Details from NCBI annotation

Gene Symbol Tom1l1
Gene Name target of myb1 (chicken)-like 1, transcript variant X1
Entrez Gene ID 101700965

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TOM1L1 ENSCPOG00000023145 (Guinea pig)

Gene Details

target of myb1 (chicken)-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017230, Guinea pig)

Protein Percentage 85.5%
CDS Percentage 89.57%
Ka/Ks Ratio 0.35306 (Ka = 0.0787, Ks = 0.2228)

TOM1L1 ENSG00000141198 (Human)

Gene Details

target of myb1 (chicken)-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000460823, Human)

Protein Percentage 80.25%
CDS Percentage 86.69%
Ka/Ks Ratio 0.44877 (Ka = 0.1156, Ks = 0.2575)

Tom1l1 ENSMUSG00000020541 (Mouse)

Gene Details

target of myb1-like 1 (chicken)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103500, Mouse)

Protein Percentage 73.67%
CDS Percentage 80.42%
Ka/Ks Ratio 0.35389 (Ka = 0.1657, Ks = 0.4683)

Tom1l1 ENSRNOG00000002474 (Rat)

Gene Details

target of myb1 (chicken)-like 1 (Tom1l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003369, Rat)

Protein Percentage 75.74%
CDS Percentage 79.96%
Ka/Ks Ratio 0.26178 (Ka = 0.1501, Ks = 0.5733)

Genome Location

Sequence Coding sequence

Length: 1434 bp    Location: 10206098..10248731   Strand: +
>XM_004859770.1
ATGGCGTTTGGGAAGAGTCACCGGGACCCCTACACCACCTCCGTGGGCCACCTCATAGAAAAAGCTACATTTGCTGGTGCTCAGACTGAAGATTGGGGTCAGTTCATGCACATCTGCGACGTAATTAATGCTACTCAGGATGGGCCAAAAGATGCAGTGAAAGCTGTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATTCAACTTACTTTGTCACTTATTGATATGTGTATGCAGAACTGTGGTCCAAGCTTCCAGGCTCTGATTGTGAAGAAGGAATTCATTAAAGATGGTCTAGTTAAGCTGCTGAATCCCAGATACGCCTTGCCATTAGACGTTCAGAATAGAATCTTGAATTTCATTAAGACTTGGTCACAAGGTTTCCCAGGAGGTGTGGATGTCAGTGAAGTGAAGGAAGTGTACCTTGACCTGCTTAAGAAAGGTGTTCAGTTTCCTCCCCCAGGTGCAGAAGCTGAAGCAGCAAGACAGGAGACTCCTCAGACTCCATCAGGTTCACCAGCATCTGTCCCAACTGCACCAGCTCTTTCTCCTGTAACTGCTCCCAGGAACACAACTATTACATTGGTCCCAGAACAGATTGGAAAATTGCACAGTGAATTGGATATGGTGAAAATGAATGTGAGAGTGATGTCTGCCATACTGATGGAGAACTCTCCCGGGTCTGAAAACTCTGACGACCTAGAGCTTCTGCAGAAACTTTATAAGACGAGTCGGGAGATGCAGGAGAGGATCATGGACCTGCTTGTGGTGGTGGAGAATGAAGATGTAACCATTGAGCTAATTCAAGTGAATGAAGATTTGAACAATGCGATTCTTGGCTATGAGAGGTTTACTCGAAACCAACAAAGACTTTTGGAGCAAAATAAGAACCAGAATGGAGCTACCAATACCTCCAGGGAGCCTTCTGCTCCATCTTCTGATCTCCTTGAGCTAAGTCCTAGCCCCCTGATGCCTACAGCCACTCAGGGAGACTTCAACATCATGAATGCTCAGCTTTCAGACTTAGGTTTCAGCTCTCCAAGTCCTGTTGTAACAGACAACTCAAATTCCAGTCTTTATCCACATGTGGACTTGCTAGCCTTGGAAAATACAGAACTATCCCTGTTTTCCCAAAGGACCAGCCAAAACCTCGCTTCAAGTCAGATGTATGCTAATTTGCCACAGAACTCGAGTTCAGTGTTACTTCAGCCAGTTAGTCTGCAGAACGTCACAGCCACACCATCGAACCATGGGCCGCCATCCCCGCCTAACAATCAGCCAGTGATGACAAAGAATGATCTCCAGCCACCCAATTACTACGAGGTAATGGAGTTTGACCCCTTAGCTCCTGCTGCCACTACAGAAGCTATTTATGAAGAAATTGATGTTCATCTCCTCAAAGGAGCTCAAAGTAACAGTGACTGTTGA

Related Sequences

XP_004859827.1 Protein

Tom1l1 PREDICTED: TOM1-like protein 1 isoform X1 [Heterocephalus glaber]

Length: 477 aa      View alignments
>XP_004859827.1
MAFGKSHRDPYTTSVGHLIEKATFAGAQTEDWGQFMHICDVINATQDGPKDAVKAVKKRISKNYNHKEIQLTLSLIDMCMQNCGPSFQALIVKKEFIKDGLVKLLNPRYALPLDVQNRILNFIKTWSQGFPGGVDVSEVKEVYLDLLKKGVQFPPPGAEAEAARQETPQTPSGSPASVPTAPALSPVTAPRNTTITLVPEQIGKLHSELDMVKMNVRVMSAILMENSPGSENSDDLELLQKLYKTSREMQERIMDLLVVVENEDVTIELIQVNEDLNNAILGYERFTRNQQRLLEQNKNQNGATNTSREPSAPSSDLLELSPSPLMPTATQGDFNIMNAQLSDLGFSSPSPVVTDNSNSSLYPHVDLLALENTELSLFSQRTSQNLASSQMYANLPQNSSSVLLQPVSLQNVTATPSNHGPPSPPNNQPVMTKNDLQPPNYYEVMEFDPLAPAATTEAIYEEIDVHLLKGAQSNSDC