Sequence details NCBI ID: XM_004859693.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Spata20
Gene Name spermatogenesis associated 20
Entrez Gene ID 101707160

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPATA20 ENSCPOG00000024264 (Guinea pig)

Gene Details

spermatogenesis associated 20

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016023, Guinea pig)

Protein Percentage 87.96%
CDS Percentage 88.13%
Ka/Ks Ratio 0.11191 (Ka = 0.0644, Ks = 0.5751)

SPATA20 ENSG00000006282 (Human)

Gene Details

spermatogenesis associated 20

External Links

Gene Match (Ensembl Protein ID: ENSP00000006658, Human)

Protein Percentage 85.91%
CDS Percentage 84.33%
Ka/Ks Ratio 0.09066 (Ka = 0.0781, Ks = 0.8617)

Spata20 ENSMUSG00000020867 (Mouse)

Gene Details

spermatogenesis associated 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042572, Mouse)

Protein Percentage 83.14%
CDS Percentage 80.65%
Ka/Ks Ratio 0.07638 (Ka = 0.0942, Ks = 1.2337)

Spata20 ENSRNOG00000003273 (Rat)

Gene Details

spermatogenesis associated 20 (Spata20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004377, Rat)

Protein Percentage 83.02%
CDS Percentage 79.89%
Ka/Ks Ratio 0.06988 (Ka = 0.0957, Ks = 1.3689)

Genome Location

Sequence Coding sequence

Length: 2571 bp    Location: 6430267..6438621   Strand: +
Raw sequence   
>XM_004859693.1
ATGAGCCGAGACTCTGAAATCGCAGGGCCCTACATCCCAAACTTTCCTGGTGTGAGTGGGCATCAGATTTTAGGCCCAGACCTGGGTCCTCTGAAGCCCGAGCCGTCTCCCGTGCAGTTCCGCACTCGGCCGCTGGGCAGCGCTCAGAGACTAGCCACACAGTCCGGCCCGGCACCCTCGGTCCACCGCCTCCGAGAAGCCATGCTAGTCTCGCGGGCCTGGCTGGGCTCCGGCCTCCTGCAGCCCCACGCCCGGCTGGGCAGAGCCGTGAGCCGCAGGGGCAGCTCCTCCCGGGACAAGGATCGCAGCGCCTCGGTCAGCAGCTCTGAGACCATGCCTGCCGGAGGGAAGGGAAGCCGGACCAGTGGTGCCACCAACACAGCCCAGAAGGTCCCCAACCGCCTGATCGATGAGAAGTCCCCGTACCTCCTGCAGCATGCCTACAACCCTGTGGACTGGTACCCCTGGGGACAAGAAGCCTTTGGCAAGGCCAGGAAAGAAAACAAGCCAATCTTCCTCTCAGTGGGGTACTCCACCTGCCACTGGTGCCACATGATGGAGGAGGAGACCTTCCAGAACGAGGAGATCGGCCGCCTGCTCAGTGAGGACTTTGTGAGCGTGAAGGTGGACCGCGAGGAGCAGCCGGATGTGGACAAGGTGTACATGACCTTCGTGCAGGCCACCAGCAGTGGTGGGGGCTGGCCCATGAACGTTTGGCTCACCCCCAGCCTTCAGCCCTTTGTGGGGGGCACCTACTTCCCCCCCGAGGATGGCCTGACCCGCGTGGGCTTCCGAACAGTGTTGCTGAGAATCCGGGACCAGTGGAAGCAAAACAAGAGCACCCTGCTAGAGAGCAGCCAGCGTGTCACCACGGCCCTGCTGGCCCGCTCAGAGATCAGCATGGGTGACCGCCAGGCGCCACCCTTGGCCGCCACCATGAATAGCCGCTGCTTCCAGCAGTTGGACGAGGGCTATGACGAGGAATACGGCGGCTTCGCAGAGGCCCCCAAGTTCCCCATCCCAGTGATCCTGAGCTTCCTGTTCTCCTACTGGCTTGGTCACCGGCTGACCCAGGATGGCTCTCGGGCCCAGCAGATGGCCTTGCACACCCTGAAAATGATGGCCAACGGGGGCATCCGGGACCACGTGGGGCAGGGCTTTCACCGCTACTCCACCGACCGCCAGTGGCAGGTCCCCCACTTTGAGAAGATGCTCTATGACCAGGCGCAGCTTGCCGTGTCCTACTCACAGGCTTTCCAGATCTCCGGAGATGAATTCTACTCTGACATCGCCAAAGGCATCCTGCAGTACGTGGACCGGAGTCTGAGCCATCGGTCTGGTGGCTTCTACAGCGCAGAGGACTCAGACTCAGCCCCGGAGCGGGGCATGCAGCCCAGGGAGGGCGCCTTCTACATGTGGACTGTCAGGGAGCTCCAGTGCCTCCTCCCGGAGCCTGTGGTGGGTGCCTCAGAGCCGCTGACTGTGGGCCAGCTCCTCACCAAGCACTATGGGCTCACGGAGGCCGGCAACGTCAGCCTCTGTCAGGACCCCAAGGGGGAGCTGCAGGGCCAGAATGTGCTGACCGTCCGCTACTCGCTGGAGCTGACTGCTGCCCGCTTCGGCCTGGATGTGGAGGCGGTGCGGGGCCTGCTCACTTCGGGGCTGGACAAGCTCTTCCAGGTGCGGAAGCAGCGGCCAAAGCCACACCTGGACAGCAAGATGCTGACTGCTTGGAATGGACTGATGGTTTCTGGCTACGCCGTGACAGGGGCTGTCCTGGGCATAGAGAGGCTGGTCAACCGCGCCACCAACGGTGCCAAGTTCCTCAAAAGGCACATGTTTGACGTGGCCACCGGGCGCCTGAAGCGGACCTGCTACGCCGGCACCGGGGCCTCCGTGGAGCACAGCACCCCGCCCCGCTGGGGCTTCCTGGAGGACTATGCCTTCGTGGTGCGCGGACTGCTGGACCTGTACGAGGCCTCGCAGGAGAGCGCATGGCTGGAGTGGGCCCTGAGGCTGCAGGACACGCAGGACAGGCTCTTCTGGGACTCCCGGGGCGGAGGCTACTTCTGCAGCGAGGCCGAGCTAGGGCCCGGCCTGCCCCTGCGGGTGAAGGACGACCAGGATGGCGCGGAGCCCAGCGCCAACTCGGTGGCAGCCCACAACCTGCTGCGGCTGCACGGCTTCACGCGCCACAAGGACTGGCTGGACAAGTGCGTGTGCCTGCTCACCGCCTTCTCCGAGCGCATGCGCCGCGTCCCCGTGGCTCTGCCCGAGATGGTCCGCACCCTCTCTACCCACCAGCAGGGCCTCAAGCAGATTGTGATCTGCGGAGATGCCCAGGCCAAGGACACCAAGGCTCTGCTTCAGTGCGTGCACTCCCTCTACATCCCCAACAAGGTGCTGATTCTGGCTGACGGGGGCCCCTCGAGCTTCCTGTCCCGCCAGCTGCCCTTCCTGAGCACGCTGCGACGGCTGGAAGACCGGGCCACTGCTTATGTGTGTGAGAACCAGGCCTGCTCCATGCCCATCACCGAGCCCTGTGAGCTACGGAAACTGCTCCTGCAGTGA

Related Sequences

XP_004859750.1 Protein

Spata20 PREDICTED: spermatogenesis-associated protein 20 [Heterocephalus glaber]

Length: 856 aa      View alignments
>XP_004859750.1
MSRDSEIAGPYIPNFPGVSGHQILGPDLGPLKPEPSPVQFRTRPLGSAQRLATQSGPAPSVHRLREAMLVSRAWLGSGLLQPHARLGRAVSRRGSSSRDKDRSASVSSSETMPAGGKGSRTSGATNTAQKVPNRLIDEKSPYLLQHAYNPVDWYPWGQEAFGKARKENKPIFLSVGYSTCHWCHMMEEETFQNEEIGRLLSEDFVSVKVDREEQPDVDKVYMTFVQATSSGGGWPMNVWLTPSLQPFVGGTYFPPEDGLTRVGFRTVLLRIRDQWKQNKSTLLESSQRVTTALLARSEISMGDRQAPPLAATMNSRCFQQLDEGYDEEYGGFAEAPKFPIPVILSFLFSYWLGHRLTQDGSRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWQVPHFEKMLYDQAQLAVSYSQAFQISGDEFYSDIAKGILQYVDRSLSHRSGGFYSAEDSDSAPERGMQPREGAFYMWTVRELQCLLPEPVVGASEPLTVGQLLTKHYGLTEAGNVSLCQDPKGELQGQNVLTVRYSLELTAARFGLDVEAVRGLLTSGLDKLFQVRKQRPKPHLDSKMLTAWNGLMVSGYAVTGAVLGIERLVNRATNGAKFLKRHMFDVATGRLKRTCYAGTGASVEHSTPPRWGFLEDYAFVVRGLLDLYEASQESAWLEWALRLQDTQDRLFWDSRGGGYFCSEAELGPGLPLRVKDDQDGAEPSANSVAAHNLLRLHGFTRHKDWLDKCVCLLTAFSERMRRVPVALPEMVRTLSTHQQGLKQIVICGDAQAKDTKALLQCVHSLYIPNKVLILADGGPSSFLSRQLPFLSTLRRLEDRATAYVCENQACSMPITEPCELRKLLLQ