Sequence details NCBI ID: XM_004859757.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Utp18
Gene Name UTP18 small subunit (SSU) processome component homolog (yeast), transcript variant X2
Entrez Gene ID 101724606

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UTP18 ENSCPOG00000001477 (Guinea pig)

Gene Details

UTP18 small subunit (SSU) processome component homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001333, Guinea pig)

Protein Percentage 92.37%
CDS Percentage 91.62%
Ka/Ks Ratio 0.13858 (Ka = 0.0365, Ks = 0.2633)

UTP18 ENSG00000011260 (Human)

Gene Details

UTP18 small subunit (SSU) processome component homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000225298, Human)

Protein Percentage 87.77%
CDS Percentage 89.51%
Ka/Ks Ratio 0.22759 (Ka = 0.0648, Ks = 0.2845)

Utp18 ENSMUSG00000054079 (Mouse)

Gene Details

UTP18, small subunit (SSU) processome component, homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000068103, Mouse)

Protein Percentage 82.73%
CDS Percentage 85.15%
Ka/Ks Ratio 0.22298 (Ka = 0.0965, Ks = 0.4326)

Utp18 ENSRNOG00000002644 (Rat)

Gene Details

UTP18, small subunit (SSU) processome component, homolog (yeast) (Utp18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003582, Rat)

Protein Percentage 81.83%
CDS Percentage 84.77%
Ka/Ks Ratio 0.22904 (Ka = 0.0996, Ks = 0.435)

Genome Location

Sequence Coding sequence

Length: 1677 bp    Location: 6966076..6996931   Strand: +
Raw sequence   
>XM_004859757.1
ATGCCGCCCAAACGGAGGAGCCGAACGAAACCGGACCGGAGAGCTGGTGCGAGACCGGGCTTGAAGACCCAAATGAAGCCGGACCGGAGGTCCAGAGCGGGGACGGGCAGGCCGCCCCGAGAAGCTGCCCCTTCATCCCAGCGGATACCACCGGCCCGGCCGAACGCGGTGGCCGCTGCGCTCGCAGTGGCGGCGGCGACGGCAGAGGAGGAGACACGGCTCCGGCAGCGGCACCGCCTGACGCTGGAGGAGGACAAACCGGCCGTGGAGCGGTGTCTGGAGGAGCTGGTCTTCGGCGACGTCGAGGCCGACGAGGACGCGCTGCTGCAGCGGCTGCGGGTCGCGCGGGTTCAGTTACATGAAGACTCAGATGACTCAGAAGTGGAAAATGAAGCAAAAGATAATTTTTCCCCTCAAAAGAAGCCGGTTTGGGTGGATGAGGAAGATGAGGATGAGGAAATGGTTGACATGAAAAACAACCGGTTTCGGAAAGATCTGATGAAAAATGCCAGCGAAAGTAAGCTTTCAAAAGAGAAGCTTCAGGAGAGACTTAAAGAAGAATTCCAGCATGCCATGGGGGGAGTGCCTGCCTGGGCAGAGACGAGTAAGCGGAAAACATCTTCAGATGATGAAAGTGAAGAGGATGAAGATGATTTGTTGCAAAGGACTGGGAATTTCCTGTCCACATCAGCTTCTCTTCCACGAGGAATCTTGAAGATGAAGAACTGCCAGCATGCCAATGCTGAGCGACCGACCACTGCTCAGATCTCATCAGTCCAGTTCCATCCCTGTGCCCAGGTTGTGATGGTTGCTGGCTTAGATAATGCCTTTTCACTGTTTCAGGTTGATGGCAAAACAAATCCTAAAATCCAGAGCATCTATTTGGAAAGGTTTCCAATCTTTAAGGCTTGTTTTAGTGTTAATGGAGAACAGGTTTTAGCTACGAGCACTCACAGCAAGGTTCTTTACGTCTATGATATGCTAGCTGGGAAGTTAATTCCTGTGCATCAAGTGAGAGGTTTGAAAGAAAGAATAGTGAGGAGCTTTGAACTCTCCCCAGATGGGTCCTTCTTGCTTATCAACGGCATTGCTGGCTATTCTCATTTGCTGTCAATGAAGACCAAAGAGCTGATTGGAAGCATGAAGATTAATGGAAGGGTTTCAGCATCCACATTCACTTCGGATAGCAAGAAAATATACACCTATTCTGGGGATGGGGAAGTTTATGTTTGGGACGTGAACTCTAGGAAGTGCCTTAATAGATTTGTTGATGAAGGCAGTTTACGTGGATTAAGCATTGCTACATCAAGGAATGGACAGTATGTGGCGTGTGGTTCTGGTTGTGGAGTGGTAAATATATACAATCAAGATTCTTGTCTCCAAGAAACAAACCCAAAGCCAATAAAAGCTATAATGAACTTGGTTACTGGTGTTACATCTCTGGCCTTCAATCCTACTACAGAAATATTGGCAATTGCTTCAGAAACAATGAAAGAAGCAGTCAGATTGGTTCATCTTCCATCCTGTACAGTATTTTCTAACTTTCCAGTTGTGAAAAAGAAGAATATTTCTCATGTCCATTCCATGGATTTTTCTCCCAGAGGTGGCTACTTTGCTTTGGGTAATGAGAAGGGCAAGGCCCTGATGTATAGGTTGCACCATTACTCAGACTTCTAA

Related Sequences

XP_004859814.1 Protein

Utp18 PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog isoform X2 [Heterocephalus glaber]

Length: 558 aa      View alignments
>XP_004859814.1
MPPKRRSRTKPDRRAGARPGLKTQMKPDRRSRAGTGRPPREAAPSSQRIPPARPNAVAAALAVAAATAEEETRLRQRHRLTLEEDKPAVERCLEELVFGDVEADEDALLQRLRVARVQLHEDSDDSEVENEAKDNFSPQKKPVWVDEEDEDEEMVDMKNNRFRKDLMKNASESKLSKEKLQERLKEEFQHAMGGVPAWAETSKRKTSSDDESEEDEDDLLQRTGNFLSTSASLPRGILKMKNCQHANAERPTTAQISSVQFHPCAQVVMVAGLDNAFSLFQVDGKTNPKIQSIYLERFPIFKACFSVNGEQVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKERIVRSFELSPDGSFLLINGIAGYSHLLSMKTKELIGSMKINGRVSASTFTSDSKKIYTYSGDGEVYVWDVNSRKCLNRFVDEGSLRGLSIATSRNGQYVACGSGCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLAFNPTTEILAIASETMKEAVRLVHLPSCTVFSNFPVVKKKNISHVHSMDFSPRGGYFALGNEKGKALMYRLHHYSDF