Sequence details NCBI ID: XM_004859577.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pnpo
Gene Name pyridoxamine 5'-phosphate oxidase
Entrez Gene ID 101702026

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PNPO ENSCPOG00000003187 (Guinea pig)

Gene Details

pyridoxamine 5'-phosphate oxidase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002886, Guinea pig)

Protein Percentage 87.31%
CDS Percentage 89.1%
Ka/Ks Ratio 0.15134 (Ka = 0.0627, Ks = 0.4144)

PNPO ENSG00000108439 (Human)

Gene Details

pyridoxamine 5'-phosphate oxidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000225573, Human)

Protein Percentage 86.21%
CDS Percentage 85.95%
Ka/Ks Ratio 0.12043 (Ka = 0.0688, Ks = 0.5709)

Pnpo ENSMUSG00000018659 (Mouse)

Gene Details

pyridoxine 5'-phosphate oxidase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018803, Mouse)

Protein Percentage 86.59%
CDS Percentage 84.16%
Ka/Ks Ratio 0.08261 (Ka = 0.0679, Ks = 0.8216)

Pnpo ENSRNOG00000046493 (Rat)

Gene Details

pyridoxamine 5'-phosphate oxidase (Pnpo), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067069, Rat)

Protein Percentage 87.36%
CDS Percentage 83.78%
Ka/Ks Ratio 0.06922 (Ka = 0.0634, Ks = 0.9158)

Genome Location

Sequence Coding sequence

Length: 786 bp    Location: 4574922..4580032   Strand: +
Raw sequence   
>XM_004859577.1
ATGACGCGCGGGCCGCTGGGCGTCACGGGGACGTTGCGGCGACTTCCCAGGTGGCTAGGGTACCTCTGCCAGCTGTGTGGTCGCGGTGCTGTCATGGACCTGGGACCCATGCGCAAGAGTTACCGTGGGGACCGCGAGGCATTTGAGGAGACTCACCTGGCCTCCCTGGATCCCATGAAGCAGTTTGCTTCCTGGTTTGAAGAGGCTGTCCAGTGTCCTGACATAGGGGAAGCCAACGCCATGTGCCTGGCTACCTGCACAAGGGACGGAAAGCCCTCCGCCCGCATGCTGCTGCTGAAGGGCTTTGGTCAGGACGGCTTTCGCTTCTTCACCAACTATGAGAGCCGGAAAGGAAAGGAACTGGACTCAAATCCCTTTGCCTCCCTTGTCTTCTACTGGGAGCCCCTTCACCGCCAGGTGCGCGTGGAGGGCCTGGTGCAGAGGCTGCCGGAGCCCGAGGCCGAGAGCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATCGGGGCTGTGGTCAGCCGCCAGAGCTCTGTGATCCCTGACCGCGAGTATCTTCGAAAGAAAAATGAGGAACTGGAGCAGCTCTACCGGGAGCAGGAGGTGCCCAAGCCGACATACTGGGGAGGCTATGTGCTGTACCCACAGGTGATAGAGTTCTGGCAAGGCCAGACGAACCGCCTGCACGACCGCATCGTCTTCCGGCGGGGCCTCCCCACGGGGGACCCCTCCCTGGGGCCCATGACCCGCAGAGGGGAGGAAGGCTGGCTCTATGAGAGGCTGGCACCATGA

Related Sequences

XP_004859634.1 Protein

Pnpo PREDICTED: pyridoxine-5'-phosphate oxidase [Heterocephalus glaber]

Length: 261 aa      View alignments
>XP_004859634.1
MTRGPLGVTGTLRRLPRWLGYLCQLCGRGAVMDLGPMRKSYRGDREAFEETHLASLDPMKQFASWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGQDGFRFFTNYESRKGKELDSNPFASLVFYWEPLHRQVRVEGLVQRLPEPEAESYFHSRPKSSQIGAVVSRQSSVIPDREYLRKKNEELEQLYREQEVPKPTYWGGYVLYPQVIEFWQGQTNRLHDRIVFRRGLPTGDPSLGPMTRRGEEGWLYERLAP