Details from NCBI annotation

Gene Symbol Pctp
Gene Name phosphatidylcholine transfer protein, transcript variant X1
Entrez Gene ID 101705722

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCTP ENSCPOG00000013507 (Guinea pig)

Gene Details

phosphatidylcholine transfer protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012162, Guinea pig)

Protein Percentage 81.13%
CDS Percentage 85.69%
Ka/Ks Ratio 0.42161 (Ka = 0.1277, Ks = 0.303)

PCTP ENSG00000141179 (Human)

Gene Details

phosphatidylcholine transfer protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000268896, Human)

Protein Percentage 76.78%
CDS Percentage 83.25%
Ka/Ks Ratio 0.36411 (Ka = 0.1468, Ks = 0.4031)

Pctp ENSMUSG00000020553 (Mouse)

Gene Details

phosphatidylcholine transfer protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020864, Mouse)

Protein Percentage 75.83%
CDS Percentage 79.3%
Ka/Ks Ratio 0.18229 (Ka = 0.1481, Ks = 0.8124)

Pctp ENSRNOG00000002425 (Rat)

Gene Details

phosphatidylcholine transfer protein (Pctp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003295, Rat)

Protein Percentage 72.99%
CDS Percentage 78.52%
Ka/Ks Ratio 0.26003 (Ka = 0.1773, Ks = 0.6818)

Genome Location

Sequence Coding sequence

Length: 684 bp    Location: 10973024..10998887   Strand: +
>XM_004859786.1
ATGGAGAGCTGCTTCTCGGAGGAGCAGTTCCGGGAGGTCTGCGCCGAGCTCCAGCAGCCGGCTCTGGCCGGGGCCGACTGGCAGCTGCTGGTGGAGACCTCGGGCGTCAGTATCTACCGGCTGCTGGACCAGCAGAGTGGACTTTATGAGTATAAAGTCTTTGGTATTTTAAAGGACTGCTCACCAGCTCTACTCGCAGATGTCTACATGGATTTAGACTACAGAAAACAGTGGGATCAGTATGTTAAAGAAATCTATGAAAAAGAATGCAATGGAGAGACCGTGACGTACTGGGAAATGAAGTACCCCTTCCCCATGTCCAACAGAGATTATGTCTACATCCGGCAGCGGCGAGACCTGAATGTAGAAGGGCGGAAGATCCACGTGGTCCTGGCCCAGAGCATCTCCCTGCCTCAGTTTCCTGAGAAGTCTGGTGTGATCCGAGTAAATCAGTACAAGCAGAGCCTGGGGATTGAGAGCGATGGCAAGGAGGGGAGCAAAGTTTTCATGTATCACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCACCAAGGTGAGATCTCGGGGCAGGAGAGGGGGAAGGGTATTCAAAAATGTTGACTTAGCCCGGCGAGGCTGTCAGGCTGAAGAGACACATTGTCCCAGGTGTAATGAGGCTCTTTTATGA

Related Sequences

XP_004859843.1 Protein

Pctp PREDICTED: phosphatidylcholine transfer protein isoform X1 [Heterocephalus glaber]

Length: 227 aa      View alignments
>XP_004859843.1
MESCFSEEQFREVCAELQQPALAGADWQLLVETSGVSIYRLLDQQSGLYEYKVFGILKDCSPALLADVYMDLDYRKQWDQYVKEIYEKECNGETVTYWEMKYPFPMSNRDYVYIRQRRDLNVEGRKIHVVLAQSISLPQFPEKSGVIRVNQYKQSLGIESDGKEGSKVFMYHFDNPGGQIPSWLINWATKVRSRGRRGGRVFKNVDLARRGCQAEETHCPRCNEALL