Sequence details NCBI ID: XM_004859212.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Itga2b
Gene Name integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41), transcript variant X4
Entrez Gene ID 101714332

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ITGA2B ENSCPOG00000006801 (Guinea pig)

Gene Details

integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006129, Guinea pig)

Protein Percentage 79.74%
CDS Percentage 84.23%
Ka/Ks Ratio 0.1701 (Ka = 0.1108, Ks = 0.6514)

ITGA2B ENSG00000005961 (Human)

Gene Details

integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)

External Links

Gene Match (Ensembl Protein ID: ENSP00000262407, Human)

Protein Percentage 75.83%
CDS Percentage 80.27%
Ka/Ks Ratio 0.14779 (Ka = 0.1361, Ks = 0.9208)

Itga2b ENSMUSG00000034664 (Mouse)

Gene Details

integrin alpha 2b

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099375, Mouse)

Protein Percentage 74.75%
CDS Percentage 77.28%
Ka/Ks Ratio 0.14189 (Ka = 0.1556, Ks = 1.0964)

Itga2b ENSRNOG00000022071 (Rat)

Gene Details

Protein Itga2b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052051, Rat)

Protein Percentage 73.28%
CDS Percentage 76.69%
Ka/Ks Ratio 0.15107 (Ka = 0.164, Ks = 1.0854)

Genome Location

Sequence Coding sequence

Length: 3069 bp    Location: 683877..695262   Strand: +
Raw sequence   
>XM_004859212.1
ATGGCCCGAGCACTGTGCCTCCTGCATGCGCTCTGGCTCCTGGGGCCTGTTCCTGCCCCTGCAGCCTGGGCCTCGAACCTGGATGCTGTGCAGCCCACCATCTACACAGGCCCCAACGGCAGCCACTTTGGGTTCTCGGTGGACTTTCACAGAGACAGCCATGGGGGGGTGGCCGTCGTAGTTGGCGCCCCCAGGGCCAGGGGCCCGGATCAGGAGGAGACGGGCGCCGTATTCCTGTGCCGCTGGAGAGCGGCAGGCGGCTCCTGCTCCTCGCTGCTCTTCGATCTCCGGGACGAGACCCGGAACGCGAGCTCCCAGACCTTCCAGGTCTTCAAGGCGCGGCAAGGCCTCGGGGCGTCGGTCGCCAGCTGGGACCACGTCATCGTGGCCTGCGCGCCCTGGCAGCACTGGAACGCCCTGGAAAAGACTCAGGAGGCGGAGAAGACGCCCGTCGGCGGTTGCTTCCTGGCCCAGCTCCAGACCGGCGGCCGCGCGGAGTACTCGCCGTGCCGCGCCAACACCATGAGCCGGGTCTACAAGGACTGGCTGTTCAGTGGAGATAGGCGATACTGCGAAGCGGGCTTCAGCTCCGCGATCACCCAGGCTGGCGAGCTGGTGCTGGGGGCCCCTGGCGGCTACTTTTTCCTGGGTCTCCTGGCCCGGGCGCCGATTGCCAGCATCCTCTCGAGCTTCCAGCCCGCCACCCTCCTGTGGCACGTGCCCAACCAGACCTTCACCTTCGACTCCAGCGGCGCCGAGTTCTACGACGGCTACCGGGGGTACTCGGTGGCCGTCGGCGAGTTCAACGGAGACCTGAGAACTCCAGAGTATGTCGTCGGTGCCCCTACTTGGAGCTGGACCCTGGGAGCGGTGGAAATCCTGGACTCTCACCACCTGACGCTGCACCGGCTGCACGGGGAGCAGATGGCTTCATACTTCGGGCACTCCGTGGCTGTCACTGATGTCAACGGGGACAGCAGGCACGACCTGCTGGTGGGCGCCCCGTTGTTCATGGACAGCCGGGCCGATCTCAAGCTGGCTGAGGTGGGGCGTGTGTACCTGTTCCTGCAGTCCCCGGCCCCCCGTGTGCTGGGCACCCCCAGCCTCCTGCTGACCGGCACTTGGCTCTATGGGCGGTTCGGCTCCGCCATCGCACCCCTGGGCGACCTCAACCGGGATGGCTACAACGATGTGGCGGTGGCCGCCCCCTACGGGGGTCCCAGCGGCCAGGGCCAGGTGCTGGTGTTCCTGGGCCACAGCAAGGGGCTGAGCGCACAGCCCTCCCAGGTCCTGGACAGCCCCTTCCCCACAGGCTCTGGCTTTGGCTTCTCGCTGCGAGGGGCCACAGACGTCGATGACAACGGATACCCAGACCTGGTGGTGGGAGCCTATGGGGCCGGCAAGGTGGCAGTGTACAGAGCCCGGCCGGTGGTGACAGCCACCGTCCAGTTGCTGGTGAAGGACACGCTGAACCCCACGGAGAAGAGGTGTATCCTGCCCCAGACCCGGACCCCAGTGAGCTGCTTCAGCATCCAGATGTGTGTGGGAGCTGCCGGGCACAGCATTCCACAGAAGCTGCGGCTGAGCGCCGAGCTGCAGCTGGACCGGCAGAAGCCCCGCCAGGGCCGCCGGGTGCTGCTCCTGGAGTCGCAGCAGGCGGGCACCACACTGAGCCTGGACCTGGGCGGGAGGCACAGCCCCGTCTGCCACACGACCACCGCCTTCCTTCGAGACAAGGCCGACTTCCGGGACAAGCTGAGCCCCATCCTGCTCAGCCTCAACGTGTCACTGCCACCAACGGAGGCTGGCAGGGGCCCTGACCTGGTGCTGGCCGGGGACACGCACATCCAGGAGCAGACCCGCATCATCCTGGACTGTGGGGAGGACGACGTGTGTGTGCCCCAGCTGCAGCTCAACGCCACTGTGGCGGGTGCTCCGCTGCTCATTGGGGCCGAGAACCTGCTGGAGCTCCACGCCACCGTGGCCAACGAAGGCGAGGGGGCCTATGAGGCAGAGCTGGCCTTGCAGCTGCCCCCGGGCGCCCACTACATGCGGGCACTGAGCGACATGCCGGGCTTCGAGAGGCTCGTGTGCAGCCAGAAGGAGGAGAACGGGAGCAGGCTGGTGCTCTGCGAGCTGGGCAACCCCATGGGAAAGGACGTCCGGGTAGGGGTCACCGTGTGGGTGAGCGTGGGGGACCTGGAGCGGGCCGGCCAGCATGCGACCTTCCGGCTGCAGGTCAGGAGCCGTAACAGCCGGAACCCCAACAGCCAGATGCTGCTGCTGCAGGTGCCGGTGCGGGCCGAGGCCAGGGTGGAGCTTCTAGGGAACTCCTTCCCGGCTTCCCTGGTGGTGTCAGCAGAAGAGGGTGCCAAGGAGCGGGGCAGCTTGGCCAGCTCGGCCCCCAGGGTGGAGCACACCTATGAGCTCCACAACAGAGGCCCAGGCTCCGTGCGCGGCCTGCGCCTCCACGTGCACCTGCCCGGGCAGTCCCAGCCCACCGACCCGCTGTACATCCTGGACGTGCAGCCCCAGGGCGGCCTGCAGTGCTCCCCACAGCCCTCGCCCAACCCCCTGGAGCTGGACTGGAGGCCGCACACCGCCAGGGCGGCCCCCACGCGCCAGGCGCATCACCCGCGGGAGCGCAGGCAGGCTGGGCCGGGGCAGCCGATGCTGGTGAGCTGCGACTCGGCGCCCTGCACGGTGGTGCAGTGTGAGCTTCAGGAGATGGCGCCCGGGCAGCGGGCCATGGTCACCGTGCTGGCCTTGCTGTGGCGGCCCGGCCTCGGCCAGGGGCCGCCGGAGCTGACGGAACTGCAGTCGCGCGCGTGGTTTGACGTCTCCTCGCTCCCGTACGCGGTCCCGGCGCTCAGCCTGCCGAGCGGAGAGGCCGTGGTGCGGACGCAGCTGCTGCGCGCCCCGGAGGAGCGGGCGGTGCCCACCTGGTGGGTGCTGGTGGGTGCGCTGGGCGGCCTGCTGCTGCTCGCGCTGCTGGTGCTGGCCATGTGGAAGATGGGCTTCTTCAAGCGGACCCGGCCTACCCTGGACGAAGACGAAGAGGAGGAGTGA

Related Sequences

XP_004859269.1 Protein

Itga2b PREDICTED: integrin alpha-IIb isoform X4 [Heterocephalus glaber]

Length: 1022 aa      View alignments
>XP_004859269.1
MARALCLLHALWLLGPVPAPAAWASNLDAVQPTIYTGPNGSHFGFSVDFHRDSHGGVAVVVGAPRARGPDQEETGAVFLCRWRAAGGSCSSLLFDLRDETRNASSQTFQVFKARQGLGASVASWDHVIVACAPWQHWNALEKTQEAEKTPVGGCFLAQLQTGGRAEYSPCRANTMSRVYKDWLFSGDRRYCEAGFSSAITQAGELVLGAPGGYFFLGLLARAPIASILSSFQPATLLWHVPNQTFTFDSSGAEFYDGYRGYSVAVGEFNGDLRTPEYVVGAPTWSWTLGAVEILDSHHLTLHRLHGEQMASYFGHSVAVTDVNGDSRHDLLVGAPLFMDSRADLKLAEVGRVYLFLQSPAPRVLGTPSLLLTGTWLYGRFGSAIAPLGDLNRDGYNDVAVAAPYGGPSGQGQVLVFLGHSKGLSAQPSQVLDSPFPTGSGFGFSLRGATDVDDNGYPDLVVGAYGAGKVAVYRARPVVTATVQLLVKDTLNPTEKRCILPQTRTPVSCFSIQMCVGAAGHSIPQKLRLSAELQLDRQKPRQGRRVLLLESQQAGTTLSLDLGGRHSPVCHTTTAFLRDKADFRDKLSPILLSLNVSLPPTEAGRGPDLVLAGDTHIQEQTRIILDCGEDDVCVPQLQLNATVAGAPLLIGAENLLELHATVANEGEGAYEAELALQLPPGAHYMRALSDMPGFERLVCSQKEENGSRLVLCELGNPMGKDVRVGVTVWVSVGDLERAGQHATFRLQVRSRNSRNPNSQMLLLQVPVRAEARVELLGNSFPASLVVSAEEGAKERGSLASSAPRVEHTYELHNRGPGSVRGLRLHVHLPGQSQPTDPLYILDVQPQGGLQCSPQPSPNPLELDWRPHTARAAPTRQAHHPRERRQAGPGQPMLVSCDSAPCTVVQCELQEMAPGQRAMVTVLALLWRPGLGQGPPELTELQSRAWFDVSSLPYAVPALSLPSGEAVVRTQLLRAPEERAVPTWWVLVGALGGLLLLALLVLAMWKMGFFKRTRPTLDEDEEEE