Details from NCBI annotation

Gene Symbol Itga3
Gene Name integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor), transcript variant X1
Entrez Gene ID 101699399

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ITGA3 ENSCPOG00000003582 (Guinea pig)

Gene Details

integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003234, Guinea pig)

Protein Percentage 90.97%
CDS Percentage 91.31%
Ka/Ks Ratio 0.12664 (Ka = 0.0417, Ks = 0.329)

ITGA3 ENSG00000005884 (Human)

Gene Details

integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)

External Links

Gene Match (Ensembl Protein ID: ENSP00000007722, Human)

Protein Percentage 88.43%
CDS Percentage 88.46%
Ka/Ks Ratio 0.12433 (Ka = 0.0581, Ks = 0.4669)

Itga3 ENSMUSG00000001507 (Mouse)

Gene Details

integrin alpha 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001548, Mouse)

Protein Percentage 85.11%
CDS Percentage 83.94%
Ka/Ks Ratio 0.11949 (Ka = 0.0834, Ks = 0.6981)

Itga3 ENSRNOG00000004276 (Rat)

Gene Details

Integrin alpha 3 variant A; Protein Itga3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034608, Rat)

Protein Percentage 86.64%
CDS Percentage 85.04%
Ka/Ks Ratio 0.09999 (Ka = 0.0686, Ks = 0.6865)

Genome Location

Sequence Coding sequence

Length: 3192 bp    Location: 6062291..6092557   Strand: +
>XM_004859670.1
ATGGGGCCCGGTCCCCGCCGCGCGCCCTGTGCCCGGCGCCCGGTGCTCTGCGCCCTCGCCTTGATGGTGGCGGCCGGCAGCCGCGTCGCCTCAGCCTTCAACCTGGACACCCGATTCCTGGTGGTGAAGGAGGCCGAGAATCGGGGGAGCCTTTTCGGCTACTCGGTCGCCCTCCACCAGCAGACGGAGCGGCAGCAGCGCTACCTGCTCCTGGCCGGTGCCCCCCAGGACCTCGCCATGCATGATGGCTACACCAACCGGACTGGTGCTGTGTACCTGTGCCCCCTCTCTGCCCTCAAGTACGACTGTGAGCGGATGGACATCATGGAGAAAAGTGACCCTAACCATCACATTATAGAGGACATGTGGCTTGGGGTGACTGTGGCCAGCCAGGGGCCTGCAGGCAGAGTCCTGGTCTGTGCCCACCGCTACACCGAGGTGCTGTGGTCAGGATCGGAGGATCAGCGGCGCATGGTGGGCAAGTGCTACGTGCGGGGCAATGACCTGGAGCTGGACCACAGTGACGACTGGCAGACCTATCACAACGACATGTGCAACAGCAACACTGACTACCTGGAGACGGGCATGTGCCAGCTGGGCACCAGCGGTGGCTTCTCCCAGAACACAGTGTACTTCGGCGCCCCTGGTGCTTACAACTGGAAAGGAAACACCTACATGATTCAGCGGAAGGACTGGGATTTATCTGAGTATAGTTACAAGGAGCCAGAGGACGAAGGAAACCTCTATATTGGATACTCAGTGCAGTTAGGCAAAGCCGTCCTGCACCCCTCAGACATCACCATTGTGACCGGAGCCCCTCGGCACCAGCACACAGGCGCCGTCTTCCTGTTGAGCCAGGAGGCGGGCGGAGACCTGCGGAAGAGGCAGGTGCTGGTGGGTGCACAGGTGGGCGCTTATTTTGGCAGTGCCATTGCCCTGGCGGACCTGAACAATGATGGGTGGCAGGACCTCCTGGTGGGCGCTCCCTACTACTTTGAGCGCAAAGAGGAGGTAGGGGGTACCGTCTACGTCTTCATGAACCAGGCAGGCACCTCCTTCCCGGCTGAGCCCTCCCTCCTCCTCCACGGCCCGAGTCGCTCTGCCTTCGGCTTGTCTGTGGCCAGCATTGGTGACATCAACCAGGATGGATTCCAGGACATTGCTGTGGGCGCCCCATTCGAGGGCCTGGGCAAAGTGTACATCTACCACAGCAGTTCCGGCGGGCTCCTCAGACAGCCCCAACAGGTAATCAGCGGAGAGAATCTGGGACTGCCTGGCTTGGCCAGCTTCGGCTACTCTCTGAGTGGGCAGGTGGACGTGGATGACAACCTCTACCCAGACCTGCTGGTAGGGAGCCTGTCGGACCACATCGTGCTGCTTCGGGCCCGGCCCGTCATCAACATCCTCCACAGGACTTTGGTGGCCAGGCCAGCTGTCCTGGACCCGGCACATTGCACGGACACCTCCTGTGTGCAGGTGGAGCTATGCTTCGCTTACAACCAGAGCGCCGGGAACCCCAACTACAGGCGCAACATCACCCTGGCCTACACTCTGGAAGCTGATCGGGACCGCCGCCCGCCCCGGCTCCGCTTTGCCCGCAGCCAGTCAGCCGTCTTCCACGGCTTCTTCTCCATGCCCGAGATGCGCTGCCAGACACTGGAGCTGCTCCTGATGGATAACCTCCGCGACAAACTGCGTCCCATTGTCATCTCCATGAACTACTCATTACCTCTGCGGATGCCCGAGCGCCCTCGGCTGGGGCTTCGGTCCCTGGACGCCTACCCGGTCCTCAACCAGGCACAAGCTATGGAGAACCGCACAGAGGTCCAGTTCCAGAAGGAGTGCGGGCCGGACAACAAGTGTGAGAGCAACTTGAAGATGCGGGGGGCCTTTGTGTCTGAGCAGCTGCAGCGGCTGAGCAGGCTCCAGTACAGCAGAGATGTCCGGAAATTGCTCCTGAGCATCAACGTGACCAACACCCCAAGCCCAGAGCGAGCTGGGGAAGATGCCCACGAGGCGCTGCTCACCCTGGAGGTGCCACCCGCCCTGCTGCTGTCCTCTGTGCGCCCTCCTGGAGCTTGCCAAGCTAATGAGACCATCCTGTGCGAACTGGGTAACCCCTTCAAGCGGAACCAGAAGATGGAGCTGCTCATCGCCTTTGAGGTCGGCGGGGTGACTTTGCACACGAGGGACATTCAGGTGCAGCTGGAGCTTTCCACGTCGAGTCACCAGGACAACCTGCGGCCCGTGACCCTGACACTGCAGGTGGACTACACGCTCCAGGCCTCGCTCAGCATGGTGAATCACCGGCTGCAAAGCTTCTTTGGTGGCACCGTGATGGGTGAGTCGGGCATGAAAACTGTGGAGGACGTGGGAAGTCCCCTCAAATACGAATTCCAGGTGAGCCCTGTGGGGGAGGGGCTGGCAGCCCTGGGGACCCTGGTGCTGGGTCTGGAATGGCCCTATGAAGTCGCCAATGGCAAGTGGCTGCTGTACCCCACGGAGATCACCATTCATGGCAATGGGTCCTGGCCCTGCCAGCCTGCTGGAGACCTGGTCAACCCTCTTAACCTCACTCTCTCTGACCCGAAGAACAGGCCACAGCGCAGGCGGAGAGAGCTAGACCCTGGAGGAGACCAGGGCCCCCCTCCCATCACTCTGGCTGCGGCCAAGAAAGCCAAGTCTGAGACTGCACTGAACTGTGCCACTGGCCGTGCCCGCTGTGTATGGCTGGAGTGCCCCCTTCCTGATGCCACCTTCACCACCAACGTGACCGTGAGGGCTCGCGTGTGGAACAGCACGTTCATTGAGGATTACAGAGACTTTGACCGAGTCAAGGTAGATGGCTGGGCCACTCTCTTCCTGCGAACCAGTGTCCCCTCCCTCAACATGGAGAACAAGACCACATTGTTCTCTGTGGACATCGACTCAGAGCTGGTGGAGGAGCTGCCGGCCGAGATCGAGCTGTGGCTGGTGCTGGTGTCCGTGGGCTCGGGGCTGCTGCTGTTGGGACTGATCATCCTCTTGCTGTGGAAGTGTAACTTCTTTAAGCGGACCCGCTACTACCGGATCATGCCCAAGTACCACGCGGTGCGCATCCGGGAAGAGGAGCGCTACCCGCCTCCAGGGGGCGCTGTGCCCACCAAGAAACACTGGGTCACCAGCTGGCAGACCCGGGACCGATACTACTGA

Related Sequences

XP_004859727.1 Protein

Itga3 PREDICTED: integrin alpha-3 isoform X1 [Heterocephalus glaber]

Length: 1063 aa      View alignments
>XP_004859727.1
MGPGPRRAPCARRPVLCALALMVAAGSRVASAFNLDTRFLVVKEAENRGSLFGYSVALHQQTERQQRYLLLAGAPQDLAMHDGYTNRTGAVYLCPLSALKYDCERMDIMEKSDPNHHIIEDMWLGVTVASQGPAGRVLVCAHRYTEVLWSGSEDQRRMVGKCYVRGNDLELDHSDDWQTYHNDMCNSNTDYLETGMCQLGTSGGFSQNTVYFGAPGAYNWKGNTYMIQRKDWDLSEYSYKEPEDEGNLYIGYSVQLGKAVLHPSDITIVTGAPRHQHTGAVFLLSQEAGGDLRKRQVLVGAQVGAYFGSAIALADLNNDGWQDLLVGAPYYFERKEEVGGTVYVFMNQAGTSFPAEPSLLLHGPSRSAFGLSVASIGDINQDGFQDIAVGAPFEGLGKVYIYHSSSGGLLRQPQQVISGENLGLPGLASFGYSLSGQVDVDDNLYPDLLVGSLSDHIVLLRARPVINILHRTLVARPAVLDPAHCTDTSCVQVELCFAYNQSAGNPNYRRNITLAYTLEADRDRRPPRLRFARSQSAVFHGFFSMPEMRCQTLELLLMDNLRDKLRPIVISMNYSLPLRMPERPRLGLRSLDAYPVLNQAQAMENRTEVQFQKECGPDNKCESNLKMRGAFVSEQLQRLSRLQYSRDVRKLLLSINVTNTPSPERAGEDAHEALLTLEVPPALLLSSVRPPGACQANETILCELGNPFKRNQKMELLIAFEVGGVTLHTRDIQVQLELSTSSHQDNLRPVTLTLQVDYTLQASLSMVNHRLQSFFGGTVMGESGMKTVEDVGSPLKYEFQVSPVGEGLAALGTLVLGLEWPYEVANGKWLLYPTEITIHGNGSWPCQPAGDLVNPLNLTLSDPKNRPQRRRRELDPGGDQGPPPITLAAAKKAKSETALNCATGRARCVWLECPLPDATFTTNVTVRARVWNSTFIEDYRDFDRVKVDGWATLFLRTSVPSLNMENKTTLFSVDIDSELVEELPAEIELWLVLVSVGSGLLLLGLIILLLWKCNFFKRTRYYRIMPKYHAVRIREEERYPPPGGAVPTKKHWVTSWQTRDRYY