Details from NCBI annotation

Gene Symbol Calcoco2
Gene Name calcium binding and coiled-coil domain 2, transcript variant X2
Entrez Gene ID 101715405

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CALCOCO2 ENSCPOG00000021273 (Guinea pig)

Gene Details

calcium binding and coiled-coil domain 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017875, Guinea pig)

Protein Percentage 71.53%
CDS Percentage 79.95%
Ka/Ks Ratio 0.27717 (Ka = 0.1786, Ks = 0.6443)

CALCOCO2 ENSG00000136436 (Human)

Gene Details

calcium binding and coiled-coil domain 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000398523, Human)

Protein Percentage 68.85%
CDS Percentage 77.65%
Ka/Ks Ratio 0.29227 (Ka = 0.2018, Ks = 0.6904)

Calcoco2 ENSMUSG00000006056 (Mouse)

Gene Details

calcium binding and coiled-coil domain 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000087407, Mouse)

Protein Percentage 47.87%
CDS Percentage 60.57%
Ka/Ks Ratio 0.16434 (Ka = 0.522, Ks = 3.1764)

Calcoco2 ENSRNOG00000031074 (Rat)

Gene Details

calcium binding and coiled-coil domain 2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065879, Rat)

Protein Percentage 47.46%
CDS Percentage 62.89%
Ka/Ks Ratio 0.23738 (Ka = 0.5023, Ks = 2.1159)

Genome Location

Sequence Coding sequence

Length: 1356 bp    Location: 5259984..5281958   Strand: +
>XM_004859621.1
ATGGAGAAGGCGCGAGAAGAACCCCCGTCATCCACAGTGCTGCTGGACCATGCCAGCTTCTCACAGGTCATCTTCAACAACGTGGAGAAGTTCTACCTCCCCGGGGGGGATGTCACCTGCTTCTACATCTTCACCCAGCAGTTCACCCCTCGTCGAAAGGACTGGATTGGCATCTTCAAAGTGGGCTGGAAGACGACTCGGGAGTACTACACCTTCATGTGGGTGGCTCTGCCCAGAGACCCCAGCACCAAACAGCAGGAAGTCCAGTTCAGAGCTTATTACCTGCCCAAGGATGATGAATACTACCAGTTCTGCTACGTGGATCAGGATGGCATGGTCCGAGGAGCAAGCGTCCCTTTCCAGTTCCGTCCGGAAAGTGAGGAGGACATCCTGGTTGTCACCACTAAGGTGAAGGTGGAGGAGACTGAGCAGCACAACAAGGAGCTCTGCCAGGAAAACCAGGAGCTGCAGGCCCTCTGTGCCCATCTGGAGGAGCAGAACTCGGCAGCACAGGCAGAGCTTCAGAGGAAGCAGGAGGAGCTAGAAACTCTACAGAGTGTCAATAAGAAGCTGGAGCAGGAATCGGAAGAGCAGAAGGCCCATTGGGACAGCGAGCGGCTTCAACTGAAAGAACAGGACCAGCAGCTGCGCTCTGAAAATGACCAGCTGGGAACCAGAGTGGCAGAGCTGCAATCCCAGCTGCTAAGTCAAGAGAAAGAAATGGAGGAGCTGGTCCAGGGAGATCAAGAGAAGACAGAGAAATTGCAACATCTGAAAAATGGGAACGACCAGCTCTGTCTCAGTTTAACTGAACAGAGGGAGCAGCAGAAGAAGCTCGAAGAGGCGCTGGAGGAGATGCGGCTGAGAGAAACCGCTGCGCTGAAGACGCAGGCGGCCCTAATGGATGAGAACTTGGACCTGTCCAGGCGCCTAGATGACAACAAGGTTCTGTGTGATTCTCTGCAGAGAGAGAAAGAGCTGCTGGAAAGAGAAAATGATCTCTTGAGGAAGGAGAGCTGCAGGTTGCTGAGTTACCAGGCTCCGGACTTTGACTCTCTGCCACTTCAAGTGCCTGCTTGGGATCAGGAAGGCGCCAGTCAGAACCCAGGCCTGGTCTTCGGAAACCCGTATTCTGGTACCCAAGAAAGTTCCACCCCCGGCCCCGTCTCCATCGGGAAGTGCCCTGTGTGCAGCGGGGTGTCCCCGGACGGGGTCTGTGAGCACCTCGAGGAGCAGCAGCGGGCGCAGGGCCACTGTATGACGTGTCCGGTTTGCGACCAGACCTTCCCAGTGACAGAGAAGCAGATCTTCGAGGACCACGTGTTCTGCCACTACCTCAGCGCCCCGCTGGCCTAG

Related Sequences

XP_004859678.1 Protein

Calcoco2 PREDICTED: calcium-binding and coiled-coil domain-containing protein 2 isoform X2 [Heterocephalus glaber]

Length: 451 aa      View alignments
>XP_004859678.1
MEKAREEPPSSTVLLDHASFSQVIFNNVEKFYLPGGDVTCFYIFTQQFTPRRKDWIGIFKVGWKTTREYYTFMWVALPRDPSTKQQEVQFRAYYLPKDDEYYQFCYVDQDGMVRGASVPFQFRPESEEDILVVTTKVKVEETEQHNKELCQENQELQALCAHLEEQNSAAQAELQRKQEELETLQSVNKKLEQESEEQKAHWDSERLQLKEQDQQLRSENDQLGTRVAELQSQLLSQEKEMEELVQGDQEKTEKLQHLKNGNDQLCLSLTEQREQQKKLEEALEEMRLRETAALKTQAALMDENLDLSRRLDDNKVLCDSLQREKELLERENDLLRKESCRLLSYQAPDFDSLPLQVPAWDQEGASQNPGLVFGNPYSGTQESSTPGPVSIGKCPVCSGVSPDGVCEHLEEQQRAQGHCMTCPVCDQTFPVTEKQIFEDHVFCHYLSAPLA