Sequence details NCBI ID: XM_004859170.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Plekhm1
Gene Name pleckstrin homology domain containing, family M (with RUN domain) member 1, transcript variant X1
Entrez Gene ID 101701904

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PLEKHM1 ENSCPOG00000011348 (Guinea pig)

Gene Details

pleckstrin homology domain containing, family M (with RUN domain) member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010204, Guinea pig)

Protein Percentage 83.49%
CDS Percentage 87.3%
Ka/Ks Ratio 0.25326 (Ka = 0.0906, Ks = 0.3578)

PLEKHM1 ENSG00000225190 (Human)

Gene Details

pleckstrin homology domain containing, family M (with RUN domain) member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000389913, Human)

Protein Percentage 81.26%
CDS Percentage 83.0%
Ka/Ks Ratio 0.14733 (Ka = 0.1043, Ks = 0.708)

Plekhm1 ENSMUSG00000034247 (Mouse)

Gene Details

pleckstrin homology domain containing, family M (with RUN domain) member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047327, Mouse)

Protein Percentage 81.1%
CDS Percentage 81.1%
Ka/Ks Ratio 0.13349 (Ka = 0.1086, Ks = 0.8135)

Plekhm1 ENSRNOG00000028521 (Rat)

Gene Details

pleckstrin homology domain containing, family M (with RUN domain) member 1 (Plekhm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034752, Rat)

Protein Percentage 82.0%
CDS Percentage 81.65%
Ka/Ks Ratio 0.13135 (Ka = 0.1037, Ks = 0.7898)

Genome Location

Sequence Coding sequence

Length: 3177 bp    Location: 37080..86568   Strand: +
Raw sequence   
>XM_004859170.1
ATGCTCTCAGTGGTCGAAAATGGACTGGACCCCCGGGCCACTATCCCGGTCATCAAGAAGAAGCTGGTGGGGTCTGTGAAGGCGCTGCAGAAGCAGTACATGTCCCTGGACGCGGTGGTCACGAGTGAAGATGGAGATGCCAACACCATGTGCAGTGCCCTGGAGGCTGTGCTTATCCATGGCCTGCAGGCCAAGCACATCCATGCAGAGACCGGAGGAAAGCGGAAGAAAAGTGCGCGTCAGAAGCCTCTGCCTCAGCCTGTCTTTTGGCCCCTCCTGAAAGCTGTCACCCACAAACACATCATCTTGGACCTAGAGCGCCTGGCCTTCATCAACACGGACGTGGGCCGCTGCCGGGCCTGGCTGCGGCTGGCCCTCAATGACGGCCTGATGGAGTGCTACCTGAAGCTGCTGCTCCAGGAGCAGGCGAGGCTATGCCAGTACTACCAGCCCAGCGCACTGCTGCGGGACGCCGAGGAGGGCGAGTTCCTCCTGAGCTTCCTGCAGGGACTCACGTCCTTGTCCTTCGAGCTCTCTTACAAGTCCGCTGTCCTGAATGAGTGGACGATCACCCCACTGGCCCTCGCTGGGCTTTGTCCACTCTCAGAACTCGACCCCTTCCCTACCTCTAGTGCAGAACTCCAGCGTGAGGAGTCTCTGGACTCCATTTCCCACTCCTCAGGCTCAGAGGATATCGAAGTCCAGCACTCGGGCCATAAGATCCGACGGAACAGGAAGCTCACAGCCTCCTCACTCAGCCTGGACACAGCCAGCTCCTCACAGCTGTCCTGCAGCCTGAACTCTGATAGCTGCCTGCTCCAGGAGAGTGGCTGCAAGAGTCCAGACCACCCCGAGGAGCCCATGTCCTACGACTTGGATCTGGGAACAGCAAATGCTGATGATTCCAAGCAGTCCCTGCAAGAGGTGTTGTCGGAATTCAGCAAAGCCCAGGTAAACTCTGTGCCAACCCGCGGACCAAGCCAAGAGTCAGAGATGCCTATGTTCCAGGCCCCACTGTCCCTCCACGGCCTGGCCACCAGCACACACCTGCTCTCAGACGTGCCTGGGGAGCCCCTTCCTGCCCGTGCATCCTCTGAGACCCCAGACAGTGACCACGAGCGGGAGCCGCTGCCCCAGGCACCCAGCACCCTACGTGTGCAGCAGCCGGTCACTGCCCAAGCCTGCCCTGCAGGGAGCACTTCCGGTCAGCCTGCTGGGCCTGCCAGAGAGGCGAGTGGAGCTGTCAGCCAAGGGAGCGGTCTGCAGAAGGCCCTGGAGAATGGCAGAGTGGGGCTGAAGCTTGTGGTTTCCTCCCCCACCAGTCCGAAAAGCCAGAGCTGGATCTCCGAGGAGGACTTCTATCGGCCTCCCCAGGAGCCCGCTCCCAGCAGCGCTGCAGCTGCTCCTAGAGGATGCCCGGAGCCAAGGACTGCTCTCCACTGGCACCGCTCCCAAGGAGCAAGAAAGAGCTGCCCCCTGGGAGCCCTGAGTGAGACGTGCATGTCTTCCCCAGGACATGGGGGTGCCAGGGAGGCCCCGGAGGAGCACAAGAGCTTCTGGGTGGTGCACCGGCGCCAGATGGGGCTGTCCAACCCGTTCCGGGGCCTCCTAAAGCTGGGCACAGTGTCACGGCGGGGGGCCATGGGCATCTGGAAGGAGCTCTTCTGCGAGCTGTCTCCGCTGGAGCTCCGCCTCTACCTGAGCGCCGAGGAGCGCGCCTGCGTGGAGAGCTGCTCCCTGCTGCGCTGCGAGGCGGTGGGTCCGGCCCACAGCGACGGCCGCTTCGAGCTGGTCTTCGCCAGCAAGAAGCTGGCCCTGCGGGCCTCCTCCCAAGATGAGGCTGAGGACTGGCTGGAGCGGGTGCGGGAGGCCCTGCAGAAGGTCCGGCCGCAGCAGGAGCACGAGTGGGTGGACGTCCAGTACCCGGATCAGCCCGAAGAGCCCCCCGAGGTCCCTCCTGGCGGCCACCCCTCTGGCTCAGCTCTGTGCCCAGAGCCGGCCATGCCCCAGAGCAGGCGGAGTCACTGGACACCGGCCCAGGTTCCGGAGCCAGACGCCATCAAAGAGTCACTTCTGTACCTGTATGCAGACGGGACCTGGGTGCCCTGTATTTTCTCCCTGTCCGTGGAATCTCTGAAATGCTTCCGCGTGAGGAATAATGAGAAGATGCTGAGTGACAGCCATGGAGTGGAGGCCATACGAGACATCCTGCCCGACACGAGCCTCGGGGGTCCGGCCTTCTTCAAAATCATCACAGCCAAGGCCGTCCTGAAGCTGCAGGCTGGGAACGCCGAGGAGGCCGCCCTGTGGAGGGGCCTAGTACGCGAGGTCCTGGCCTCCTACTTGGAGGCGGCTGAGGACGCCGAGACACTTGCTGGGAGTCTGGACGAAAACTGTCAGGAGGGGCTGACGCCCGCCGCCCAGGAGAACGGGCTCCTCCTGCAGCACCTGGTGGCCGTCCCCACGGAGAAAGGCCTGGACTCCCAGGGTTGCTTCTGTGCAGGCTGCTCCCGGCAGATTGGCTTCTCCTTTGTACGACCCAAGCTCTGTGCCTTCTCTGGCCTCTATTACTGTGACAGCTGCCACCAGGACGATGCCTCAGTGATTCCAGCCAGGATCATCCACAACTGGGACCTCACTAAGCGCCCGGTCTCCCGGCAGGCCCTGCGGTTCCTGGCGCAGATCCAGGCACAGCCCCTCGTCAACCTGCAGCTGGTGAACCCCTCGCTGTACGAGCACGTGGAGCAGGTGCACCTCATTGGCCGGAGCCGCGAGCGGCTGAAGCTCCTGGGGGATTACCTGGGCCTGTGTCGCAGCGGAGCCCTCAAAGAGCTGAGCAAGAGGCTTGGCCACAGGCATTATCTCCTGGAGTCTCCCCACAAGTTCAGTGTCGCTGACCTGCAGCAGATTGCAGAGGGGGAGTACGAAGGCTTCCTCAAGGCCCTCATCGAGTCCGCCTCCCAGCACGTCTACCACTGCGACCTGTGCACCCAGCGGGGCTTCATCTGCCAGATCTGCCACCACCACGACATCATCTTCCCCTTCGAGTTTGACACCACGGTCAGGTGTGCTGAGTGCAAGACAGTCTTCCACCAGAGCTGCCAGGCTGTGGTGAAGAAGGGCTGCCCCCGCTGCGCCCGCCGGCGCAAGTACCAGGAGCAAAACAGCCTCTCCTAA

Related Sequences

XP_004859227.1 Protein

Plekhm1 PREDICTED: pleckstrin homology domain-containing family M member 1 isoform X1 [Heterocephalus glaber]

Length: 1058 aa      View alignments
>XP_004859227.1
MLSVVENGLDPRATIPVIKKKLVGSVKALQKQYMSLDAVVTSEDGDANTMCSALEAVLIHGLQAKHIHAETGGKRKKSARQKPLPQPVFWPLLKAVTHKHIILDLERLAFINTDVGRCRAWLRLALNDGLMECYLKLLLQEQARLCQYYQPSALLRDAEEGEFLLSFLQGLTSLSFELSYKSAVLNEWTITPLALAGLCPLSELDPFPTSSAELQREESLDSISHSSGSEDIEVQHSGHKIRRNRKLTASSLSLDTASSSQLSCSLNSDSCLLQESGCKSPDHPEEPMSYDLDLGTANADDSKQSLQEVLSEFSKAQVNSVPTRGPSQESEMPMFQAPLSLHGLATSTHLLSDVPGEPLPARASSETPDSDHEREPLPQAPSTLRVQQPVTAQACPAGSTSGQPAGPAREASGAVSQGSGLQKALENGRVGLKLVVSSPTSPKSQSWISEEDFYRPPQEPAPSSAAAAPRGCPEPRTALHWHRSQGARKSCPLGALSETCMSSPGHGGAREAPEEHKSFWVVHRRQMGLSNPFRGLLKLGTVSRRGAMGIWKELFCELSPLELRLYLSAEERACVESCSLLRCEAVGPAHSDGRFELVFASKKLALRASSQDEAEDWLERVREALQKVRPQQEHEWVDVQYPDQPEEPPEVPPGGHPSGSALCPEPAMPQSRRSHWTPAQVPEPDAIKESLLYLYADGTWVPCIFSLSVESLKCFRVRNNEKMLSDSHGVEAIRDILPDTSLGGPAFFKIITAKAVLKLQAGNAEEAALWRGLVREVLASYLEAAEDAETLAGSLDENCQEGLTPAAQENGLLLQHLVAVPTEKGLDSQGCFCAGCSRQIGFSFVRPKLCAFSGLYYCDSCHQDDASVIPARIIHNWDLTKRPVSRQALRFLAQIQAQPLVNLQLVNPSLYEHVEQVHLIGRSRERLKLLGDYLGLCRSGALKELSKRLGHRHYLLESPHKFSVADLQQIAEGEYEGFLKALIESASQHVYHCDLCTQRGFICQICHHHDIIFPFEFDTTVRCAECKTVFHQSCQAVVKKGCPRCARRRKYQEQNSLS