Details from NCBI annotation

Gene Symbol Ptf1a
Gene Name pancreas specific transcription factor, 1a
Entrez Gene ID 101703535

Database interlinks

Part of NW_004624796.1 (Scaffold)

For more information consult the page for NW_004624796.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTF1A ENSCPOG00000022828 (Guinea pig)

Gene Details

pancreas specific transcription factor, 1a

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016368, Guinea pig)

Protein Percentage 86.61%
CDS Percentage 88.69%
Ka/Ks Ratio 0.17743 (Ka = 0.0732, Ks = 0.4127)

PTF1A ENSG00000168267 (Human)

Gene Details

pancreas specific transcription factor, 1a

External Links

Gene Match (Ensembl Protein ID: ENSP00000365687, Human)

Protein Percentage 87.38%
CDS Percentage 88.26%
Ka/Ks Ratio 0.0827 (Ka = 0.0571, Ks = 0.6904)

Ptf1a ENSMUSG00000026735 (Mouse)

Gene Details

pancreas specific transcription factor, 1a

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028068, Mouse)

Protein Percentage 83.67%
CDS Percentage 81.89%
Ka/Ks Ratio 0.06205 (Ka = 0.0804, Ks = 1.2956)

Ptf1a ENSRNOG00000016902 (Rat)

Gene Details

pancreas specific transcription factor, 1a (Ptf1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022727, Rat)

Protein Percentage 83.0%
CDS Percentage 81.67%
Ka/Ks Ratio 0.06212 (Ka = 0.0836, Ks = 1.3452)

Genome Location

Sequence Coding sequence

Length: 906 bp    Location: 5550439..5549184   Strand: -
>XM_004859917.1
ATGGACGCGGTGCTGCTTGAGCACTTCCCCGGCGGCCTGGACGCCTTCCCGGCCGCGTACTTCGACGAGGACTTCTTCACCGACCAGTCCTCCAGGGACCCCTTGGAGGACTGCGACGAGCTGCCGGCGGACGAGCAGGCCGAGGTCGAGCTCCTCAGCCGCCAGCTGCGCGAGTGCTGCCACCGCGAAGGCGCGCGCCTGCTGCTGCCGCCCGCGGGCCCGGCCGCCCCGCACGCACTGGGCGCGCAGCAGCCTGGGGCCCCCGCGGAGCCGGGGGGCGGTGGCTTCCCCTTCTCACCCCGCTCGCCGCCCGCCTGCCGGGCCTGCCCCTGCGCCGCCGCGCTGTCCCCCGGGGCGCGGCTGCGGGGCCTGAGCGGGGCGGTGCGGCGGCGGCGGCGGGCGCGCTCGGAGGCGGAGCTGCTGCAGCTGCGGCAGGCGGCCAACGTGCGCGAGCGGCGGCGCATGCAGTCCATCAACGACGCCTTCGAGGGGCTGCGCTCGCACATCCCCACGCTGCCCTACGAGAAGCGCCTGTCCAAGGTGGACACACTGCGCCTGGCCATCGGCTACATCAACTTCCTCAGCGAGCTGGTGCAGGCGGACCTGCCCCTGCGCGGCGGCGGCGCGGACGGCGGGGGGCGCCTGGGCGGGGACAGCCCGGCCGGCCAGGCCCAGAAGGTCCTCATCTGCCACCGGGGCACGCGCTCCCCCTCCCCCAGCGACCCGGATTACGGCCTCCCTCCCCTCGCGGGCCACTCTCTCTCGTGGACTGACGAAAAGCAACTCAAAGAACAAAACGTCATCCGGACGGCCAAAGTGTGGACCCCAGAGGACCCCAGGAAACTCAACAGCAAGTCTTCTTTCAGCAACATAGAAAACGAGCCGCCCTTTGAGTGCGTGTCCTGA

Related Sequences

XP_004859974.1 Protein

Ptf1a PREDICTED: pancreas transcription factor 1 subunit alpha [Heterocephalus glaber]

Length: 301 aa      View alignments
>XP_004859974.1
MDAVLLEHFPGGLDAFPAAYFDEDFFTDQSSRDPLEDCDELPADEQAEVELLSRQLRECCHREGARLLLPPAGPAAPHALGAQQPGAPAEPGGGGFPFSPRSPPACRACPCAAALSPGARLRGLSGAVRRRRRARSEAELLQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADLPLRGGGADGGGRLGGDSPAGQAQKVLICHRGTRSPSPSDPDYGLPPLAGHSLSWTDEKQLKEQNVIRTAKVWTPEDPRKLNSKSSFSNIENEPPFECVS