Details from NCBI annotation

Gene Symbol Pdss1
Gene Name prenyl (decaprenyl) diphosphate synthase, subunit 1, transcript variant X2
Entrez Gene ID 101697310

Database interlinks

Part of NW_004624796.1 (Scaffold)

For more information consult the page for NW_004624796.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDSS1 ENSCPOG00000026219 (Guinea pig)

Gene Details

prenyl (decaprenyl) diphosphate synthase, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019814, Guinea pig)

Protein Percentage 88.48%
CDS Percentage 87.99%
Ka/Ks Ratio 0.20744 (Ka = 0.0692, Ks = 0.3335)

PDSS1 ENSG00000148459 (Human)

Gene Details

prenyl (decaprenyl) diphosphate synthase, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000365388, Human)

Protein Percentage 87.23%
CDS Percentage 86.18%
Ka/Ks Ratio 0.18594 (Ka = 0.076, Ks = 0.4087)

Pdss1 ENSMUSG00000026784 (Mouse)

Gene Details

prenyl (solanesyl) diphosphate synthase, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000055689, Mouse)

Protein Percentage 81.37%
CDS Percentage 83.91%
Ka/Ks Ratio 0.20451 (Ka = 0.0994, Ks = 0.4861)

Pdss1 ENSRNOG00000048849 (Rat)

Gene Details

Protein LOC100364990; RCG40823, isoform CRA_b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065114, Rat)

Protein Percentage 82.6%
CDS Percentage 84.15%
Ka/Ks Ratio 0.19373 (Ka = 0.094, Ks = 0.4852)

Genome Location

Sequence Coding sequence

Length: 1260 bp    Location: 2466029..2431648   Strand: -
>XM_004859906.1
ATGGCCGCGCGCTGGTGGCGGTGGTGGCGCGGCTGCTCCTGGAGGCCGGCGGCGCGGAGCCCCGGGCCCGGCTCCCCAGGCTGTGCGGGGCCGCCCGGGCCGCGCGCCGCTGCCGACGCTCGCGCGCAGGTGAGGCCGGCGGGCGGGCGGCGGTTAAGCCAAATGTCCTATTTTAATCTTGTGAAGAGCATAACATCTGCCTTTCGAAATGTGTACAGTATATCACGGTTTCATCACACGACACCAGGGGTGTGCTGTTGTAGTAAGACACAGAGTGATGAGAAATACAGCGATCCTTTTAAACTCGGCTGGAGAGACTTGAAAGGTCTATATGAAGATATTAAAAAGGAACTGCTCATATCTACAACGGAACTTAAGGAAATGTCTGAGTACCACTTCGATGGAAAGGGAAAAGCCTTTCGACCAGTTATTGTGGTGCTAATGGCCCGAGCATGTAACATTCATCATAACAACTCCCGAGACGTGCAAGCCGGCCAGCGCACTATAGCCTTAATTACAGAAATGATCCACACTGCTAGCCTGGTTCATGACGACATCATCGACGACGCCACCTCCCGAAGAGGAAAACGCACAGTTAATAAGATCTGGGGTGAGAAGAAGGCTGTTCTCGCTGGAGATTTAATTCTTTCTGCAGCATCTATAGCTCTGGCACGGATTGGAAACACTACTGTTATATCTATTTTAACCCAAGTAATTGAAGATTTGGTGCGTGGTGAATTTCTTCAGCTAGGATCAAAAGAAGATGAGAGTGGGCGATTTGCCCACTACCTTGAGAAGACCTTCAGGAAGACTGCAAGCCTGATAGCGCACAGTTGTAAAGCAGTCTCTGTCCTAGGGTGCCCTGACCCAGCAGTGCACGAGATTGCCTATCAGTATGGAAGGAATGTGGGGATAGCATTCCAGCTCGTGGATGATGTACTGGACTTCACCTCGTGTTCCGAAGAGATGGGCAAACCTACGTCCGCTGACCTGAAGCTCGGGTTAGCCACTGGCCCTGTCTTGTTCGCTTGTCGGCAGTTCCCAGAAATGAACGCTATGATAATGAGACGGTTCAGTTTGCCGGGAGACGTGGACAGAGCTCGACAATACGTATTACAGAGTGACGGTGTGCAGCAGACAACCTACCTCGCCCAGCAGTACTGCCACCAAGCAGTGAGGGAGATCAGTAAACTCCGGCCATCCCCAGAGAGGGACGCCCTCATTCAGCTTTCGGAAATCGTACTCACAAGACAGAAATGA

Related Sequences

XP_004859963.1 Protein

Pdss1 PREDICTED: decaprenyl-diphosphate synthase subunit 1 isoform X2 [Heterocephalus glaber]

Length: 419 aa      View alignments
>XP_004859963.1
MAARWWRWWRGCSWRPAARSPGPGSPGCAGPPGPRAAADARAQVRPAGGRRLSQMSYFNLVKSITSAFRNVYSISRFHHTTPGVCCCSKTQSDEKYSDPFKLGWRDLKGLYEDIKKELLISTTELKEMSEYHFDGKGKAFRPVIVVLMARACNIHHNNSRDVQAGQRTIALITEMIHTASLVHDDIIDDATSRRGKRTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKEDESGRFAHYLEKTFRKTASLIAHSCKAVSVLGCPDPAVHEIAYQYGRNVGIAFQLVDDVLDFTSCSEEMGKPTSADLKLGLATGPVLFACRQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHQAVREISKLRPSPERDALIQLSEIVLTRQK