Details from NCBI annotation

Gene Symbol Ghdc
Gene Name GH3 domain containing, transcript variant X8
Entrez Gene ID 101723659

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GHDC ENSCPOG00000020960 (Guinea pig)

Gene Details

GH3 domain containing

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019644, Guinea pig)

Protein Percentage 41.16%
CDS Percentage 52.83%
Ka/Ks Ratio 0.04806 (Ka = 0.6003, Ks = 12.49)

GHDC ENSG00000167925 (Human)

Gene Details

GH3 domain containing

External Links

Gene Match (Ensembl Protein ID: ENSP00000301671, Human)

Protein Percentage 55.94%
CDS Percentage 64.72%
Ka/Ks Ratio 0.27852 (Ka = 0.3783, Ks = 1.3582)

Ghdc ENSMUSG00000017747 (Mouse)

Gene Details

GH3 domain containing

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017891, Mouse)

Protein Percentage 52.11%
CDS Percentage 62.58%
Ka/Ks Ratio 0.35811 (Ka = 0.4384, Ks = 1.2241)

Ghdc ENSRNOG00000018906 (Rat)

Gene Details

GH3 domain containing (Ghdc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025590, Rat)

Protein Percentage 51.12%
CDS Percentage 61.87%
Ka/Ks Ratio 0.37561 (Ka = 0.4536, Ks = 1.2077)

Genome Location

Sequence Coding sequence

Length: 1506 bp    Location: 1741112..1744361   Strand: +
>XM_004859352.1
ATGCTGTGCTGGCTGGTCCTGCTCCTGCTGCCCCTCCTGCCGCTGCTCCTGCTGCTGCTGCCCGCTGTGGCCCTGCACAGATGCCTGGGCGCCAGTCTGGCCCGGCTCGCCAGCCTCCAGCAGCAGGTGGCCTGGGGAGCCCTGGGCTGGGCGGCCACCTGGCAGCGGTACAGACTGGAGCAGAGCACTCGGCACGCAGCCCGGAGCCAGCATCAGGCCCTGGCGAGGTGCCTTCGGGGAGCCCGCCGCGCCCCCGGGGGGAGCACAGACATGAGCACCTTCCGGAACCTTCTCCCTCTGACCAAGCCTAGCCAGGCCCCGGAGGAACAGAATGGGGGGCAGGAGCAGCTCCCCGCCTCGAGCCAGTACCCCCAGGAGGCTGCCCTGCAGGCCACAGTGCTGGGTGTGGCGGCCCTCGGCCAGGCCCACCCTGCCACGATGTCTCCAGGGGCCACGGCCCGTGTGACCCCCGCATCCCCATGGCCGTGCCCGCTGCCCTGGCTGGGGCCCATCCTGGGCCAGGCGGGTCCCCCCGGAGCCGAGGACCCCAGGGCCCTGCTGCTGGCCGCCCTGAGGTCCCCAGGGCTCAGGGCCCTGGAAGCCCGGACGGCCACGGAGCTCCTAGACGTCTTCTCGGGCTTGGAGGCTGCTGGCCAGGAGCTGGTAGAGGCCATAGCTGCAGGGGACCCTGGGGCGCCGCTCCCAGGTCGGGCGGCCGAGGTGCGGGCAGCCCTGGAGCGGGGACCCCGGGGACTGGCCCTGCAGCTCTGGCCACAGCTGCAGGTGGTGGTGACTCTGGATGCCGGCGGCCAGGCTGAGGCGGCCGCTGCCCTCAGGGCCTTGTGGTGCCACGGCCTGGCCTTCTTCTCTCCAGCATATGCAGCCTCTGGAGGTGCCGCCTGGGCGATGTCATACAGGTGGTTGGCGCCCATAACCAGTGTCCGGTGGTCAGGTTCGTGGACAGGTAGGCGCTGGGTGCCGAGGGCTGCCCCGTGCGAGCCCTGGGCTCCGGCACCTCTGCCTTCTTCCTCCCAGGCTGGGCCAGGCCCTGAGCGTCCGAGGGGAAGTCACCAGCGAGCGTCTGTTCTCCCAGGCCCTGGGCCGGGCCGTGGTGCAGTGGCCAGGTGCCAAGTTGCTGGACCACTGCTGCGTGGAGAGCAGCATCCTGGACTCCTCCGAGGGCTCCGCTCTGCACTACGAGGTGTTCCTGGAGCTGAGGGGGCTGAGGAATCTGTCGGAGGAAAATCGCAACAAACCCGCCTGCCTCTCTCCGGCCTCTGTCCCCAGCTGGACCTCTGCCTGCAGGATGCCTCCCCACACTACAAGTTCCTGCGCTTCCGGGGCAGTGTGGGCCCTTCCCATGTGCACCTGGTGGCCCGTGGGGCCTTCAGTGCCCTCCGGGCTGCCCTGGCTGCTCGGCTCTCGTCCTCTGCTCCTCCTGCGATGCCTCGAGTGCTGAGGCACAGGCAGCTGGCCCAGCTCCTGCAGAGGAGGTTGCTGTCCTGA

Related Sequences

XP_004859409.1 Protein

Ghdc PREDICTED: GH3 domain-containing protein isoform X8 [Heterocephalus glaber]

Length: 501 aa      View alignments
>XP_004859409.1
MLCWLVLLLLPLLPLLLLLLPAVALHRCLGASLARLASLQQQVAWGALGWAATWQRYRLEQSTRHAARSQHQALARCLRGARRAPGGSTDMSTFRNLLPLTKPSQAPEEQNGGQEQLPASSQYPQEAALQATVLGVAALGQAHPATMSPGATARVTPASPWPCPLPWLGPILGQAGPPGAEDPRALLLAALRSPGLRALEARTATELLDVFSGLEAAGQELVEAIAAGDPGAPLPGRAAEVRAALERGPRGLALQLWPQLQVVVTLDAGGQAEAAAALRALWCHGLAFFSPAYAASGGAAWAMSYRWLAPITSVRWSGSWTGRRWVPRAAPCEPWAPAPLPSSSQAGPGPERPRGSHQRASVLPGPGPGRGAVARCQVAGPLLRGEQHPGLLRGLRSALRGVPGAEGAEESVGGKSQQTRLPLSGLCPQLDLCLQDASPHYKFLRFRGSVGPSHVHLVARGAFSALRAALAARLSSSAPPAMPRVLRHRQLAQLLQRRLLS