Details from NCBI annotation

Gene Symbol Cacnb1
Gene Name calcium channel, voltage-dependent, beta 1 subunit, transcript variant X2
Entrez Gene ID 101714578

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CACNB1 ENSCPOG00000001061 (Guinea pig)

Gene Details

calcium channel, voltage-dependent, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000958, Guinea pig)

Protein Percentage 92.86%
CDS Percentage 89.08%
Ka/Ks Ratio 0.09057 (Ka = 0.0479, Ks = 0.5293)

CACNB1 ENSG00000067191 (Human)

Gene Details

calcium channel, voltage-dependent, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000377840, Human)

Protein Percentage 95.44%
CDS Percentage 89.64%
Ka/Ks Ratio 0.03633 (Ka = 0.0222, Ks = 0.6103)

Cacnb1 ENSMUSG00000020882 (Mouse)

Gene Details

calcium channel, voltage-dependent, beta 1 subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017552, Mouse)

Protein Percentage 95.43%
CDS Percentage 89.28%
Ka/Ks Ratio 0.03396 (Ka = 0.0222, Ks = 0.6524)

Cacnb1 ENSRNOG00000004518 (Rat)

Gene Details

calcium channel, voltage-dependent, beta 1 subunit (Cacnb1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006098, Rat)

Protein Percentage 95.6%
CDS Percentage 89.79%
Ka/Ks Ratio 0.03403 (Ka = 0.0212, Ks = 0.6235)

Genome Location

Sequence Coding sequence

Length: 1788 bp    Location: 3732265..3747727   Strand: +
>XM_004859517.1
ATGGTCCAGAAGAGCAGCATGTCCCGGGGCCCCTACCCACCCTCGCAGGAGATCCCCATGGAGGTCTTCGACCCCAGCCCGCAGGGCAAATACAGCAAGAGGAAAGGGCGGTTCAAACGCTCGGATGGGAGCACATCCTCGGATACCACATCCAATAGCTTTGTCCGCCAGGGCTCGGCAGAGTCCTATACCAGCCGCCCTTCAGACTCTGACGTGTCTCTGGAAGAAGACCGAGAAGCCTTAAGGAAGGAGGCAGAGCGCCAGGCGTTGGCCCAGCTCGAGAAAGCCAAGACCAAGCCAGTGGCATTTGCAGTTCGGACAAATGTGGGCTACAACCCGTCTCCCGGGGACGAGGTGCCTGTGCAGGGCGTGGCCATCACCTTCGAGCCCAAGGACTTCCTGCACATCAAGGAGAAATACAATAACGACTGGTGGATCGGGCGGCTGGTGAAGGAGGGCTGTGAGGTGGGCTTCATTCCCAGCCCCGTCAAGCTGGACAGCCTGCGGCTGCTGCAGGAACAGAAGCTTCGCCAGAACCGCCTCAGCTCCAGCAAATCAGGTGACAACTCCAGTTCCAGCCTGGGAGACGCGGTGACCCGCCGCCCCACCCCCCCCGCCAGTGCCAAACAGAAGCAGAAGTCGACAGATCATGTGCCCCCCTATGACGTGGTGCCTTCCATGAGGCCCATCATCCTCGTGGGACCATCGCTCAAGGGCTATGAGGTCACCGACATGATGCAGAAAGCGCTGTTCGACTTCCTGAAGCATCGGTTCGATGGCAGGATCTCCATCACCCGGGTGACAGCCGACATCTCCCTGGCCAAGCGTTCTGTCCTCAACAACCCCAGCAAGCACGTCATCATCGAGCGCTCCAACACACGCTCCAGCCTGGCCGAGGTGCAGAGTGAGATCGAGCGGATCTTCGAGCTGGCCCGGACCCTGCAGCTGGTTGCCCTGGACGCAGACACCATAAACCACCCGGCCCAGCTCTTCAAGACCTCACTGGCGCCCATCACTGTTTACATCAAGATCACCTCCCCCAAGGTCCTTCAGAGGCTCATCAAATCCCGAGGGAAATCTCAGTCCAAACACCTCAACGTCCAAATAGCAGCCTCGGAGAAGCTGGCCCAGTGTCCCCCCGAAATGTTTGACATCATCCTGGACGAGAACCAATTGGAGGACGCCTGCGAGCACCTAGCCGAGTACTTGGAAGCCTACTGGAAGGCCACGCACCCGCCCAGCAGCACGCCGCCCAATCCGCTGCTGAACCGCACCATGGCTACCGCAGCCCTGGCTGCCAGCCCCGCCCCCGTCTCCAACCTCCAGGGACCCTACCTTGCTTCCGGGGACCAGCCGCTGGAGCGGGCCACCGGGGAACACGCCAGCGTGCGCGAGTACCCAGGGGAACCCGGCCAGCCTCCGGGCCGCCACGCCCCAAGCAGGGCGGGCACCGCGCGGGCGCTGTCCCGCCAAGACACCTTTGATGCCGAGACCCCCGGTAGCCGAAACTCGGCCTACACCGAGCCGGGAGACTCGTGCGTGGACATGGAGACGGACCCCTCCGAGGGCCCGGGGCCCGGGGACCCCGCGGGGGGCGGCACCCCGCCGGTGCACCAGGGCTCCTGGGAGGAGGAGGAAGAGGAGGAGGAGGACTACCGGGAGGACCTACCGGACAACCGGGGCCGGGCCCGGAGCAAGGCCCGCTACTGCGCCGAGGGCGGGGGCCCGGGCCTGGGGCGCAATAAGAACGAGCTGGAGGGCTGGGGCCGGGGCGTCTACATCCGCTGA

Related Sequences

XP_004859574.1 Protein

Cacnb1 PREDICTED: voltage-dependent L-type calcium channel subunit beta-1 isoform X2 [Heterocephalus glaber]

Length: 595 aa      View alignments
>XP_004859574.1
MVQKSSMSRGPYPPSQEIPMEVFDPSPQGKYSKRKGRFKRSDGSTSSDTTSNSFVRQGSAESYTSRPSDSDVSLEEDREALRKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPGDEVPVQGVAITFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLDSLRLLQEQKLRQNRLSSSKSGDNSSSSLGDAVTRRPTPPASAKQKQKSTDHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKHVIIERSNTRSSLAEVQSEIERIFELARTLQLVALDADTINHPAQLFKTSLAPITVYIKITSPKVLQRLIKSRGKSQSKHLNVQIAASEKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKATHPPSSTPPNPLLNRTMATAALAASPAPVSNLQGPYLASGDQPLERATGEHASVREYPGEPGQPPGRHAPSRAGTARALSRQDTFDAETPGSRNSAYTEPGDSCVDMETDPSEGPGPGDPAGGGTPPVHQGSWEEEEEEEEDYREDLPDNRGRARSKARYCAEGGGPGLGRNKNELEGWGRGVYIR