Details from NCBI annotation

Gene Symbol Plxdc1
Gene Name plexin domain containing 1, transcript variant X4
Entrez Gene ID 101715652

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PLXDC1 ENSCPOG00000020274 (Guinea pig)

Gene Details

plexin domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015847, Guinea pig)

Protein Percentage 81.71%
CDS Percentage 85.88%
Ka/Ks Ratio 0.12634 (Ka = 0.089, Ks = 0.7048)

PLXDC1 ENSG00000161381 (Human)

Gene Details

plexin domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000323927, Human)

Protein Percentage 78.4%
CDS Percentage 83.07%
Ka/Ks Ratio 0.1559 (Ka = 0.1119, Ks = 0.7176)

Plxdc1 ENSMUSG00000017417 (Mouse)

Gene Details

plexin domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103191, Mouse)

Protein Percentage 76.75%
CDS Percentage 80.96%
Ka/Ks Ratio 0.13905 (Ka = 0.1242, Ks = 0.8929)

Plxdc1 ENSRNOG00000021536 (Rat)

Gene Details

plexin domain containing 1 (Plxdc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050771, Rat)

Protein Percentage 76.55%
CDS Percentage 80.69%
Ka/Ks Ratio 0.14126 (Ka = 0.1255, Ks = 0.8888)

Genome Location

Sequence Coding sequence

Length: 1512 bp    Location: 3757668..3792506   Strand: +
>XM_004859523.1
ATGCGGGCCGCGCGCTGGCTGCTGGCGCTGTTGCTCGGGGCGGCCGCGCGCGCGCTGAGCCCCCCGCGCCCCGGAGCAGGTCACCATGAAGACCAAGGCCCTGGATGGGCTGCCAAGGGGTCCCCCCAGGACTGGCACCGGAGTGCCCAAGACAGCCCCGGGCAGGCGTCAGAGTTGGACAGGACCCGGCTGAGCCAGGACCTCGGTGGGGGCACCCTGGCCATCGACACCCTGCCGGACAACGGCACCCAGGTGGTGGAGGACAACCACAGCTACTACGTGTCCCGCATCTACGGCCCCAGTGACCCCCGCAGCCAGGAACTGTGGGTAGACATGGCCAAAGCCAACCAGACCCAGGTGCAGGTGCACAGGATCCTGTCCAGCACCCACCGGCAGGCTTCGAGAGTGGTCTTGTCCTTTGATTTCCCTTTCTACGGGCATCCTCTGCGACAGATCACCATAGCAACGGGAGGCTTTCTCTTCATGGGTGATGTGATCCACCGGATGCTCACAGCCACTCAGTACGTGGCCCCCCTGATGGCCAACTTCAACCCCGGCTACTCCGACAACTCCACGGTGGCTTACTTTGACAATGGGACAGTCTTCGTCGTGCAGTGGGACCACACCTACCTCCAGGGCCGCGAGGACAGAGGCAGTTTCACGTTCCAGGTGGCCCTGCACCGCAGCGGCCGCATTGTTTTCTGCTACAAAGAGATCCCCATGTCCGTCCGGGAGATCAGCTCCGCCCAGCACCCCGTGAAAGCAGGCCTGTCCGATGCCTTCATGGTCCTCAATCCGGCCCCAGATGTTCCAGAGTCCCGGCGCAGGACCATCTTTGAGTACCACCGCGTGGAGCTGGACACCAGCAGGATCGCCAGCGCATCTGCCGTGGAGTTCATGCCGCTGCCCACCTGCCTGCAGCTCCGGAGCTGCGACACCTGTGTCTCCTCCGACCTGACCTTCAACTGCACCTGGTGCCACGTCCTGCAGAGGTGCTCCAGTGGCTTCGACCGCTACCGCCAGGAATGGCTGGCCTATGGCTGCGCCCAGGAGGCGGAGGGCAGGACGTGTGAGGACTTCCAGGAGGAGGACCCGTACTCTGCCTCCCCCAACAGCTCCAGAAGTGCCCTGGACGGGGACATCACAGTCACCACCACCGCCTCCTCCCTCGTGGTTGACAGCTTCACCATGGAAGATGACACCAAGCTGAACTCCTCTGCAGGAGGAGACGGCCTTCAGCACAACCTGTCCCCGGACTCCCAGGGCCGCCCCGTGCACCTGGGCACCATCGTGGGCATCGTGCTGGCCATCCTGCTGGTGGCGGCAGCCATCCTGGGCGGGATTTATATCAGCGGGCACGCCAACTCCAGCGCTGCGCTCTTCCTCATGGAGCGGAGACCCCACCGCTGGCCAGCCGTGAAGTTCCGCAACCACCCCAACCACGCCAGCTACACCGAGGTGGAGCCCTCAGACCGTGAGAAGGAGGGCTTCGTGGAGGCTGAGCAGTGCTGA

Related Sequences

XP_004859580.1 Protein

Plxdc1 PREDICTED: plexin domain-containing protein 1 isoform X4 [Heterocephalus glaber]

Length: 503 aa      View alignments
>XP_004859580.1
MRAARWLLALLLGAAARALSPPRPGAGHHEDQGPGWAAKGSPQDWHRSAQDSPGQASELDRTRLSQDLGGGTLAIDTLPDNGTQVVEDNHSYYVSRIYGPSDPRSQELWVDMAKANQTQVQVHRILSSTHRQASRVVLSFDFPFYGHPLRQITIATGGFLFMGDVIHRMLTATQYVAPLMANFNPGYSDNSTVAYFDNGTVFVVQWDHTYLQGREDRGSFTFQVALHRSGRIVFCYKEIPMSVREISSAQHPVKAGLSDAFMVLNPAPDVPESRRRTIFEYHRVELDTSRIASASAVEFMPLPTCLQLRSCDTCVSSDLTFNCTWCHVLQRCSSGFDRYRQEWLAYGCAQEAEGRTCEDFQEEDPYSASPNSSRSALDGDITVTTTASSLVVDSFTMEDDTKLNSSAGGDGLQHNLSPDSQGRPVHLGTIVGIVLAILLVAAAILGGIYISGHANSSAALFLMERRPHRWPAVKFRNHPNHASYTEVEPSDREKEGFVEAEQC