Sequence details NCBI ID: XM_004859926.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Bmi1
Gene Name BMI1 polycomb ring finger oncogene, transcript variant X2
Entrez Gene ID 101705973

Database interlinks

Part of NW_004624796.1 (Scaffold)

For more information consult the page for NW_004624796.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000015427 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013910, Guinea pig)

Protein Percentage 99.08%
CDS Percentage 97.85%
Ka/Ks Ratio 0.06807 (Ka = 0.0045, Ks = 0.0654)

Bmi1 ENSMUSG00000026739 (Mouse)

Gene Details

Bmi1 polycomb ring finger oncogene

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028071, Mouse)

Protein Percentage 97.53%
CDS Percentage 93.0%
Ka/Ks Ratio 0.03918 (Ka = 0.0114, Ks = 0.2914)

Bmi1 ENSRNOG00000016585 (Rat)

Gene Details

Bmi1 polycomb ring finger oncogene (Bmi1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059998, Rat)

Protein Percentage 94.75%
CDS Percentage 89.71%
Ka/Ks Ratio 0.06494 (Ka = 0.0275, Ks = 0.4241)

Genome Location

Sequence Coding sequence

Length: 981 bp    Location: 6282698..6277201   Strand: -
Raw sequence   
>XM_004859926.1
ATGCATCGAACAACCAGAATCAAGATCACTGAGCTAAATCCCCACCTAATGTGTGTGCTTTGTGGAGGGTACTTCATTGATGCCACAACCATAATAGAATGTCTACATTCCTTCTGTAAAACGTGTATTGTGCGTTACCTGGAGACCAGCAAGTACTGTCCTATCTGTGATGTCCAAGTTCACAAAACCAGACCGCTACTGAATATAAGGTCAGATAAAACACTTCAAGATATCGTATACAAATTAGTTCCAGGGCTTTTCAAAAATGAAATGAAGAGAAGAAGGGATTTTTATGCAGCTCATCCTTCAGCTGATGCTGCTAATGGCTCTAATGAAGATAGAGGAGAAGTTGCAGATGAAGAGAAGAGAATTATAACTGATGATGAGATAATAAGCTTATCCATTGAATTCTTTGACCAGAACAGATTGGATCGGAAAGTAAACAAAGATAAAGAAAAGTCTAAGGAGGAGGTGAATGATAAAAGGTATTTACGATGCCCAGCAGCAATGACTGTGATGCACTTAAGAAAGTTTCTCAGAAGTAAAATGGACATACCTACTACTTTCCAGATCGACGTCATGTATGAAGAAGAACCTTTAAAGGATTACTATACACTAATGGACATTGCCTACATTTATACCTGGAGAAGAAATGGCCCACTTCCTTTGAAGTACAGAGTTCGACCTACTTGTAAGAGAATGAAGATCAGTCACCAGAGAGATGGACTGACAAATGCTGGAGAACTGGAAAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGCAGGAGGTATTCCCTCCACCTCTTCTTGTTTGCCCAGCCCCAGTACTCCAGTGCAGTCTCCTCATCCACAGTTTCCTCACATTTCCAGCACCATGAATGGAACCAGCAGCAGCCCCAGCGGTAACCACCAATCTTCCTTTGCCAGTAGACCTCGAAAATCATCAGTAAATGGGTCGTCAGCAACGTCATCTGGTTGA

Related Sequences

XP_004859983.1 Protein

Bmi1 PREDICTED: COMM domain-containing protein 3-like isoform X2 [Heterocephalus glaber]

Length: 326 aa      
>XP_004859983.1
MHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEEKRIITDDEIISLSIEFFDQNRLDRKVNKDKEKSKEEVNDKRYLRCPAAMTVMHLRKFLRSKMDIPTTFQIDVMYEEEPLKDYYTLMDIAYIYTWRRNGPLPLKYRVRPTCKRMKISHQRDGLTNAGELESDSGSDKANSPAGGIPSTSSCLPSPSTPVQSPHPQFPHISSTMNGTSSSPSGNHQSSFASRPRKSSVNGSSATSSG