Details from NCBI annotation

Gene Symbol Rara
Gene Name retinoic acid receptor, alpha, transcript variant X6
Entrez Gene ID 101722948

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RARA ENSCPOG00000007730 (Guinea pig)

Gene Details

retinoic acid receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006966, Guinea pig)

Protein Percentage 93.72%
CDS Percentage 90.84%
Ka/Ks Ratio 0.06281 (Ka = 0.0365, Ks = 0.5804)

RARA ENSG00000131759 (Human)

Gene Details

retinoic acid receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000254066, Human)

Protein Percentage 96.97%
CDS Percentage 92.42%
Ka/Ks Ratio 0.02047 (Ka = 0.013, Ks = 0.6335)

Rara ENSMUSG00000037992 (Mouse)

Gene Details

retinoic acid receptor, alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069744, Mouse)

Protein Percentage 96.1%
CDS Percentage 89.47%
Ka/Ks Ratio 0.0233 (Ka = 0.0197, Ks = 0.8437)

Rara ENSRNOG00000009972 (Rat)

Gene Details

retinoic acid receptor, alpha (Rara), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008659, Rat)

Protein Percentage 86.24%
CDS Percentage 82.02%
Ka/Ks Ratio 0.07281 (Ka = 0.0903, Ks = 1.2405)

Genome Location

Sequence Coding sequence

Length: 1389 bp    Location: 2966167..2934995   Strand: -
>XM_004859447.1
ATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGTGGGCACCTCAATGGGTACCCAGTGCCCCCCTACGCCTTCTTCTTCCCCCCGATGTTGGGTGGACTGTCGCCGCCGGGCACCCTGACCTCGCTGCCGCACCAGCTTCCCGTGAGCGGATACAGCACCCCGTCCCCGGCCACCATCGAGACCCAGAGCAGCAGCTCCGAAGAGATCGTACCCAGCCCGCCCTCGCCGCCACCCCTGCCCCGCATCTACAAGCCCTGCTTTGTCTGCCAGGACAAATCCTCAGGCTACCACTATGGGGTCAGCGCCTGTGAAGGCTGCAAGGGCTTCTTCCGCCGCAGCATCCAGAAGAACATGGTGTACACTTGTCACCGGGACAAGAACTGCATCATCAACAAGGTGACCCGGAACCGCTGCCAGTACTGCCGGCTGCAGAAGTGCTTCGAAGTGGGCATGTCCAAGGAGTCGGTGAGGAACGACCGGAACAAGAAGAAGAAGGAGGCACCCAAGCCAGAGAGCTCGGAGAGCTGCACGCTGACGCCCGAGGTCGGGGAGCTCATCGAGAAGGTGCGCAAAGCGCACCAGGAGACCTTCCCCGCCCTCTGCCAGCTGGGCAAATACACTACGAACAACAGCTCGGAGCAGCGTGTGTCACTGGACATCGACCTCTGGGACAAGTTCAGCGAGCTGTCCACCAAGTGCATCATCAAGACGGTGGAGTTCGCCAAGCAGCTGCCTGGCTTCACCACCCTCAGCATCGCCGACCAGATCACCCTCCTCAAGGCTGCCTGCCTGGACATCCTGATCCTGCGGATCTGCACGCGGTACACGCCGGAGCAGGACACCATGACCTTCTCCGATGGGCTAACCCTGAACCGGACCCAGATGCACAACGCTGGCTTTGGTCCCCTCACCGACCTGGTCTTTGCCTTCGCCAACCAGCTGCTGCCCCTGGAGATGGACGATGCAGAGACGGGGCTGCTCAGCGCCATCTGCCTCATCTGTGGAGACCGGCAGGACCTGGAGCAGCCCGAGCGGGTGGACCTGCTGCAGGAGCCGCTGCTGGAAGCGCTGAAGGTCTACGTGAGGAAGCGCAGGCCCAGCCGCCCGCACATGTTCCCCAAGATGCTCATGAAGATCACCGACCTGCGCAGCATCAGCGCCAAGGGGGCTGAGCGCGTGATCACGCTGAAGATGGAGATCCCGGGCTCCATGCCGCCGCTCATCCAGGAGATGCTGGAGAACTCCGAGGGCTTGGACACTCTGAGCGGACAGCCGGGGGGCGGGGGGCGGGAGGGCGGTGGCCTGGCCACCGCGACGGGTAGTTGTAGCCCCAGCCTCAGCCCCGCCTCCAACAGAAGCAGCCCGGCCACCCACTCGCCGTGA

Related Sequences

XP_004859504.1 Protein

Rara PREDICTED: retinoic acid receptor alpha-A isoform X6 [Heterocephalus glaber]

Length: 462 aa      View alignments
>XP_004859504.1
MASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGTLTSLPHQLPVSGYSTPSPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEAPKPESSESCTLTPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLSIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPERVDLLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLDTLSGQPGGGGREGGGLATATGSCSPSLSPASNRSSPATHSP