Details from NCBI annotation

Gene Symbol Capn12
Gene Name calpain 12
Entrez Gene ID 101711593

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPN12 ENSCPOG00000014228 (Guinea pig)

Gene Details

calpain 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012818, Guinea pig)

Protein Percentage 81.2%
CDS Percentage 83.41%
Ka/Ks Ratio 0.24625 (Ka = 0.1277, Ks = 0.5187)

CAPN12 ENSG00000182472 (Human)

Gene Details

calpain 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000331636, Human)

Protein Percentage 86.23%
CDS Percentage 86.69%
Ka/Ks Ratio 0.12138 (Ka = 0.0721, Ks = 0.5936)

Capn12 ENSMUSG00000054083 (Mouse)

Gene Details

calpain 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069055, Mouse)

Protein Percentage 87.5%
CDS Percentage 84.81%
Ka/Ks Ratio 0.08706 (Ka = 0.0661, Ks = 0.7589)

Capn12 ENSRNOG00000020389 (Rat)

Gene Details

calpain 12 (Capn12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027645, Rat)

Protein Percentage 87.9%
CDS Percentage 84.7%
Ka/Ks Ratio 0.07893 (Ka = 0.0641, Ks = 0.8121)

Genome Location

Sequence Coding sequence

Length: 2172 bp    Location: 12124499..12114094   Strand: -
>XM_004859062.1
ATGGCGTGCAGGGACGGGAAGGTCACAATCCAACTGGTGGATGAAGATGCAGGCACAGGAGCCCGGGACCCAGAGCCCTTTCGGGGCCAGAGCTATGAGGCAATCAGAGCAGCCTGCCTGGATTCAGGGATCCTGTTCCGCGACCCCTACTTCCCTGCTGGACCTGATGCCCTTGGCTATGATCGGCTGGGCCCGAACTCCGAGAAGGCTAAAGGGGTGGAATGGAAGAGGCCCAGAGAGTTTTGTACCGAGCCTCAGTTCATCTGCGAGGACATGAGCAGGACAGACGTGTGTCAGGGGAGACTGGGGAACTGCTGGTTCCTTGCCGCTGCTGCCTCCCTCACTCTGTACCCCCGCCTCCTGTACCGGGTGGTCCCCCCTGGACAGAGCTTCCAAGATGGCTACACAGGTGTCTTCCACTTCCAGCTCTGGCAGTTCGGCCGCTGGGTGGATGTCGTGGTGGATGACAGGCTGCCGGTGCGCGAGGGGAAGCTGATGTTTGTGCACTCGGAGCAGCGGGACGAGTTCTGGGCCCCGCTCCTAGAGAAGGCCTATGCCAAGCTCCATGGTTCCTACGAGGTAATGAGAGGCGGCCACATGAACGAGGCTTTCGTGGACTTCACAGGCGGCGTGGGCGAGGTGCTCTACCTGAGAGGCAACACGCCGGGCCTCTTCTCTGTCGTCCGCCATGCCCTGGCCAAGGAGTCCCTAGTGGGCGCCACTGCCCTGAGTGACCGGGGCGAGTACCGTACAGAAGAGGGGCTGGTGAAAGGACATGCGTATTCAGTCACAGGCACACACAAGGTGTCCCTGGGTTTCACCAAGGTGCGGCTGCTGAGGCTGCGGAACCCATGGGGCCGCGTGGAGTGGACGGGGCCCTGGAGTGACAGGTGCCCATGCTGGGATGCGCTGCCCCTGGAGTGGCAAGAAGCCCTACTGGTGAGGAAGGAGGATGGTGAGTTCTGGATGGAGCTGCAGGATTTCCTCCAGCACTTCAACACCATCCAGATCTGCTCCCTGAGCCCCGAGGTGCTAGGCCCCAATCCGGCTGGGGCCGGCTGGCACATCCACACCTTCCAGGGCCGGTGGGTTCGTGGCTTCAACTCTGGCGGGAGCCAGCCCAGTGCTGAAACCTTCTGGACCAATCCCCAGTTCCGGCTCACGCTGCTGGAGCCTGATGAGGAGGAGGAGGAGGATGACGACGAGGACGAAGGGGGGCCCTGGGGAGGCTGGGGGGCAGCAGGGGCGAGGGGCCCTGCGAGAGGGGGCCGTACCCCCAAATGCACAGTCCTCTTGTCGCTCATCCAGCGCAACCAGCGGTGCCTGAGGGCCAAGGGCCTCACTTACCTCACTGTGGGCTTCCACGTGTTCCAGATTCCGGAGGAGCTGCTGGGCCTCTGGGATTCGCCGCACAGCCGCGAGCTCCTGTCCGGGCTGCTGCGCGCCGATCGCTCGGTCTTCTGCGCTCGCCGCGACGTGAGCCGCCGCTGCCGCCTGCGCCCCGGCCACTACCTCGTGGTGCCCAGCGCCTCCCGCGTCGGCGACGAGGCCGACTTCACGCTGCGCATTTTCTCTGAGCGCAGCCACACTGCAGTGGAGATCGATGACGTGATCAGCGCTGACCTGCAGACCCTCATGGTCCCCTCCAAGCCTCTGGAGCTGGAGTTGGTGCAGCTGTTTCTGGAGCTGGCTGGGGAGGAGGAAGAACTCAATGCCTATCAGCTCCAGACCTTGCTAAGCATTGCCCTGCAGCCAGCCAGGGGCAACACTAGGAACTCTGGGGAGATTGGGCTCAGGACCTGTGAGCAGCTGCTGCAGTGTTTTGGGAATGGGCAAAGCCTGGCCCTGCACCACTTCCAGCAGCTCTGGGGCCACCTCCTGATGTGGCAGGCCAGATTTGACAAGTTTGATGAGGACACCTCTGGGACCATGAACTCCTACGAGCTTCGGCTGGCACTGAATGCCGCAGGCTTCCACCTGAACAACCAGCTGACCCAGGCCCTCACCAGCCGCTACCGGGACAGCCGGCTTCGTGTGGACTTTGAGCACTTCGTGTCCTGCGTGGCCCAGCTTACCTGCATCTTTCGTCACTGCAGCCAGCACCTGCACGGGGGCGAGGGGGTCATCTGCCTGACACACAGACAGTGGACGGAGGTGGCCACCTTCTCCTAG

Related Sequences

XP_004859119.1 Protein

Capn12 PREDICTED: calpain-12 [Heterocephalus glaber]

Length: 723 aa      View alignments
>XP_004859119.1
MACRDGKVTIQLVDEDAGTGARDPEPFRGQSYEAIRAACLDSGILFRDPYFPAGPDALGYDRLGPNSEKAKGVEWKRPREFCTEPQFICEDMSRTDVCQGRLGNCWFLAAAASLTLYPRLLYRVVPPGQSFQDGYTGVFHFQLWQFGRWVDVVVDDRLPVREGKLMFVHSEQRDEFWAPLLEKAYAKLHGSYEVMRGGHMNEAFVDFTGGVGEVLYLRGNTPGLFSVVRHALAKESLVGATALSDRGEYRTEEGLVKGHAYSVTGTHKVSLGFTKVRLLRLRNPWGRVEWTGPWSDRCPCWDALPLEWQEALLVRKEDGEFWMELQDFLQHFNTIQICSLSPEVLGPNPAGAGWHIHTFQGRWVRGFNSGGSQPSAETFWTNPQFRLTLLEPDEEEEEDDDEDEGGPWGGWGAAGARGPARGGRTPKCTVLLSLIQRNQRCLRAKGLTYLTVGFHVFQIPEELLGLWDSPHSRELLSGLLRADRSVFCARRDVSRRCRLRPGHYLVVPSASRVGDEADFTLRIFSERSHTAVEIDDVISADLQTLMVPSKPLELELVQLFLELAGEEEELNAYQLQTLLSIALQPARGNTRNSGEIGLRTCEQLLQCFGNGQSLALHHFQQLWGHLLMWQARFDKFDEDTSGTMNSYELRLALNAAGFHLNNQLTQALTSRYRDSRLRVDFEHFVSCVAQLTCIFRHCSQHLHGGEGVICLTHRQWTEVATFS