Details from NCBI annotation

Gene Symbol Nphs1
Gene Name nephrosis 1, congenital, Finnish type (nephrin), transcript variant X1
Entrez Gene ID 101705086

Database interlinks

Part of NW_004624794.1 (Scaffold)

For more information consult the page for NW_004624794.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NPHS1 ENSCPOG00000006685 (Guinea pig)

Gene Details

nephrosis 1, congenital, Finnish type (nephrin)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006022, Guinea pig)

Protein Percentage 88.97%
CDS Percentage 90.94%
Ka/Ks Ratio 0.26756 (Ka = 0.0578, Ks = 0.2161)

NPHS1 ENSG00000161270 (Human)

Gene Details

nephrosis 1, congenital, Finnish type (nephrin)

External Links

Gene Match (Ensembl Protein ID: ENSP00000368190, Human)

Protein Percentage 84.53%
CDS Percentage 84.85%
Ka/Ks Ratio 0.17029 (Ka = 0.0858, Ks = 0.5038)

Nphs1 ENSMUSG00000006649 (Mouse)

Gene Details

nephrosis 1 homolog, nephrin (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000006825, Mouse)

Protein Percentage 82.14%
CDS Percentage 82.8%
Ka/Ks Ratio 0.19642 (Ka = 0.1065, Ks = 0.5423)

Nphs1 ENSRNOG00000020873 (Rat)

Gene Details

nephrosis 1, congenital, Finnish type (nephrin) (Nphs1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049922, Rat)

Protein Percentage 81.47%
CDS Percentage 82.24%
Ka/Ks Ratio 0.18782 (Ka = 0.1088, Ks = 0.5793)

Genome Location

Sequence Coding sequence

Length: 3810 bp    Location: 10135963..10117802   Strand: -
>XM_004858945.1
ATGAAGGACCCACAGACAGACAGTGGCAGAAGCAGGTGGCAGATAATGGATGCTGTGACGCCCATGGTCAGAGGCACTGGAACAGCCCTGAGGATCCCCATCAGGGCTTCCCTGCTGTTCATGGGGCTGCTGATCACAGGTATGGCCCAGTCGCCAATCTCTGACTCAGTCTCTCGAGGCTTCTGGGCCCTACCTGAAAACCTGACGGCAGTAGAGGGAGCCACGGTGGAGCTGAAGTGTGGCGTCAGTGCACCTGGCAGTGCTGTACAGTGGGCCAAGGATGGCCTGCTGTTAGGCCCCAGCCCAGGGATCCCAGGCTTCCCAAGATACCGCATGGAAGGAGATCCTGCTAGAGGTGAATTCCACCTGCGCATTGAAACATGTGACCTCAGCGATGACGCAGAGTATGAGTGCCAGGTTGGCCGCTCAGAGACAGGCCCTGAACTCGTGTCTCCCAGAGTGATCCTCTCCATCCTGGTTCCGCCCAAGGTGCTTCAGCTGACCCCTGAGGCAGGGACCACAGTCACCTGGGTAGCTGGGCAGGAGTATGAGATCAGCTGTGTGTCTGGGGATGCAAAGCCAGCACCTGACATCGCCTTCCTCCAGAGTGGACAAACAGTATCTAGCATCTCTGTCGACGTGAGCGAAGGGTCCCAGGAGAAACTCTTCATCACAGAGGCCACAGCCAGGGTGACACCTCAGAGCTCGGATAATGGGAAGTTACTAATCTGCGAGGGGTACAGTCCAGCTTTGGTCAGCCCCATCAAGGCCTCAATCACCATGAATGTTTTGTTTCCCCCAGGACCTCCTGTCATCGAATGGCCAGGCCTAAACGAGGGGCTCGTTAGAGCAGGGCAGAACTTGGAGCTCCCATGCACAGCCCGAGGGGGAAACCCACCAGCCACACTGCAGTGGCTGAAGAATGGCCAACCTGTGCCCATAGCGTGGGGGACAGAGCTCACCCACGCCACGGCCCGAAGTGTACTCACAATGACTGTGCGGCCAGAAGACCATGGAGCTCGAATCAGCTGTGAAGCCTACAACAGTGTATCTGTAGGGACCCAGGAACGAAGTATCACCCTGCAGGTCACCTTTCCTCCCAGTGCCGTAACCATCTTGGGATCTGTATCACAGTCTGAGAACAAGAATGTGACTCTCTGCTGCCTCACAAAGTCTAGTCGCCCGAGGGTCCTGTTGCGCTGGTGGCTGGGTGGGCGGCAGCTGCAGCCCACGGAGGAGACAGTCATGGATGGCCTGCATGGTGGTCACATCTCCATGTCCAATCTAACCTTGCTGGTGCGTCGGGAAGACAATGGCCTGACCCTCACCTGTGAAGCCTTCAGTGAGGCCTTCACCAAGGAGACCTTCAAGAAGTCTCTTACCTTGAATGTGAAATATCCTGCCCAGAAGCTGTGGATTGAGGGACCCCAAGAGGGGCAGCACTTCCGGACTGGGACCCGGGTGAGGCTGGTGTGTTTGGCCATCGGGGGAAATCCAGACCCCTCCCTCACCTGGTACAAGGACTCGCGCACCGTGATGGAGCCGCGGCCGGCCCAGGAGCCACGGCGGGTGCAGCTGGGAAATCTGGAGAAGTCCGGGAGCACCTTCTCCCGCGAGCTGGTGCTGGTCCTAGGCCCTCCGGACAACAAGGCCAAGTTCTCTTGCAAGGCGGGCCAGCTGAGCGCGTCCACGCAGATAGTGGTGCTGTTTCCCCCAACCAACTTGACGATCCTGGCCAACGTGTCAGTACTGCGTCCCGGGGACCCCTTAAATTTAACGTGCGTTAGCGTGAGCAGCAACCCCCCTGTCAACTTGTCCTGGGACAAGGAGGGGGAGAGGCTGGAAGACATGGCCGCACCGCCTCAGAACGCCCCGTTCAAAGGCTCTCCTGCCTCCAGGAGCGTTTTTCTGCGGGTGTCATCCCGCGATCACGGCCACCGCGTGACCTGCCGAGCCCACAGCGCAGAGCTCCGCGAAACCGTGAGCTCCTTCTACCGCTTCAACGTGCTATACCCCCCGGAGTTCCTGGGGGAGCAAGTGCTGGTGGTGACCGCAGTGGAGCAAGGCGAGGCACTGCTGCCTGTGTCCGTGTCCGCTAACCCCGCGCCTGAGGCGTTCAACTGGACCTTCCGTGGCTATCGCCTCAGCCCAGCTGGCGGCCCCCGGCATCGCATCCTGTCCAACGGGGCTCTGCAGCTATGGAATGTGACCCGCTCTGACGATGGCCTCTATCAGCTCCACTGCCAGAACGCGGAGGGCACTGCGGAAGCGCTGGTGCGGCTGGATGTGCACTATGCTCCCACCATCCGTGCCCTCCAGGACCCTACTGAAGTGGATGTTGGGGGTTCTGTGGACATAGTTTGCACCGCTGATGCCAATCCCATCCTCCCAAACATGTTCAACTGGGAGAGGCTGGGGGAAGATGAGGAAGACAAGAGCCTGGATGACACAGAGACAATGTCAAAGGGGTCCACAGGGCGTCTGAGGATTCACCATGCCAAACTGGCCCAGGCAGGTGCTTACCAGTGCATTGTGGACAATGGCGTGGCACCTCCAGCCCGAGGCCTGGTCCGTCTTGTGGTCAGATTTGCCCCCCAGGTGGAGCATCCCACTCCCCTAACTAAAGTGGCTGCAGCTGGGGACAGCACCAGTTCTGCCACCCTCCACTGCCGTGCTCGGGGTGTCCCCAACATTGTCTTCACTTGGACCAAAAATGGAGTCCCTCTGGACCTCGAAGATCCCAGGTACACTGAGCACACATACCACCAGGGTGGAGTCCATAGCAGTCTCTTGACCATTGCGAATGTGTCTGCAGCCCAGGATTATGCCCTCTTCACATGCACAGCCACCAACCTCCTTGGCTCGGACCACACCAACATTCAGCTCGTCAGCATTAGCCGCCCTGACCCACCACTGGGATTGAAGGTTGTGAGCCTGACTCCCCACTCAGTGGGACTAGAGTGGAAGCATGGTTTTGATGGGGGTTTGCCACAGAGGTTCCACATCAGGTATGAGGCACTGGAGACTCCTGGGTTTTTCTACGTGGATGTCCTACCACCTCAGGCCACCACCTTCACACTGACCGGGCTGCAGCCTTCCACACGATACAGGGTCTGGCTGCTGGCTAGCAATGCCTTGGGAGACAGTGGATTAGCTGCTGAGGGGACCCAGCTCTCCATCACCACCCCAGGCCTGGACCAGCCTTCTGGAGAACCTGATGACCAGCTGCCTACAGAGCACCCTGCAGAACCCCCAGGACTGCCCCTGCTGCCTGTGCTGTTTGCAGTTGGGGGTCTTCTGCTGCTCTCCAATGCCTCATGTGTTGGGGTTTTCCTCTGGTGGCGAAAACTGAGGCATCTTGCTGAGGGTATCTCAGAGAAGACAGAAGCAGTGTCGGCGGAGGACCAAGTCAGGAATGAATATGAGGAGAGCCAGTGGACTGGGGACCAGGACACTCGAAGTTCCACGGTTAGCACAACAGAAATAGAGCCATATTACCACTCCTTGAGGGACTTCAGCCCCCAGCTGCCCCCCACACTGGAGGAAGTGGATTATACCCAAGGCTTCACAGGTTTTGAAGAGGAGGATGTGGCCTTTCCTGAGCACCTGTATGATGAGGTGGAGAGAATGTATGCCCCACCAGGAGCCTGGGGACCCCCTTATGATGAAGTGCACATGGGCTCCTATGACCTCCACTGGGCTGAGGACAAGTATGAAGGTCCAGGAAGAATCTATGACCAGGTGGCAGGAGATTCAGGCCCTCTGGAATCAGATTCTCTTCCCTTTGAGCTAAGGGGAGATCTGGTGTGA

Related Sequences

XP_004859002.1 Protein

Nphs1 PREDICTED: nephrin isoform X1 [Heterocephalus glaber]

Length: 1269 aa      View alignments
>XP_004859002.1
MKDPQTDSGRSRWQIMDAVTPMVRGTGTALRIPIRASLLFMGLLITGMAQSPISDSVSRGFWALPENLTAVEGATVELKCGVSAPGSAVQWAKDGLLLGPSPGIPGFPRYRMEGDPARGEFHLRIETCDLSDDAEYECQVGRSETGPELVSPRVILSILVPPKVLQLTPEAGTTVTWVAGQEYEISCVSGDAKPAPDIAFLQSGQTVSSISVDVSEGSQEKLFITEATARVTPQSSDNGKLLICEGYSPALVSPIKASITMNVLFPPGPPVIEWPGLNEGLVRAGQNLELPCTARGGNPPATLQWLKNGQPVPIAWGTELTHATARSVLTMTVRPEDHGARISCEAYNSVSVGTQERSITLQVTFPPSAVTILGSVSQSENKNVTLCCLTKSSRPRVLLRWWLGGRQLQPTEETVMDGLHGGHISMSNLTLLVRREDNGLTLTCEAFSEAFTKETFKKSLTLNVKYPAQKLWIEGPQEGQHFRTGTRVRLVCLAIGGNPDPSLTWYKDSRTVMEPRPAQEPRRVQLGNLEKSGSTFSRELVLVLGPPDNKAKFSCKAGQLSASTQIVVLFPPTNLTILANVSVLRPGDPLNLTCVSVSSNPPVNLSWDKEGERLEDMAAPPQNAPFKGSPASRSVFLRVSSRDHGHRVTCRAHSAELRETVSSFYRFNVLYPPEFLGEQVLVVTAVEQGEALLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILSNGALQLWNVTRSDDGLYQLHCQNAEGTAEALVRLDVHYAPTIRALQDPTEVDVGGSVDIVCTADANPILPNMFNWERLGEDEEDKSLDDTETMSKGSTGRLRIHHAKLAQAGAYQCIVDNGVAPPARGLVRLVVRFAPQVEHPTPLTKVAAAGDSTSSATLHCRARGVPNIVFTWTKNGVPLDLEDPRYTEHTYHQGGVHSSLLTIANVSAAQDYALFTCTATNLLGSDHTNIQLVSISRPDPPLGLKVVSLTPHSVGLEWKHGFDGGLPQRFHIRYEALETPGFFYVDVLPPQATTFTLTGLQPSTRYRVWLLASNALGDSGLAAEGTQLSITTPGLDQPSGEPDDQLPTEHPAEPPGLPLLPVLFAVGGLLLLSNASCVGVFLWWRKLRHLAEGISEKTEAVSAEDQVRNEYEESQWTGDQDTRSSTVSTTEIEPYYHSLRDFSPQLPPTLEEVDYTQGFTGFEEEDVAFPEHLYDEVERMYAPPGAWGPPYDEVHMGSYDLHWAEDKYEGPGRIYDQVAGDSGPLESDSLPFELRGDLV