Details from NCBI annotation

Gene Symbol Ubtf
Gene Name upstream binding transcription factor, RNA polymerase I, transcript variant X1
Entrez Gene ID 101719434

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UBTF ENSCPOG00000009039 (Guinea pig)

Gene Details

upstream binding transcription factor, RNA polymerase I

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008120, Guinea pig)

Protein Percentage 95.21%
CDS Percentage 91.22%
Ka/Ks Ratio 0.04134 (Ka = 0.0285, Ks = 0.69)

UBTF ENSG00000108312 (Human)

Gene Details

upstream binding transcription factor, RNA polymerase I

External Links

Gene Match (Ensembl Protein ID: ENSP00000302640, Human)

Protein Percentage 97.51%
CDS Percentage 91.71%
Ka/Ks Ratio 0.01186 (Ka = 0.0102, Ks = 0.8607)

Ubtf ENSMUSG00000020923 (Mouse)

Gene Details

upstream binding transcription factor, RNA polymerase I

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133844, Mouse)

Protein Percentage 96.73%
CDS Percentage 90.01%
Ka/Ks Ratio 0.01305 (Ka = 0.0137, Ks = 1.0496)

Ubtf ENSRNOG00000020937 (Rat)

Gene Details

upstream binding transcription factor, RNA polymerase I (Ubtf), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063740, Rat)

Protein Percentage 96.99%
CDS Percentage 88.96%
Ka/Ks Ratio 0.00973 (Ka = 0.0127, Ks = 1.3095)

Genome Location

Sequence Coding sequence

Length: 2298 bp    Location: 768698..778767   Strand: +
>XM_004859228.1
ATGAACGGAGAAGCCGACTGCCCCACAGACCTGGAAATGGCCGCCCCCAAAGGCCAAGACCGCTGGTCCCAGGAAGACATGCTGACCCTGCTGGAGTGCATGAAGAACAACCTTCCATCCAATGACAGCTCCAAGTTCAAAACCACTGAGTCCCACATGGACTGGGAAAAAGTCGCATTTAAAGACTTCTCCGGGGACATGTGCAAGCTCAAATGGGTGGAGATTTCAAACGAGGTGAGGAAGTTCCGAACATTGACAGAATTGATCCTCGATGCTCAGGAACACGTTAAAAACCCTTACAAAGGCAAAAAGCTCAAGAAACACCCTGACTTCCCAAAGAAGCCCCTCACGCCCTACTTCCGCTTCTTCATGGAGAAGAGGGCCAAGTATGCGAAGCTCCACCCAGAGATGAGCAACCTGGACCTGACCAAGATTCTGTCCAAGAAATACAAGGAGCTTCCGGAGAAGAAGAAGATGAAGTATATTCAGGACTTCCAGAGGGAAAAACAGGAGTTCGAGCGAAACCTGGCCCGGTTCAGGGAGGATCACCCCGACCTTATCCAGAATGCAAAGAAGTCGGACATCCCTGAGAAGCCCAAAACCCCCCAGCAGCTGTGGTATACTCACGAGAAGAAGGTGTACCTCAAAGTGCGGCCAGATGCCACTACGAAGGAGGTGAAGGACTCCCTGGGGAAGCAGTGGTCTCAGCTCTCGGACAAAAAGAGGCTGAAATGGATTCATAAGGCCCTGGAGCAGCGGAAGGAGTACGAGGAGATCATGCGGGACTACATCCAGAAGCACCCCGAGCTGAACATCAGCGAGGAGGGCATCACCAAGTCGACCCTCACCAAGGCCGAGCGCCAGCTCAAGGACAAGTTCGACGGGCGACCCACCAAGCCGCCTCCGAACAGCTACTCGCTGTACTGCGCTGAGCTGATGGCCAACATGAAGGATGTGCCCAGCACGGAGCGCATGGTGCTGTGCAGCCAGCAGTGGAAGCTGCTGTCCCAGAAGGAGAAGGACGCCTACCACAAGAAGTGCGACCAGAAAAAGAAAGACTACGAGGTGGAACTGCTGCGCTTCCTGGAGAGCCTGCCGGAGGAGGAGCAGCAGCGGGTGCTGGGTGAGGAGAAGATGCTGAACATCAGCAAGAAGCAGGCGGGCAGCCCGGCCGCCAAGAAGCCGGCGCAGGAGGGTGGCAAGGCTGGCGCCGAGAAGCCCAAGCGGCCTGTGTCGGCCATGTTCATCTTCTCCGAGGAGAAGCGGCGGCAGCTGCAGGAGGAGCGGCCCGAGCTGTCGGAGAGCGAGCTGACCCGCCTGCTGGCGCGCATGTGGAACGACCTGTCCGAGAAGAAGAAGGCCAAGTACAAGGCCCGCGAGGCTGCCCTGAAGGCGCAGTCCGACCGGAAGCCGGGCGCCGAGCGCGAGGACCGCGGCAAGCTGCCCGAGTCGCCCAAGCGGGCCGAGGAGATTTGGCAGCAGAGCGTCATCGGCGACTACCTGGCACGCTTCAAGAACGACCGGGTGAAGGCCCTGAAGGCCATGGAGATGACCTGGAACAACATGGAGAAGAAGGAGAAGTTGATGTGGATTAAGAAGGCAGCCGAGGACCAGAAGCGCTATGAGAGAGAGCTGAGTGAGATGCGGGCGCCCCCCGCCGCCGCCAACTCCTCCAAGAAGATGAAGTTCCAGGGAGAGCCCAAGAAGCCCCCGATGAACGGTTACCAGAAGTTCTCCCAGGAGCTGCTGTCCAACGGGGAGCTGAACCACCTGCCGCTGAAGGAGCGCATGGTGGAGATCGGCAGCCGCTGGCAGCGCATCTCACAGAGCCAGAAGGAGCACTACAAGAAGCTGGCCGAGGAGCAGCAGAAGCAGTACAAGGTGCACCTGGACCTGTGGGTCAAGAGCCTGTCTCCCCAGGACCGAGCAGCGTACAAGGAGTACATCTCCAACAAGCGCAAGAGCATGACCAAGCTGCGGGGCCCGAACCCCAAGTCCAGCCGCACTGCCCTGCAGTCCAAGTCGGAGTCCGAGGACGAGGACGACGAGGACGAGGACGACGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGGAGAACGGCGACTCCTCCGAGGACGGTGGGGACTCCTCGGAGTCCAGCAGCGAGGAGGAGAGCGAGGACGGGGATGAGAACGAGGAGGACGAGGACGACGAGGACGACGACGAGGACGACGACGAGGACGAGGATAACGAGTCCGAGGGCAGCAGCTCCAGCTCCTCGTCCTCGGGGGACTCCTCGGACTCGGACTCCAACTGA

Related Sequences

XP_004859285.1 Protein

Ubtf PREDICTED: nucleolar transcription factor 1 isoform X1 [Heterocephalus glaber]

Length: 765 aa      View alignments
>XP_004859285.1
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAFKDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNISKKQAGSPAAKKPAQEGGKAGAEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSDRKPGAEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAAANSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTALQSKSESEDEDDEDEDDEEEEEEEEEDEENGDSSEDGGDSSESSSEEESEDGDENEEDEDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN