Details from NCBI annotation

Gene Symbol Coil
Gene Name coilin, transcript variant X2
Entrez Gene ID 101710510

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COIL ENSCPOG00000001284 (Guinea pig)

Gene Details

coilin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001163, Guinea pig)

Protein Percentage 76.86%
CDS Percentage 83.1%
Ka/Ks Ratio 0.36687 (Ka = 0.1389, Ks = 0.3785)

COIL ENSG00000121058 (Human)

Gene Details

coilin

External Links

Gene Match (Ensembl Protein ID: ENSP00000240316, Human)

Protein Percentage 68.0%
CDS Percentage 78.32%
Ka/Ks Ratio 0.42774 (Ka = 0.2016, Ks = 0.4713)

Coil ENSMUSG00000033983 (Mouse)

Gene Details

coilin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103530, Mouse)

Protein Percentage 65.32%
CDS Percentage 73.06%
Ka/Ks Ratio 0.35 (Ka = 0.2485, Ks = 0.7101)

Coil ENSRNOG00000000244 (Rat)

Gene Details

coilin (Coil), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030534, Rat)

Protein Percentage 64.2%
CDS Percentage 73.13%
Ka/Ks Ratio 0.35841 (Ka = 0.2513, Ks = 0.7012)

Genome Location

Sequence Coding sequence

Length: 1740 bp    Location: 12006619..11994664   Strand: -
>XM_004859800.1
ATGGCAGCCTTCGAGATGGTTAGGCTACGGCTTCAATTTGACTACCCGCCGCCAATCACCCCACATTGTACGGTCTTCTGGCTTCTGGTGGACCTGAACAGATGCCGAGTTGTCACGGATCTCATTAGTCTCATCCGCCAGCGCTTCGGCTTCAGTTCTGGGGCCCTCCTAGGCCTCTACCTGGACGGGGGACTGTTGCCTCCCGCCGAGAGCGCGCGCCTGGTGAGAGACAACGATTGCCTCAGAGTCAAGTTAGAAGAGAGTGCAATTCCTGAGCTTTCTGTCCCAGTCAGCAGTGGTGGCGGCACTCATTTCTCACCTGTAAAAGCCAAGAAGCGGCCTTCTAAGTTGGAGGAAGATGAAGAAACCGAGCTAGGTTACATATTCTCAAAGAAGCACTGGAAGAGGCAAGAGAACAGCAGCAGTCAGGAGAAGGCCTCGCATCTGGACCCAAAAGCTGTGCCAGGCCAGCCCGTGAGGAAAAAAACCAAGCGAGAAAACAAAGTAACTTGTGACAGGGTGGATGTTGATGACAGAGAGGCCAGAAGGAAGTCACTGCAGAAGGAGAAACGTGAGTGTAAGAAACAGACCAAGAATCGCAGGTCTCCAAAAGCACAGGCAGTAAAAGAATGGAGCATCCCGAACTGTAGTCCCCTCAAAGGCTCTGCCGGATACGGCATTGGCAAAGCCAAAAGTAAAGTCGGGGGAGGAGTGTGTGCAAAGCACAGTTCCACGTCCTCCTCAGAGTCAGAGTCTTCTCATGAATCGAGCAGCGATCCTCTGGGCAAGGCCCCGCTGGAAGCTGCAAATTCCTTGGAGAAACTGTCAGCCGAGTTACCAAAGGGCAGGCCCTCTACGAAACACACAGCTGCAAACAAACCGCGCACAAAAGCCGCCTTGAACCTTGCCCCTGGCAAGGGCAAGACCACCAGGGCCTCGTCCTCGGCTAGTTCAGATTCCAGTTTGGATTCGGTTGATGAAAATGTGGCATCCAAGCGCTCGCCGGAGCGCGGGGTCATCTTCTTAAAGACAGCTGGCCTCTTGGCAGGAAGGGGTTGTCCGGGGCCCGGGCCCTCGCCACAGACTCCAGGCGCCACAGGATGGAAGCCTTCTGAGTCGAGTGACGGCACACAGGCTCCTGTTCCTCTGCCCAGCACGTCTGTCCCCACCAGCTTCGGCAGAGGATGGGGCCGAGGAGAGGACCTTCTTTCTTGGAAGGGGGTGAGGGGTCGGGGCATGCGGGGCAGAGGTCGAGGACGAGGGCACGCTCTGTCCTGTGTCTTAAATAAAAACCCTGAATGTCAGAAGCAGCAGCCCCTAAGCGAGACCGTGACAAACACATCCACTATCATTCAGAATCCAGTAGAGCTACCCAAGAAGGACTACAGTCTGTTACCACTGTTAGCAGCTGCCCCACAAGTTGGAGAAAAGATTGCATTTAAGCTTTTGGAACTAACATCTGATTATTCTCCTGATGTCTCTGACTACAAGGAAGGAAAACTATTAAGCCACAATCCAGAGACCCAGCAAGTAGATATAGAAATCCTGTCATCCTTACCTGCTGTGAAGGAACCTGGGAAATTTGACTTGGTTTATCACAGTGAAAATGGAACCGAGGTGGTGGAGTATGCTGTGATGCAGGAGAGGAGGATCACTGTTTTCTGGAGAGAGTTGATTGATCCAAGACTGATTATTGAACCTCCAAGTAACACCTCCAGTACTGAGCTTATCAGAGCATGA

Related Sequences

XP_004859857.1 Protein

Coil PREDICTED: coilin isoform X2 [Heterocephalus glaber]

Length: 579 aa      View alignments
>XP_004859857.1
MAAFEMVRLRLQFDYPPPITPHCTVFWLLVDLNRCRVVTDLISLIRQRFGFSSGALLGLYLDGGLLPPAESARLVRDNDCLRVKLEESAIPELSVPVSSGGGTHFSPVKAKKRPSKLEEDEETELGYIFSKKHWKRQENSSSQEKASHLDPKAVPGQPVRKKTKRENKVTCDRVDVDDREARRKSLQKEKRECKKQTKNRRSPKAQAVKEWSIPNCSPLKGSAGYGIGKAKSKVGGGVCAKHSSTSSSESESSHESSSDPLGKAPLEAANSLEKLSAELPKGRPSTKHTAANKPRTKAALNLAPGKGKTTRASSSASSDSSLDSVDENVASKRSPERGVIFLKTAGLLAGRGCPGPGPSPQTPGATGWKPSESSDGTQAPVPLPSTSVPTSFGRGWGRGEDLLSWKGVRGRGMRGRGRGRGHALSCVLNKNPECQKQQPLSETVTNTSTIIQNPVELPKKDYSLLPLLAAAPQVGEKIAFKLLELTSDYSPDVSDYKEGKLLSHNPETQQVDIEILSSLPAVKEPGKFDLVYHSENGTEVVEYAVMQERRITVFWRELIDPRLIIEPPSNTSSTELIRA