCCTCGGCACCGAGAAGCAAGGCCAACTGGCAGAAATACTACGGATTCTCAGTGCTGATGACCACCCACCCCTCAACCACTCCAGGAGTCTCATCGCAACATTGTTGGAGAAGACTGGGTGCCCACGGACACACGGACTGCAAGGAGGTTGTCACCTGTGTTTTGAACCAGATGCACTGTTACTCATAGCCGGGGGAGATTTGGAAGAGCAGCTTCCAGAGGAGGTAGTCCAGAGAGTTTCTCTTCTCCTCCTCTATTACATTATTCATCAGGAAGAGATCTGTTCTTCAAAGCTCAACATGAGTAATAAAGACTATAAATTTTACCTGCACAGCCTACTGAGCCTCAGGCAGGATGAGGACTCCTACTTCCTTTCACAGAATGAGACAGAAGACATCTTGGCTCTCACCAGGCGGCACTTTGACACGTCCAGGAGCGAGTGTATGGAAACTAAAATGCTACAGAGGAAATCCGGAATCCTGAGCACTGATGGTGCTGATGAAAACACCCTTCCTCGGCTGGCAGCGACCATCATTGCTCTGTCCCTCCAAGGAGTTTGTTTGGGACAAAGAAACTCGCCTTCCTCAGACTATTTTACTGAATATATTTTCCGTTTGTTGAACAGTACAAATGCTCTCCACCTATCGGAACTGGAACAACTCTTCAATATTCTTTGGACCAAAAGTACCTGTAACAAAAAAGATGTAATCCATCAACCTCAAAGGAAACAAGGCCACATAAAGGTCCATGATTGGGGCTACCCTAACCTTTCTATATCTATGGACAAAGAGTCAGATGATGGTCCAAATTCCTGGGATCAGACTTGCTTCTCTGCTAGGCAGCTGGTGGAGATATTTTTACAGAATAGCCTTTCAGTCATTTCTAAGGAAGACTTCAAGCAAATCAGCCCGGGGATCATCCAGCAACTCCTGAGCTGCTCTTGCCAGCTGCCCATGGACCAACAAGCAAAGCATCTCCCTACCACACTACAGAAATACGGCTATGGTACAGCAGCTGTGGCGCTTCTCACGCTGGGCTCCATGCTCGGGAGCACGCTGGTCCTTTTCCACAGCTGTGAGGAGAACTACGACCTTGTTCTACAGCTCTTCATGGGCTTCGCTGTCGGGACGCTGTCAGGGGATGCTCTGCTACACCTTATTCCTCAGGTTCTTGGTTTACATAGGCAGGAAGCACCAGAGTTTGGACATTTCCATGAAAGCAAAGGTCATATTTGGAAACTGTTGGGATTGATTGGAGGCATTCATGGATTTTTCTTGATAGAAAAATGTTTTGCTCTTCTTGTATCACCAAATGCCAAGGGCCCGTCACTGGCCAATGGGCACGTGGGACATTCCCACCACCTTGCACTCAACCCTGAAGTAAGTGAACAGCCAGGCAGAGGCAAGTCTGCGTCCGCTATCCAGTTGAAAGGCCCAGAAGATTCACAGGCAGGTGAAATTTCTGTAGCCAGTATGACAACCTCCAACAGAAAATGCAAAGCCATTAGCTTATTAGCAGTAATGATACTGGTTGGGGACAGCCTGCATAATTTTGCAGACGGCCTAGTATTAGGAGCGGCCTTCTCATCATCATCTGAGTTGGGCGTGACCACAACAATTGCTATCTTGTGTCATGAAATTCCACATGAGATGGGAGACTTTGCCGTACTCTTAAGCTCTGGACTTTCTGTGAAGACTGCCATCCTGATGAACTTTATAAGTGCTCTCACTGCCTTCGCAGGGCTGTACATTGGCCTGTCGGTGTCTGCTGATCCATGCATCCAGGACTGGCTCTTAACGGTCACTGCGGGCATGTTTTTATACTTATCCTTGGTGGAAATGCTTCCTGAAATGACTCATGTTCAAACACGACGACCCTGGATGATGTTTCTTCTGCAAAACATTGGATTGATCCTAGGTTGGCTCTCTCTCTTACTCTTGGCTATATATGAACAAAATATTAAAATATAA

Related Sequences

XP_004860018.1 Protein

Slc39a12 PREDICTED: zinc transporter ZIP12 isoform X2 [Heterocephalus glaber]

Length: 731 aa      View alignments
>XP_004860018.1
MWKAPELQINNHLSFLRNSSAYQFIPLTHPYPRQTQGEGRVEMSLWTKLLVYGVPLFLLVSFVPCTATDTPSSQDSLGTEKQGQLAEILRILSADDHPPLNHSRSLIATLLEKTGCPRTHGLQGGCHLCFEPDALLLIAGGDLEEQLPEEVVQRVSLLLLYYIIHQEEICSSKLNMSNKDYKFYLHSLLSLRQDEDSYFLSQNETEDILALTRRHFDTSRSECMETKMLQRKSGILSTDGADENTLPRLAATIIALSLQGVCLGQRNSPSSDYFTEYIFRLLNSTNALHLSELEQLFNILWTKSTCNKKDVIHQPQRKQGHIKVHDWGYPNLSISMDKESDDGPNSWDQTCFSARQLVEIFLQNSLSVISKEDFKQISPGIIQQLLSCSCQLPMDQQAKHLPTTLQKYGYGTAAVALLTLGSMLGSTLVLFHSCEENYDLVLQLFMGFAVGTLSGDALLHLIPQVLGLHRQEAPEFGHFHESKGHIWKLLGLIGGIHGFFLIEKCFALLVSPNAKGPSLANGHVGHSHHLALNPEVSEQPGRGKSASAIQLKGPEDSQAGEISVASMTTSNRKCKAISLLAVMILVGDSLHNFADGLVLGAAFSSSSELGVTTTIAILCHEIPHEMGDFAVLLSSGLSVKTAILMNFISALTAFAGLYIGLSVSADPCIQDWLLTVTAGMFLYLSLVEMLPEMTHVQTRRPWMMFLLQNIGLILGWLSLLLLAIYEQNIKI