Details from NCBI annotation

Gene Symbol Gfap
Gene Name glial fibrillary acidic protein, transcript variant X3
Entrez Gene ID 101707892

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GFAP ENSCPOG00000020899 (Guinea pig)

Gene Details

glial fibrillary acidic protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019373, Guinea pig)

Protein Percentage 85.65%
CDS Percentage 86.42%
Ka/Ks Ratio 0.0822 (Ka = 0.0714, Ks = 0.869)

GFAP ENSG00000131095 (Human)

Gene Details

glial fibrillary acidic protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000468500, Human)

Protein Percentage 77.26%
CDS Percentage 79.27%
Ka/Ks Ratio 0.10932 (Ka = 0.1445, Ks = 1.3216)

Gfap ENSMUSG00000020932 (Mouse)

Gene Details

glial fibrillary acidic protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064691, Mouse)

Protein Percentage 83.45%
CDS Percentage 82.21%
Ka/Ks Ratio 0.05777 (Ka = 0.0832, Ks = 1.4393)

Gfap ENSRNOG00000002919 (Rat)

Gene Details

glial fibrillary acidic protein (Gfap), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032389, Rat)

Protein Percentage 83.49%
CDS Percentage 81.94%
Ka/Ks Ratio 0.04778 (Ka = 0.0807, Ks = 1.689)

Genome Location

Sequence Coding sequence

Length: 1299 bp    Location: 394433..401231   Strand: +
>XM_004859189.1
ATGGAGCGCAGACTCGTGTCCTCTGTCCGTCGCTCCTATGCTTCCTCCTCCTCGGAGACAGTGGCTAGGGGCCTGCGGGCCGTGCGCCGCCTGGGTCCAGACCCCCGCCCTGCCCCGGCCTGGGTGTCCCCTCCGCTCCCGGCCCGGCTGGACTTCTCGCTGGCTGGGGCTCTCAACACTGGCTTCAAGCAGACACGGGCCAGCGAGCGGGCCCAGATGATGGAGCTCAATGACCGGTTTGCCAGCTACATCGAAAAGGTCCGGTTCCTGGAGCAGCAGAACAAGGCCCTGGCTGCTGAGCTGAACCAGCTGCGGGCTGCAGAGCCCACCCGGCTGGCCGACGTCTACCAGGCCGAGCTCCAGGAGCTGCGGCTGCGGCTGGACCAGCTCATGGCAGGCAGCGCCCGGGTGGAGGTGGAGCGCGACAACCTGGCCCTGGACCTGGGCGCCCTGCAGCAGAAGCTCCAGGATGAAGCCACCCTGAGGCTGCAGGCCGAGAACAGCCTGGCCAGCTACAGACAGGAGGCCGACGACGCCACCCTGGCCCATCTGGACCTGGAGAGGAAAATCGAGTCTCTGGAGGAGGAGATCCGGTTCCTGGGGAAGATCCATGAGGAGGAGGTTCGGGAGCTCCAGGAGCAGCTGGCCAAGCAGCAGGTCCACGTGGAGATGGACGTGGCTAAGCCCGACCTCACGGCGGCCCTGAGGGAGATCCGCACGCAGTATGCGGCCGCGGCCTCCAGTAACATGCAGGAGGCAGAGGAGTGGTACCGCTCCAAGTTCACCGACCTCACGGACGCCGCTGCCCGAAATGCTGAGCTGCTGCGCCAGGCCAAGCATGAGGCCAGCGACTACCGGCGCCAGCTGCAGGCCCTGACCTGTGACCTGGAGTCCCTTCGGGGCACGAACGAGTCCCTAGAGCGGCAGATGCGCGAGCAGGAGGAGCGCCACTCGAGAGAGGCTTCCACCTACCAGGAGGCGCTGGCCCGGCTGGAGGAGGAAGGCCGGGGCCTCAAGGAGCAGATGGCCCGGCACCTGCAGGAGTACCAGGAGCTGCTCAACGTCAAGCTGGCCCTGGACATGGAGATTGCCACCTACCGGAAGCTGCTGGAGGGCGAGGAGAACCGCATCACCATTCCCGTGCAGACTTTCTCCAACCTGCAGATCCGAGAGACCAGCGTGGACACGAAGTCCGTGTTGGAAGGCCACCTCAGGAGGAACATCGTGCTCAAGACAGTGGAGATGCGTGACGGGGAGGTCACTCAGGAGTCCAAGCAGGAGCACAAGGACGCCATGTGA

Related Sequences

XP_004859246.1 Protein

Gfap PREDICTED: glial fibrillary acidic protein isoform X3 [Heterocephalus glaber]

Length: 432 aa      View alignments
>XP_004859246.1
MERRLVSSVRRSYASSSSETVARGLRAVRRLGPDPRPAPAWVSPPLPARLDFSLAGALNTGFKQTRASERAQMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAAEPTRLADVYQAELQELRLRLDQLMAGSARVEVERDNLALDLGALQQKLQDEATLRLQAENSLASYRQEADDATLAHLDLERKIESLEEEIRFLGKIHEEEVRELQEQLAKQQVHVEMDVAKPDLTAALREIRTQYAAAASSNMQEAEEWYRSKFTDLTDAAARNAELLRQAKHEASDYRRQLQALTCDLESLRGTNESLERQMREQEERHSREASTYQEALARLEEEGRGLKEQMARHLQEYQELLNVKLALDMEIATYRKLLEGEENRITIPVQTFSNLQIRETSVDTKSVLEGHLRRNIVLKTVEMRDGEVTQESKQEHKDAM