Details from NCBI annotation

Gene Symbol Capns1
Gene Name calpain, small subunit 1, transcript variant X3
Entrez Gene ID 101714330

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPNS1 ENSCPOG00000000115 (Guinea pig)

Gene Details

calpain, small subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000102, Guinea pig)

Protein Percentage 91.77%
CDS Percentage 92.59%
Ka/Ks Ratio 0.19393 (Ka = 0.0446, Ks = 0.2297)

CAPNS1 ENSG00000126247 (Human)

Gene Details

calpain, small subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000246533, Human)

Protein Percentage 92.4%
CDS Percentage 87.96%
Ka/Ks Ratio 0.07111 (Ka = 0.0418, Ks = 0.5884)

Capns1 ENSMUSG00000001794 (Mouse)

Gene Details

calpain, small subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001845, Mouse)

Protein Percentage 89.35%
CDS Percentage 84.16%
Ka/Ks Ratio 0.0761 (Ka = 0.0615, Ks = 0.8081)

Genome Location

Sequence Coding sequence

Length: 795 bp    Location: 10383436..10390157   Strand: +
>XM_004858977.1
ATGTTCCTGGTTAACTCGTTCTTGAAGGGCGGCGGCGGCGGAGGAGGCGGCGGGGGCCTGGGTGGGGGACTGGGGGACGTCATCGGAGGCTTCCTCGGCGGGGGCGGCGGGGGCGGCGGAGGCGGCGGCGGAGGTGGTGGTGGCGGCGGTGGCACAGCCATGCGCATCCTGGGCGGAGTCATTAGCGCCATCAGCGAGGCAGCTGCGCAGTACAACCCAGAGCCCCCGCCCCCGAGAACCCATTTTTCCAACATCGAGGCCAACGAGAGTGAGGAGGTCCGGCAGTTCCGGCGACTCTTTACCCAGCTGGCTGGAGATGACATGGAGGTCAGTGCCACAGAACTCATGAACATTCTCAACAAAGTTGTGACCCGACACCCTGATCTAAAAACCGATGGTTTTGCCCTGGACACGTGTCGAAGCATGGTGGCTGTGATGGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGAGTTCAAGTACTTGTGGAACAATATCAAAAAGTGGCAGGCCATATACAAACGGTTTGACATTGACCGATCTGGGACCATCTGCAGCAGTGAACTCCCAGGGGCCTTTGAGGCAGCAGGGTTCCACCTGAATGAACATCTCTATAACATGATCATCCGGCGCTACTCTGACGAGGGAGGGAACATGGACTTCGACAACTTCATCAGCTGCTTGGTCAGGCTGGATGCCATGTTCCGTGCCTTCAAATCTCTTGATAAAGATGGCACAGGACAAATCCAGGTGAACATCCAAGAGGTAAGAAACCCCATCCTCAGGTGTGGGTGA

Related Sequences

XP_004859034.1 Protein

Capns1 PREDICTED: calpain small subunit 1 isoform X3 [Heterocephalus glaber]

Length: 264 aa     
>XP_004859034.1
MFLVNSFLKGGGGGGGGGGLGGGLGDVIGGFLGGGGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPPPRTHFSNIEANESEEVRQFRRLFTQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFALDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKRFDIDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEVRNPILRCG