Details from NCBI annotation

Gene Symbol Hcrt
Gene Name hypocretin (orexin) neuropeptide precursor
Entrez Gene ID 101723299

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HCRT ENSCPOG00000023244 (Guinea pig)

Gene Details

hypocretin (orexin) neuropeptide precursor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015011, Guinea pig)

Protein Percentage 90.65%
CDS Percentage 90.97%
Ka/Ks Ratio 0.04985 (Ka = 0.0386, Ks = 0.774)

HCRT ENSG00000161610 (Human)

Gene Details

hypocretin (orexin) neuropeptide precursor

External Links

Gene Match (Ensembl Protein ID: ENSP00000293330, Human)

Protein Percentage 88.18%
CDS Percentage 85.15%
Ka/Ks Ratio 0.04525 (Ka = 0.0521, Ks = 1.1506)

Hcrt ENSMUSG00000045471 (Mouse)

Gene Details

hypocretin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000057578, Mouse)

Protein Percentage 84.55%
CDS Percentage 79.09%
Ka/Ks Ratio 0.03333 (Ka = 0.0831, Ks = 2.4938)

Hcrt ENSRNOG00000018892 (Rat)

Gene Details

hypocretin (Hcrt), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025547, Rat)

Protein Percentage 87.27%
CDS Percentage 80.3%
Ka/Ks Ratio 0.03131 (Ka = 0.0687, Ks = 2.1944)

Genome Location

Sequence Coding sequence

Length: 333 bp    Location: 1745498..1746633   Strand: +
>XM_004859344.1
ATGAACCTGCCCCCCACAAAGGTCTCCTGCGCCACCGTGACGCTGCTGCTGCTCCTGCTCCTGCCGCCCGCGCTGCTGTCCCCTGGGGCGGCCGCGCAGCCCCTGCCCGACTGCTGTCGCCAGAAAACCTGCTCGTGCCGGCTGTACGAGCTGCTGCACGGCGCGGGCAACCACGCGGCTGGGATCCTCACGCTGGGCAAGCGGCGGGCGGGGCCCGCGGGGCTGCAGGGCCGGCTGCAGCGCCTCCTGCTGGCGGGCGGGAACCACGCGGCCGGGATCCTCACCATGGGCCGGCGCGCGGGCGCGCAGCCGGGGGCGCGGCGCGGGCTCTGA

Related Sequences

XP_004859401.1 Protein

Hcrt PREDICTED: orexin [Heterocephalus glaber]

Length: 110 aa      View alignments
>XP_004859401.1
MNLPPTKVSCATVTLLLLLLLPPALLSPGAAAQPLPDCCRQKTCSCRLYELLHGAGNHAAGILTLGKRRAGPAGLQGRLQRLLLAGGNHAAGILTMGRRAGAQPGARRGL