Details from NCBI annotation

Gene Symbol Lsm12
Gene Name LSM12 homolog (S. cerevisiae), transcript variant X1
Entrez Gene ID 101724962

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSM12 ENSCPOG00000012860 (Guinea pig)

Gene Details

LSM12 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011575, Guinea pig)

Protein Percentage 97.95%
CDS Percentage 96.07%
Ka/Ks Ratio 0.06457 (Ka = 0.0093, Ks = 0.1446)

LSM12 ENSG00000161654 (Human)

Gene Details

LSM12 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000466718, Human)

Protein Percentage 100.0%
CDS Percentage 95.38%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1967)

Lsm12 ENSMUSG00000020922 (Mouse)

Gene Details

LSM12 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021297, Mouse)

Protein Percentage 100.0%
CDS Percentage 94.36%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2446)

Lsm12 ENSRNOG00000020894 (Rat)

Gene Details

LSM12 homolog (S. cerevisiae) (Lsm12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028368, Rat)

Protein Percentage 100.0%
CDS Percentage 95.38%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1981)

Genome Location

Sequence Coding sequence

Length: 588 bp    Location: 846437..864182   Strand: +
>XM_004859248.1
ATGGCGGCTCCTCCGGGCGAGTACTTCAGCGTCGGGAGCCAGGTGTCGTGCCGGACGTGCCAGGAGCAGCGGCTGCAGGGCGAGGTGGTAGCCTTCGACTACCAGTCCAAGATGCTGGCTTTAAAATGTCCCTCTTCCAGTGGAAAGCCCAACCATGCCGACATCCTGCTCATAAACTTACAGTATGTTTCAGAAGTGGAAATAATTAACGACCGGACAGAAACTCCTCCTCCCCTAGCTTCACTCAATGTTAGTAAGCTCGCCAGCAAAGCGCGGACGGAGAAGGAGGAGAAGCTGAGCCAGGCCTATGCAATCAGTGCTGGCGTCTCCCTTGAGGGCCAGCAGCTCTTCCAGACCATCCACAAGACCATTAAAGACTGTAAATGGCAAGAAAAAAACATCGTAGTCATGGAAGAAGTTGTTATTACGCCCCCCTATCAGGTGGAAAACTGTAAAGGCAAAGAGGGGAGCGCACTGAGCCATGTACGCAAAATAGTGGAAAAACATTTTAGAGACGTGGAAAGCCAAAAGATCCTGCAGCGCTCACAAGCCCAGCAGCCACAGAAGGAGGCGGCCCTGTCGTCCTGA

Related Sequences

XP_004859305.1 Protein

Lsm12 PREDICTED: protein LSM12 homolog isoform X1 [Heterocephalus glaber]

Length: 195 aa      View alignments
>XP_004859305.1
MAAPPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYQSKMLALKCPSSSGKPNHADILLINLQYVSEVEIINDRTETPPPLASLNVSKLASKARTEKEEKLSQAYAISAGVSLEGQQLFQTIHKTIKDCKWQEKNIVVMEEVVITPPYQVENCKGKEGSALSHVRKIVEKHFRDVESQKILQRSQAQQPQKEAALSS