Sequence details NCBI ID: XM_004859618.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hoxb13
Gene Name homeobox B13
Entrez Gene ID 101714685

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HOXB13 ENSCPOG00000013509 (Guinea pig)

Gene Details

homeobox B13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012164, Guinea pig)

Protein Percentage 93.66%
CDS Percentage 91.67%
Ka/Ks Ratio 0.07827 (Ka = 0.0304, Ks = 0.389)

HOXB13 ENSG00000159184 (Human)

Gene Details

homeobox B13

External Links

Gene Match (Ensembl Protein ID: ENSP00000290295, Human)

Protein Percentage 93.66%
CDS Percentage 88.26%
Ka/Ks Ratio 0.04565 (Ka = 0.0299, Ks = 0.6558)

Hoxb13 ENSMUSG00000049604 (Mouse)

Gene Details

homeobox B13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056315, Mouse)

Protein Percentage 92.61%
CDS Percentage 87.44%
Ka/Ks Ratio 0.05008 (Ka = 0.0337, Ks = 0.6728)

Hoxb13 ENSRNOG00000007491 (Rat)

Gene Details

homeo box B13 (Hoxb13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009934, Rat)

Protein Percentage 93.31%
CDS Percentage 86.97%
Ka/Ks Ratio 0.0402 (Ka = 0.0306, Ks = 0.7624)

Genome Location

Sequence Coding sequence

Length: 855 bp    Location: 5200961..5199159   Strand: -
Raw sequence   
>XM_004859618.1
ATGGAGCCAGGCAGTTATGCCACCTTGGACGGGGCCAAGGATATGGAAGGCTTGCTGGGCGCGGGCGGGGGGCGCAATCTCGTGGCCCACTCCCCGCTCTCCAGCCACCCGGCGGCGCCTACGCTGATGCCCGCTGTCAACTATGCGCCTCTGGACCTGCCGGGCTCTCCGGAGCCACCCAAGCAGTGCCACCCCTGTCCTGGGGTGCCCCAGGGGGCGTCCCCAGCTCCCGTGCCTTACGGCTACTTTGGAGGCGGGTACTACTCCTGCCGGGTGTCCCGGAGCTCGCTGAAGCCCTGTGCCCAGGCGCCCACCCTGGCTGCCTACCCCTCGGAGACGCCCGTGGCCGGGGAGGAGTATCCCAGCCGCCCCACCGAGTTTGCCTTCTACCCCGGGTACCCGGGACCCTACCAGCCCATGGCCAGTTACCTCGACGTGTCCGTGGTGCAGACCTTGGGCGCCCCGGGAGAGCCGCGCCACGACTCCCTGCTGCCGGTGGACGGTTACCAGCCCTGGGCCCTGGCCGGCGGCTGGAACAGCCAGATGTGTTGCCAGGGTGAGCAGAATCCACCGGGACCCTTCTGGAAGGCGGCGTTTGCAGACTCGAACGCACAGCACCCTTCTGACGGCTGTGCCTTCCGCCGCGGCCGCAAGAAGCGCATTCCTTACAGCAAGGGGCAGTTGCGCGAGCTGGAGCGCGAGTACGCGGTCAACAAGTTCATCACCAAGGACAAGAGGCGCAAGATCGCGGCGGCCACCAGCCTCTCCGAGCGCCAGATCACCATCTGGTTTCAGAACCGCCGGGTCAAGGAGAAGAAGGTTCTCGCCAAGGTCAAGACCAGCGCTACCCCGTGA

Related Sequences

XP_004859675.1 Protein

Hoxb13 PREDICTED: homeobox protein Hox-B13 [Heterocephalus glaber]

Length: 284 aa      View alignments
>XP_004859675.1
MEPGSYATLDGAKDMEGLLGAGGGRNLVAHSPLSSHPAAPTLMPAVNYAPLDLPGSPEPPKQCHPCPGVPQGASPAPVPYGYFGGGYYSCRVSRSSLKPCAQAPTLAAYPSETPVAGEEYPSRPTEFAFYPGYPGPYQPMASYLDVSVVQTLGAPGEPRHDSLLPVDGYQPWALAGGWNSQMCCQGEQNPPGPFWKAAFADSNAQHPSDGCAFRRGRKKRIPYSKGQLRELEREYAVNKFITKDKRRKIAAATSLSERQITIWFQNRRVKEKKVLAKVKTSATP