Details from NCBI annotation

Gene Symbol Sgca
Gene Name sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
Entrez Gene ID 101702821

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGCA ENSCPOG00000021689 (Guinea pig)

Gene Details

sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015895, Guinea pig)

Protein Percentage 88.37%
CDS Percentage 88.46%
Ka/Ks Ratio 0.12828 (Ka = 0.0599, Ks = 0.4667)

SGCA ENSG00000108823 (Human)

Gene Details

sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)

External Links

Gene Match (Ensembl Protein ID: ENSP00000262018, Human)

Protein Percentage 86.56%
CDS Percentage 86.65%
Ka/Ks Ratio 0.14909 (Ka = 0.074, Ks = 0.4964)

Sgca ENSMUSG00000001508 (Mouse)

Gene Details

sarcoglycan, alpha (dystrophin-associated glycoprotein)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099451, Mouse)

Protein Percentage 85.01%
CDS Percentage 81.31%
Ka/Ks Ratio 0.10609 (Ka = 0.0891, Ks = 0.8402)

Sgca ENSRNOG00000003998 (Rat)

Gene Details

sarcoglycan, alpha (dystrophin-associated glycoprotein) (Sgca), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005381, Rat)

Protein Percentage 85.01%
CDS Percentage 81.83%
Ka/Ks Ratio 0.10619 (Ka = 0.0869, Ks = 0.8179)

Genome Location

Sequence Coding sequence

Length: 1164 bp    Location: 6152323..6161359   Strand: +
>XM_004859681.1
ATGGCAGCCGTGATCCTCTGGATTCCTCTCCTTGTGGGTCTCTCGGTAGGGCTGGGGGGCACCCAGGCCCAGCAGAACCCCCTCCACCCACTTGTGGGCCGTGTCTTTGTGCACACCTTGGACCACGCGACCTTCTTGCGGCTCCCCGAGGACACTGCTGTCCAGCCCTCTACACGCATCACCTACCACGCCCACCTCCAGGGACACCCGGACCTGCCCCGGTGGCTCCGATACACCCAGCGCAGCCCCACCCAGCCTGGCTTCCTCTATGGCACGGCCACCTCGGAAGATCGCGGGCGCCAGGTCATCGAGGTCACAGCCTACAATCGGGACACCTTCGCCACCACTCAGAAGAGGCTGGTGCTGTTGATTGGGGACCCTGAAGGCCCCCGGCTGCCGTACCAAGCCGAGTTCCTGGTGCGAAGCCACGACGTGGAGGAGGTGCTGCCCTCCACGCCCACTAGCCGCTTCCTCACGGGCCTGGGGGGCCTCTGGGAGCCCGGGGAGCTTCAGGTGCTCAACGTCACTTCCGCCTTGGACTGTGGTGGCCGTGTCCCTCTTCCCATCGAGGGCCGCAAGGAAGGGGTATACATCAAAGTGGGCTCTGCCACGCCCTTTTCCACCTGCCTGAAGATGGTGGCGTCCCCTGACAGCCACGCCCGCTGTGCCCAGGGCCAGCCCCCGCTCCTGTCCTGCTACGACACCTTGGCACCCCACTTCCGCGTTGACTGGTGCAACGTGTCCCTGGTGGATAAGTCAGTGCCGGCACCTGCAGACGAGGTGCCTACCATTGGGGATGGCATCCTGGAGTATGATCCATTCTTCTGCCCTCCGACCGAGGCCACAGCCCGAGACTTCCTCGAAGACGCCCTGGTCACCCTCCTGGTGCCTCTGCTGGTGGCTCTGCTGCTTACCCTGCTGCTGGCCTATGTCATGTGCTGTCGGCGAGAGGGACGGCTGAAGAGAGATCTGGCCACCTCTGACATCCAGATGGTCCACCACAGCACCATTCTCCAGAACACGGAGGAGCTGCGGCAGATGGCGGCCACCCGCGAGGTGCCCCGGCCTCTCTCCACCCTGCCCATGTTCAATGTGCGCACAGGCGAGGGGCTGCCACCCCGTGTGGACAGCGCCCAGGTGCCCCTCATCCTGGACCAGCCCTGA

Related Sequences

XP_004859738.1 Protein

Sgca PREDICTED: alpha-sarcoglycan [Heterocephalus glaber]

Length: 387 aa      View alignments
>XP_004859738.1
MAAVILWIPLLVGLSVGLGGTQAQQNPLHPLVGRVFVHTLDHATFLRLPEDTAVQPSTRITYHAHLQGHPDLPRWLRYTQRSPTQPGFLYGTATSEDRGRQVIEVTAYNRDTFATTQKRLVLLIGDPEGPRLPYQAEFLVRSHDVEEVLPSTPTSRFLTGLGGLWEPGELQVLNVTSALDCGGRVPLPIEGRKEGVYIKVGSATPFSTCLKMVASPDSHARCAQGQPPLLSCYDTLAPHFRVDWCNVSLVDKSVPAPADEVPTIGDGILEYDPFFCPPTEATARDFLEDALVTLLVPLLVALLLTLLLAYVMCCRREGRLKRDLATSDIQMVHHSTILQNTEELRQMAATREVPRPLSTLPMFNVRTGEGLPPRVDSAQVPLILDQP